RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 BRAPQ7Z569 592 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 SPC24Q8NBT2 197 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 ALG1Q9BT22 464 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 MBD4O95243 580 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 TYRO3Q06418 890 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 SCRN1Q12765 414 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 RAB11FIP4Q86YS3 637 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 PAF1Q8N7H5 531 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 C2orf69Q8N8R5 385 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 STX8Q9UNK0 236 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 ABCC6O95255 1503 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 M0R2C6 588 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 OFD1O75665 1012 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 PDE6AP16499 860 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 IQCA1Q86XH1 822 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 LMO7Q8WWI1 1683 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 LTBP4Q8N2S1 1624 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF287Q9HBT7 754 aa9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF277Q9NRM2 450 aaPredicted RBP9.22□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF609O15014 1411 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 IQCA1LA6NCM1 817 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 PDIA3P30101 505 aaKnown RBP9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 ADD2P35612 726 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 PHKA1P46020 1223 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 HSP90AA2PQ14568 343 aaPredicted RBP9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 WTAPQ15007 396 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 STX1AQ16623 288 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 CT47A1Q5JQC4 288 aaPredicted RBP9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 OLFM4Q6UX06 510 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 NSUN7Q8NE18 718 aaKnown RBP9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 MRPS27Q92552 414 aaKnown RBP9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 VAT1LQ9HCJ6 419 aa9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 NOL7Q9UMY1 257 aaKnown RBP9.21□□□□□ -0.93
HLA-DMB-262ENST00000498020 CLRN2A0PK11 232 aa9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 SCNN1DP51172 638 aa9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 TBC1D10BQ4KMP7 808 aaPredicted RBP9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 ESR2Q92731 530 aa9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 ANKRD2Q9GZV1 360 aa9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 RIPOR2Q9Y4F9 1068 aa9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 USP54Q70EL1 1684 aa9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 MARCH10Q8NA82 808 aaPredicted RBP9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 CLSTN2Q9H4D0 955 aa9.21□□□□□ -0.94
HLA-DMB-262ENST00000498020 CAMTA1Q9Y6Y1 1673 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 B4E1Z4 1266 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 PATL2C9JE40 543 aaKnown RBP9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 RFX1P22670 979 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 SYNE4Q8N205 404 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 PAGR1Q9BTK6 254 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 ANO6Q4KMQ2 910 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 SLC26A6Q9BXS9 759 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 PUS7LQ9H0K6 701 aaKnown RBP9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 DENND2AQ9ULE3 1009 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 MAGEB6P1A0A0J9YX57 407 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 TCP10L2B9ZVM9 353 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 SPTLC2O15270 562 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 LDHBP07195 334 aaKnown RBP9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 IRX3P78415 501 aaPredicted RBP9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 DHX8Q14562 1220 aaKnown RBP9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 RTN1Q16799 776 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 CIAPIN1Q6FI81 312 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 PI16Q6UXB8 463 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 CCDC144CPQ8IYA2 1237 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 PLCD3Q8N3E9 789 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 TTC16Q8NEE8 873 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 CEP131Q9UPN4 1083 aa9.2□□□□□ -0.94
HLA-DMB-262ENST00000498020 MCAMP43121 646 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 SUSD4Q5VX71 490 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 ARMT1Q9H993 441 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 ODF2Q5BJF6 829 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 C9orf131Q5VYM1 1079 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 CATIPQ7Z7H3 387 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 SLC10A4Q96EP9 437 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 PRKAG2Q9UGJ0 569 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 SMTNL1A8MU46 457 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 LIG1P18858 919 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 CDR1P51861 262 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 SLFNL1Q499Z3 407 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 MIGA1Q8NAN2 632 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 SLC16A10Q8TF71 515 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 TMOD4Q9NZQ9 345 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 EIF5P55010 431 aaKnown RBP9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 FAM160A1Q05DH4 1040 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 ZNF34Q8IZ26 560 aa9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 CRNKL1Q9BZJ0 848 aaKnown RBP9.19□□□□□ -0.94
HLA-DMB-262ENST00000498020 RPS6KA4O75676 772 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 HIBADHP31937 336 aaKnown RBP9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 NAP1L1P55209 391 aaKnown RBP9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 SETQ01105 290 aaPredicted RBP9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 RESTQ13127 1097 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 CLEC4GQ6UXB4 293 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 IFNL3Q8IZI9 196 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 ZNF512BQ96KM6 892 aaPredicted RBP9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 TTF2Q9UNY4 1162 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms