RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 MAGEB6Q8N7X4 407 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 WRNIP1Q96S55 665 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 HAUS7Q99871 368 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 PICK1Q9NRD5 415 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 AATFQ9NY61 560 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPRN-218ENST00000497977 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
PTPRN-218ENST00000497977 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.57□□□□□ -0.4
PTPRN-218ENST00000497977 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
PTPRN-218ENST00000497977 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 TTC41PQ6P2S7 1318 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 MAGEB6P1A0A0J9YX57 407 aa12.56□□□□□ -0.4
PTPRN-218ENST00000497977 GLRX3O76003 335 aaKnown RBP12.56□□□□□ -0.4
PTPRN-218ENST00000497977 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
PTPRN-218ENST00000497977 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
PTPRN-218ENST00000497977 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
PTPRN-218ENST00000497977 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTPRN-218ENST00000497977 OPTNQ96CV9 577 aa12.56□□□□□ -0.4
PTPRN-218ENST00000497977 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
PTPRN-218ENST00000497977 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTPRN-218ENST00000497977 FAM198AQ9UFP1 575 aa12.56□□□□□ -0.4
PTPRN-218ENST00000497977 RPAP1Q9BWH6 1393 aaPredicted RBP12.56□□□□□ -0.4
PTPRN-218ENST00000497977 FOXN1O15353 648 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
PTPRN-218ENST00000497977 TRPA1O75762 1119 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 CETPP11597 493 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 RHBDL3P58872 404 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 NFIAQ12857 509 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 SNAPC2Q13487 334 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 TGFBRAP1Q8WUH2 860 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 WNK4Q96J92 1243 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 OSBPL5Q9H0X9 879 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-218ENST00000497977 ELP3Q9H9T3 547 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
PTPRN-218ENST00000497977 GINM1Q9NU53 330 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 ZNF112Q9UJU3 913 aa12.55□□□□□ -0.4
PTPRN-218ENST00000497977 LBX1P52954 281 aa12.54□□□□□ -0.4
PTPRN-218ENST00000497977 MAP3K10Q02779 954 aa12.54□□□□□ -0.4
PTPRN-218ENST00000497977 UBE3CQ15386 1083 aa12.54□□□□□ -0.4
PTPRN-218ENST00000497977 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
PTPRN-218ENST00000497977 RNF186Q9NXI6 227 aa12.54□□□□□ -0.4
PTPRN-218ENST00000497977 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
PTPRN-218ENST00000497977 CXCL11O14625 94 aa12.53□□□□□ -0.4
PTPRN-218ENST00000497977 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-218ENST00000497977 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-218ENST00000497977 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
PTPRN-218ENST00000497977 VGLL4Q14135 290 aa12.53□□□□□ -0.4
PTPRN-218ENST00000497977 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-218ENST00000497977 FASTKD5Q7L8L6 764 aaKnown RBP12.53□□□□□ -0.4
PTPRN-218ENST00000497977 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
PTPRN-218ENST00000497977 ZCCHC17Q9NP64 241 aaKnown RBP12.53□□□□□ -0.4
PTPRN-218ENST00000497977 ATP8A2Q9NTI2 1148 aa12.53□□□□□ -0.4
PTPRN-218ENST00000497977 AOX1Q06278 1338 aa12.53□□□□□ -0.4
PTPRN-218ENST00000497977 SCN9AQ15858 1988 aa12.52□□□□□ -0.4
PTPRN-218ENST00000497977 PDE6AP16499 860 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 GNAT2P19087 354 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 PPIL2Q13356 520 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 NOM1Q5C9Z4 860 aaKnown RBP12.52□□□□□ -0.41
PTPRN-218ENST00000497977 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.41
PTPRN-218ENST00000497977 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 SCYL3Q8IZE3 742 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.41
PTPRN-218ENST00000497977 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 AS3MTQ9HBK9 375 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 ZFYVE28Q9HCC9 887 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
PTPRN-218ENST00000497977 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
PTPRN-218ENST00000497977 DDTLA6NHG4 134 aaPredicted RBP12.51□□□□□ -0.41
PTPRN-218ENST00000497977 HSPA8P11142 646 aaKnown RBP12.51□□□□□ -0.41
PTPRN-218ENST00000497977 MX1P20591 662 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 MAPKAPK5Q8IW41 473 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 ZFPM1Q8IX07 1006 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 TNS4Q8IZW8 715 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 KBTBD3Q8NAB2 608 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 MIGA1Q8NAN2 632 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 CLMNQ96JQ2 1002 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 CFHR5Q9BXR6 569 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
PTPRN-218ENST00000497977 PCNTO95613 3336 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 CCL15-CCL14A0A0B4J2E2 113 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 ASNSP08243 561 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 ADD2P35612 726 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRN-218ENST00000497977 PKN2Q16513 984 aaKnown RBP12.5□□□□□ -0.41
PTPRN-218ENST00000497977 CCL15Q16663 113 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 ZNF384Q8TF68 577 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 EVI5LQ96CN4 794 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 NACAP1Q9BZK3 213 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 ZNF287Q9HBT7 754 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 DDX4Q9NQI0 724 aaKnown RBP12.5□□□□□ -0.41
PTPRN-218ENST00000497977 SERPINB13Q9UIV8 391 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 FZD1Q9UP38 647 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 ZHX2Q9Y6X8 837 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 ATRNL1Q5VV63 1379 aa12.5□□□□□ -0.41
PTPRN-218ENST00000497977 FLT1P17948 1338 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 PHF20L1A8MW92 1017 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 RNF113AO15541 343 aaKnown RBP12.49□□□□□ -0.41
PTPRN-218ENST00000497977 DYNLL1P63167 89 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms