RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 ZFP42Q96MM3 310 aa7.84□□□□□ -1.15
SIK3-213ENST00000497049 NLRP3Q96P20 1036 aa7.84□□□□□ -1.15
SIK3-213ENST00000497049 CCDC85AQ96PX6 553 aaPredicted RBP7.84□□□□□ -1.15
SIK3-213ENST00000497049 PURBQ96QR8 312 aaKnown RBP7.84□□□□□ -1.15
SIK3-213ENST00000497049 DCTPP1Q9H773 170 aa7.84□□□□□ -1.15
SIK3-213ENST00000497049 GMPR2Q9P2T1 348 aaKnown RBP7.84□□□□□ -1.15
SIK3-213ENST00000497049 PARP3Q9Y6F1 533 aa7.84□□□□□ -1.15
SIK3-213ENST00000497049 CARMIL3Q8ND23 1372 aa7.84□□□□□ -1.16
SIK3-213ENST00000497049 HMMRO75330 724 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 IGHDP01880 384 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 MMP10P09238 476 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 HCLS1P14317 486 aaPredicted RBP7.83□□□□□ -1.16
SIK3-213ENST00000497049 PTGIRP43119 386 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 DDR1Q08345 913 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 R3HDM1Q15032 1099 aaKnown RBP7.83□□□□□ -1.16
SIK3-213ENST00000497049 EPHA10Q5JZY3 1008 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 LMBR1LQ6UX01 489 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 CCDC136Q96JN2 1154 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 BRIP1Q9BX63 1249 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 PDGFDQ9GZP0 370 aaPredicted RBP7.83□□□□□ -1.16
SIK3-213ENST00000497049 MTFR1LQ9H019 292 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 BICC1Q9H694 974 aaKnown RBP7.83□□□□□ -1.16
SIK3-213ENST00000497049 DACH1Q9UI36 760 aa7.83□□□□□ -1.16
SIK3-213ENST00000497049 PNMA6EA0A0J9YXQ4 647 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 FAM177BA6PVY3 158 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 SRGAP3O43295 1099 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 SKIP12755 728 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 GPC1P35052 558 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 ST5P78524 1137 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 CCDC152Q4G0S7 254 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 C6orf118Q5T5N4 469 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 PRR5LQ6MZQ0 368 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 UBR3Q6ZT12 1888 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 PLEKHM2Q8IWE5 1019 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 CNBD1Q8NA66 436 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 GCC1Q96CN9 775 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 C1orf115Q9H7X2 142 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 COPRSQ9NQ92 184 aa7.82□□□□□ -1.16
SIK3-213ENST00000497049 NUP98P52948 1817 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 TTLL8A6PVC2 850 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 ATP9BO43861 1147 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 RAB11FIP3O75154 756 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 HOXA10P31260 410 aaPredicted RBP7.81□□□□□ -1.16
SIK3-213ENST00000497049 PDE6BP35913 854 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 RFX5P48382 616 aaPredicted RBP7.81□□□□□ -1.16
SIK3-213ENST00000497049 CTSWP56202 376 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 RELBQ01201 579 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 IFIT5Q13325 482 aaKnown RBP7.81□□□□□ -1.16
SIK3-213ENST00000497049 CCDC57Q2TAC2 916 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 CRY2Q49AN0 593 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 HSP90AB4PQ58FF6 505 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 OXLD1Q5BKU9 147 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 TRIM50Q86XT4 487 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 SMC5Q8IY18 1101 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 ADAMTS19Q8TE59 1207 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 NOD1Q9Y239 953 aa7.81□□□□□ -1.16
SIK3-213ENST00000497049 ANKRD18BA2A2Z9 1011 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 USP17L5A8MUK1 530 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 NPHP1O15259 732 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 MAN1A2O60476 641 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 BBOX1O75936 387 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 POLD1P28340 1107 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 ADD1P35611 737 aaKnown RBP7.8□□□□□ -1.16
SIK3-213ENST00000497049 SCTRP47872 440 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 RPS8P62241 208 aaKnown RBP7.8□□□□□ -1.16
SIK3-213ENST00000497049 PTPN12Q05209 780 aaKnown RBP7.8□□□□□ -1.16
SIK3-213ENST00000497049 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.8□□□□□ -1.163e-6■■□□□ 13.8
SIK3-213ENST00000497049 MSL1Q68DK7 614 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 CENPQQ7L2Z9 268 aaPredicted RBP7.8□□□□□ -1.16
SIK3-213ENST00000497049 CRAMP1Q96RY5 1269 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 OSBPL3Q9H4L5 887 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 RTL9Q8NET4 1388 aa7.8□□□□□ -1.16
SIK3-213ENST00000497049 KDM2BQ8NHM5 1336 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 NUP188Q5SRE5 1749 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 SURF6O75683 361 aaKnown RBP7.79□□□□□ -1.16
SIK3-213ENST00000497049 CIAO1O76071 339 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 ZBTB7AO95365 584 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 SRGNP10124 158 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 ITGA6P23229 1130 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 ALDH1B1P30837 517 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 ATP1A2P50993 1020 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 TGFB2P61812 414 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 G3BP1Q13283 466 aaKnown RBP eCLIP7.79□□□□□ -1.16
SIK3-213ENST00000497049 CLN3Q13286 438 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 B4GALNT3Q6L9W6 998 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 DDX46Q7L014 1031 aaKnown RBP7.79□□□□□ -1.16
SIK3-213ENST00000497049 RBM17Q96I25 401 aaKnown RBP7.79□□□□□ -1.16
SIK3-213ENST00000497049 GREM2Q9H772 168 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 POLMQ9NP87 494 aaPredicted RBP7.79□□□□□ -1.16
SIK3-213ENST00000497049 RIPOR2Q9Y4F9 1068 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 ARFGEF2Q9Y6D5 1785 aa7.79□□□□□ -1.16
SIK3-213ENST00000497049 RIC1Q4ADV7 1423 aa7.78□□□□□ -1.16
SIK3-213ENST00000497049 H0YIN7 160 aa7.78□□□□□ -1.16
SIK3-213ENST00000497049 EYA2O00167 538 aa7.78□□□□□ -1.16
SIK3-213ENST00000497049 PIK3CDO00329 1044 aa7.78□□□□□ -1.16
SIK3-213ENST00000497049 NPR1P16066 1061 aa7.78□□□□□ -1.16
SIK3-213ENST00000497049 IL15P40933 162 aaPredicted RBP7.78□□□□□ -1.16
SIK3-213ENST00000497049 LDHAL6AQ6ZMR3 332 aa7.78□□□□□ -1.16
SIK3-213ENST00000497049 ERC1Q8IUD2 1116 aa7.78□□□□□ -1.16
SIK3-213ENST00000497049 NPAS3Q8IXF0 933 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms