RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
SRSF4-205ENST00000497015 TDHQ8IZJ6 230 aa12.39□□□□□ -0.43
SRSF4-205ENST00000497015 PXYLP1Q8TE99 480 aa12.39□□□□□ -0.43
SRSF4-205ENST00000497015 VAMP4O75379 141 aa12.38□□□□□ -0.43
SRSF4-205ENST00000497015 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
SRSF4-205ENST00000497015 HIBADHP31937 336 aaKnown RBP12.38□□□□□ -0.43
SRSF4-205ENST00000497015 FCGRTP55899 365 aa12.38□□□□□ -0.43
SRSF4-205ENST00000497015 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
SRSF4-205ENST00000497015 STK24Q9Y6E0 443 aa12.38□□□□□ -0.43
SRSF4-205ENST00000497015 LAMA2P24043 3122 aaKnown RBP12.38□□□□□ -0.43
SRSF4-205ENST00000497015 CT47B1P0C2W7 299 aaPredicted RBP12.37□□□□□ -0.43
SRSF4-205ENST00000497015 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
SRSF4-205ENST00000497015 SLFN5Q08AF3 891 aa12.37□□□□□ -0.43
SRSF4-205ENST00000497015 IFIT5Q13325 482 aaKnown RBP12.37□□□□□ -0.43
SRSF4-205ENST00000497015 IRF5Q13568 498 aa12.37□□□□□ -0.43
SRSF4-205ENST00000497015 NECAB2Q7Z6G3 386 aa12.37□□□□□ -0.43
SRSF4-205ENST00000497015 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
SRSF4-205ENST00000497015 TRMT2AQ8IZ69 625 aaKnown RBP12.37□□□□□ -0.43
SRSF4-205ENST00000497015 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
SRSF4-205ENST00000497015 PRDM6Q9NQX0 595 aa12.37□□□□□ -0.43
SRSF4-205ENST00000497015 IQSEC3Q9UPP2 1182 aaPredicted RBP12.37□□□□□ -0.43
SRSF4-205ENST00000497015 A0A1B0GUL6 1792 aa12.37□□□□□ -0.43
SRSF4-205ENST00000497015 HDLBPQ00341 1268 aaKnown RBP12.36□□□□□ -0.43
SRSF4-205ENST00000497015 TRIM32Q13049 653 aa12.36□□□□□ -0.43
SRSF4-205ENST00000497015 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
SRSF4-205ENST00000497015 LDHAL6AQ6ZMR3 332 aa12.36□□□□□ -0.43
SRSF4-205ENST00000497015 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
SRSF4-205ENST00000497015 ZNF341Q9BYN7 854 aa12.36□□□□□ -0.43
SRSF4-205ENST00000497015 PRUNE2Q8WUY3 3088 aa12.35□□□□□ -0.43
SRSF4-205ENST00000497015 SLURP2P0DP57 97 aa12.35□□□□□ -0.43
SRSF4-205ENST00000497015 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
SRSF4-205ENST00000497015 FKBP1CQ5VVH2 108 aa12.35□□□□□ -0.43
SRSF4-205ENST00000497015 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
SRSF4-205ENST00000497015 MRIQ9BWK5 157 aa12.35□□□□□ -0.43
SRSF4-205ENST00000497015 MGAMO43451 1857 aa12.34□□□□□ -0.43
SRSF4-205ENST00000497015 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
SRSF4-205ENST00000497015 CXCL11O14625 94 aa12.34□□□□□ -0.43
SRSF4-205ENST00000497015 CAPN2P17655 700 aa12.34□□□□□ -0.43
SRSF4-205ENST00000497015 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
SRSF4-205ENST00000497015 LINS1Q8NG48 757 aa12.34□□□□□ -0.43
SRSF4-205ENST00000497015 FAM161BQ96MY7 647 aa12.34□□□□□ -0.43
SRSF4-205ENST00000497015 PARK7Q99497 189 aaKnown RBP12.34□□□□□ -0.43
SRSF4-205ENST00000497015 UBE2OQ9C0C9 1292 aaKnown RBP12.34□□□□□ -0.43
SRSF4-205ENST00000497015 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.34□□□□□ -0.43
SRSF4-205ENST00000497015 PFASO15067 1338 aa12.34□□□□□ -0.43
SRSF4-205ENST00000497015 RPTORQ8N122 1335 aa12.34□□□□□ -0.43
SRSF4-205ENST00000497015 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
SRSF4-205ENST00000497015 DCAF15Q66K64 600 aa12.33□□□□□ -0.44
SRSF4-205ENST00000497015 FAM109BQ6ICB4 259 aaPredicted RBP12.33□□□□□ -0.44
SRSF4-205ENST00000497015 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
SRSF4-205ENST00000497015 TEKT1Q969V4 418 aa12.33□□□□□ -0.44
SRSF4-205ENST00000497015 GJD2Q9UKL4 321 aa12.33□□□□□ -0.44
SRSF4-205ENST00000497015 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
SRSF4-205ENST00000497015 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
SRSF4-205ENST00000497015 A0A0G2JLL6 359 aaPredicted RBP12.32□□□□□ -0.44
SRSF4-205ENST00000497015 TNPO2O14787 897 aaKnown RBP12.32□□□□□ -0.44
SRSF4-205ENST00000497015 TCP10Q12799 353 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 NFIAQ12857 509 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 FLIIQ13045 1269 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 PRRT2Q7Z6L0 340 aaPredicted RBP12.32□□□□□ -0.44
SRSF4-205ENST00000497015 ANKLE1Q8NAG6 615 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 FAM151AQ8WW52 585 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
SRSF4-205ENST00000497015 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 RAPGEFL1Q9UHV5 662 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 ZBED9Q6R2W3 1325 aa12.32□□□□□ -0.44
SRSF4-205ENST00000497015 F6X3S4 739 aa12.31□□□□□ -0.44
SRSF4-205ENST00000497015 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
SRSF4-205ENST00000497015 BEND3Q5T5X7 828 aa12.31□□□□□ -0.44
SRSF4-205ENST00000497015 CDC42EP5Q6NZY7 148 aa12.31□□□□□ -0.44
SRSF4-205ENST00000497015 HHIPL2Q6UWX4 724 aa12.31□□□□□ -0.44
SRSF4-205ENST00000497015 KAZALD1Q96I82 304 aa12.31□□□□□ -0.44
SRSF4-205ENST00000497015 C11orf49Q9H6J7 331 aa12.31□□□□□ -0.44
SRSF4-205ENST00000497015 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.31□□□□□ -0.44
SRSF4-205ENST00000497015 OGDHLQ9ULD0 1010 aa12.31□□□□□ -0.44
SRSF4-205ENST00000497015 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
SRSF4-205ENST00000497015 DOCK3Q8IZD9 2030 aa12.3□□□□□ -0.44
SRSF4-205ENST00000497015 COL2A1P02458 1487 aaPredicted RBP12.3□□□□□ -0.44
SRSF4-205ENST00000497015 COL6A1P12109 1028 aa12.3□□□□□ -0.44
SRSF4-205ENST00000497015 PTPRAP18433 802 aa12.3□□□□□ -0.44
SRSF4-205ENST00000497015 HNRNPUQ00839 825 aaKnown RBP eCLIP12.3□□□□□ -0.44
SRSF4-205ENST00000497015 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
SRSF4-205ENST00000497015 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
SRSF4-205ENST00000497015 HOOK2Q96ED9 719 aa12.3□□□□□ -0.44
SRSF4-205ENST00000497015 PTPRCP08575 1304 aa12.3□□□□□ -0.44
SRSF4-205ENST00000497015 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
SRSF4-205ENST00000497015 MUC3AQ02505 3323 aa12.29□□□□□ -0.44
SRSF4-205ENST00000497015 COL9A1P20849 921 aa12.29□□□□□ -0.44
SRSF4-205ENST00000497015 FKBP5Q13451 457 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-205ENST00000497015 LRRC26Q2I0M4 334 aa12.29□□□□□ -0.44
SRSF4-205ENST00000497015 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
SRSF4-205ENST00000497015 SH3BP5LQ7L8J4 393 aa12.29□□□□□ -0.44
SRSF4-205ENST00000497015 FASTKD5Q7L8L6 764 aaKnown RBP12.29□□□□□ -0.44
SRSF4-205ENST00000497015 CCDC84Q86UT8 332 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-205ENST00000497015 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms