RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
SH3D21-204ENST00000496636 PDE8BO95263 885 aa12.16□□□□□ -0.46
SH3D21-204ENST00000496636 IFIT1P09914 478 aaKnown RBP12.16□□□□□ -0.46
SH3D21-204ENST00000496636 TCP10Q12799 353 aa12.16□□□□□ -0.46
SH3D21-204ENST00000496636 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
SH3D21-204ENST00000496636 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
SH3D21-204ENST00000496636 WWC1Q8IX03 1113 aa12.16□□□□□ -0.46
SH3D21-204ENST00000496636 C11orf49Q9H6J7 331 aa12.16□□□□□ -0.46
SH3D21-204ENST00000496636 DAGLAQ9Y4D2 1042 aa12.16□□□□□ -0.46
SH3D21-204ENST00000496636 SPTBN5Q9NRC6 3674 aaKnown RBP12.16□□□□□ -0.46
SH3D21-204ENST00000496636 CACNA1FO60840 1977 aa12.16□□□□□ -0.46
SH3D21-204ENST00000496636 MGAMO43451 1857 aa12.15□□□□□ -0.46
SH3D21-204ENST00000496636 PTPRAP18433 802 aa12.15□□□□□ -0.46
SH3D21-204ENST00000496636 NFIAQ12857 509 aa12.15□□□□□ -0.46
SH3D21-204ENST00000496636 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
SH3D21-204ENST00000496636 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
SH3D21-204ENST00000496636 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
SH3D21-204ENST00000496636 SRCIN1Q9C0H9 1055 aa12.15□□□□□ -0.46
SH3D21-204ENST00000496636 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.46
SH3D21-204ENST00000496636 HMX1Q9NP08 348 aaPredicted RBP12.15□□□□□ -0.46
SH3D21-204ENST00000496636 AGTPBP1Q9UPW5 1226 aa12.15□□□□□ -0.46
SH3D21-204ENST00000496636 AFG3L2Q9Y4W6 797 aa12.15□□□□□ -0.46
SH3D21-204ENST00000496636 ENTPD3O75355 529 aa12.14□□□□□ -0.47
SH3D21-204ENST00000496636 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
SH3D21-204ENST00000496636 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
SH3D21-204ENST00000496636 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
SH3D21-204ENST00000496636 SUCLG2Q96I99 432 aa12.14□□□□□ -0.47
SH3D21-204ENST00000496636 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
SH3D21-204ENST00000496636 OGDHLQ9ULD0 1010 aa12.14□□□□□ -0.47
SH3D21-204ENST00000496636 LRRFIP2Q9Y608 721 aaKnown RBP12.14□□□□□ -0.47
SH3D21-204ENST00000496636 ALPK3Q96L96 1907 aa12.13□□□□□ -0.47
SH3D21-204ENST00000496636 LAMA2P24043 3122 aaKnown RBP12.13□□□□□ -0.47
SH3D21-204ENST00000496636 PHF20L1A8MW92 1017 aa12.13□□□□□ -0.47
SH3D21-204ENST00000496636 VAMP4O75379 141 aa12.13□□□□□ -0.47
SH3D21-204ENST00000496636 SYN1P17600 705 aa12.13□□□□□ -0.47
SH3D21-204ENST00000496636 PABPC4Q13310 644 aaKnown RBP eCLIP12.13□□□□□ -0.47
SH3D21-204ENST00000496636 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
SH3D21-204ENST00000496636 ANKRD13CQ8N6S4 541 aa12.13□□□□□ -0.47
SH3D21-204ENST00000496636 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
SH3D21-204ENST00000496636 UTYO14607 1347 aa12.12□□□□□ -0.47
SH3D21-204ENST00000496636 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
SH3D21-204ENST00000496636 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
SH3D21-204ENST00000496636 SLC5A1P13866 664 aa12.12□□□□□ -0.47
SH3D21-204ENST00000496636 LRRC24Q50LG9 513 aa12.12□□□□□ -0.47
SH3D21-204ENST00000496636 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
SH3D21-204ENST00000496636 KAZALD1Q96I82 304 aa12.12□□□□□ -0.47
SH3D21-204ENST00000496636 IDI2Q9BXS1 227 aa12.12□□□□□ -0.47
SH3D21-204ENST00000496636 BICC1Q9H694 974 aaKnown RBP12.12□□□□□ -0.47
SH3D21-204ENST00000496636 USP40Q9NVE5 1235 aa12.12□□□□□ -0.47
SH3D21-204ENST00000496636 RFX7Q2KHR2 1363 aa12.12□□□□□ -0.47
SH3D21-204ENST00000496636 COL2A1P02458 1487 aaPredicted RBP12.12□□□□□ -0.47
SH3D21-204ENST00000496636 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 LDHBP07195 334 aaKnown RBP12.11□□□□□ -0.47
SH3D21-204ENST00000496636 FGFR2P21802 821 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 RGS3P49796 1198 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 SLC4A10Q6U841 1118 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 LPIN2Q92539 896 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 GNL3LQ9NVN8 582 aaKnown RBP12.11□□□□□ -0.47
SH3D21-204ENST00000496636 DOCK2Q92608 1830 aa12.11□□□□□ -0.47
SH3D21-204ENST00000496636 SEMA3EO15041 775 aa12.1□□□□□ -0.47
SH3D21-204ENST00000496636 PRDX5P30044 214 aa12.1□□□□□ -0.47
SH3D21-204ENST00000496636 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
SH3D21-204ENST00000496636 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
SH3D21-204ENST00000496636 TRMT44Q8IYL2 757 aaKnown RBP12.1□□□□□ -0.47
SH3D21-204ENST00000496636 ZGPATQ8N5A5 531 aaKnown RBP12.1□□□□□ -0.47
SH3D21-204ENST00000496636 GUCD1Q96NT3 240 aa12.1□□□□□ -0.47
SH3D21-204ENST00000496636 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
SH3D21-204ENST00000496636 GAKO14976 1311 aa12.1□□□□□ -0.47
SH3D21-204ENST00000496636 PFASO15067 1338 aa12.1□□□□□ -0.47
SH3D21-204ENST00000496636 DOCK1Q14185 1865 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 NBPF7P0C2Y1 421 aaPredicted RBP12.09□□□□□ -0.47
SH3D21-204ENST00000496636 COL6A1P12109 1028 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
SH3D21-204ENST00000496636 EXOSC9Q06265 439 aaKnown RBP12.09□□□□□ -0.47
SH3D21-204ENST00000496636 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 ZNF697Q5TEC3 545 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 SLF2Q8IX21 1173 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 ANKRD44Q8N8A2 993 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 PRDM6Q9NQX0 595 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 GJD2Q9UKL4 321 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 EYSQ5T1H1 3165 aa12.09□□□□□ -0.47
SH3D21-204ENST00000496636 PTPRFP10586 1907 aa12.08□□□□□ -0.48
SH3D21-204ENST00000496636 ZBTB22O15209 634 aa12.08□□□□□ -0.48
SH3D21-204ENST00000496636 XRCC5P13010 732 aaKnown RBP12.08□□□□□ -0.48
SH3D21-204ENST00000496636 WDR63Q8IWG1 891 aa12.08□□□□□ -0.48
SH3D21-204ENST00000496636 ZFPM1Q8IX07 1006 aa12.08□□□□□ -0.48
SH3D21-204ENST00000496636 TRIB2Q92519 343 aa12.08□□□□□ -0.48
SH3D21-204ENST00000496636 LBHD1Q9BQE6 289 aaPredicted RBP12.08□□□□□ -0.48
SH3D21-204ENST00000496636 MORF4L1Q9UBU8 362 aa12.08□□□□□ -0.48
SH3D21-204ENST00000496636 DENND2AQ9ULE3 1009 aa12.08□□□□□ -0.48
SH3D21-204ENST00000496636 MUC3AQ02505 3323 aa12.08□□□□□ -0.48
SH3D21-204ENST00000496636 EYA2O00167 538 aa12.07□□□□□ -0.48
SH3D21-204ENST00000496636 TBC1D12O60347 775 aa12.07□□□□□ -0.48
SH3D21-204ENST00000496636 ZKSCAN1P17029 563 aaPredicted RBP12.07□□□□□ -0.48
SH3D21-204ENST00000496636 TRIM32Q13049 653 aa12.07□□□□□ -0.48
SH3D21-204ENST00000496636 PDE3AQ14432 1141 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms