RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 GOLGA6L19H0YKK7 550 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 FAM160A1Q05DH4 1040 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 CCDC144BQ3MJ40 725 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 PARP10Q53GL7 1025 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 BCL2L12Q9HB09 334 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 MINPP1Q9UNW1 487 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 UBAP1LF5GYI3 381 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 NR5A1Q13285 461 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 DPCR1Q3MIW9 517 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 NBPF5PQ86XG9 351 aaPredicted RBP14.3□□□□□ -0.12
PDE6B-212ENST00000496514 ENGASEQ8NFI3 743 aa14.3□□□□□ -0.12
PDE6B-212ENST00000496514 AATFQ9NY61 560 aaKnown RBP eCLIP14.3□□□□□ -0.12
PDE6B-212ENST00000496514 GRIN1Q05586 938 aa14.29□□□□□ -0.12
PDE6B-212ENST00000496514 ANO1Q5XXA6 986 aa14.29□□□□□ -0.12
PDE6B-212ENST00000496514 FAM205CA6NFA0 338 aa14.29□□□□□ -0.12
PDE6B-212ENST00000496514 PRDX5P30044 214 aa14.29□□□□□ -0.12
PDE6B-212ENST00000496514 EVCP57679 992 aa14.29□□□□□ -0.12
PDE6B-212ENST00000496514 ZNF384Q8TF68 577 aa14.29□□□□□ -0.12
PDE6B-212ENST00000496514 CDC5LQ99459 802 aaKnown RBP14.29□□□□□ -0.12
PDE6B-212ENST00000496514 CYP2D6P10635 497 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 FAM47AQ5JRC9 791 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 CLIP2Q9UDT6 1046 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 ZNF652Q9Y2D9 606 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 MYH7P12883 1935 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 MAGEB6P1A0A0J9YX57 407 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 PFKFB1P16118 471 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 ZNF75DP51815 510 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 PPARAQ07869 468 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 WTAPQ15007 396 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 FMR1NBQ8N0W7 255 aaPredicted RBP14.28□□□□□ -0.12
PDE6B-212ENST00000496514 OXER1Q8TDS5 423 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
PDE6B-212ENST00000496514 FAM84BQ96KN1 310 aaPredicted RBP14.28□□□□□ -0.12
PDE6B-212ENST00000496514 RTEL1Q9NZ71 1219 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 FOXN1O15353 648 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 NTRK3Q16288 839 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 PDILTQ8N807 584 aa14.28□□□□□ -0.12
PDE6B-212ENST00000496514 ZNF512BQ96KM6 892 aaPredicted RBP14.28□□□□□ -0.12
PDE6B-212ENST00000496514 COL1A1P02452 1464 aaPredicted RBP14.27□□□□□ -0.12
PDE6B-212ENST00000496514 NACAP1Q9BZK3 213 aa14.27□□□□□ -0.12
PDE6B-212ENST00000496514 ZNF202O95125 648 aa14.27□□□□□ -0.13
PDE6B-212ENST00000496514 TRIM29Q14134 588 aa14.27□□□□□ -0.13
PDE6B-212ENST00000496514 IPO4Q8TEX9 1081 aaKnown RBP14.27□□□□□ -0.13
PDE6B-212ENST00000496514 SSRP1Q08945 709 aaKnown RBP14.26□□□□□ -0.13
PDE6B-212ENST00000496514 IQCB1Q15051 598 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 NOM1Q5C9Z4 860 aaKnown RBP14.26□□□□□ -0.13
PDE6B-212ENST00000496514 ADALQ6DHV7 355 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 RBM43Q6ZSC3 357 aaKnown RBP14.26□□□□□ -0.13
PDE6B-212ENST00000496514 SETDB2Q96T68 719 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 UBAC1Q9BSL1 405 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 CCNL1Q9UK58 526 aaPredicted RBP14.26□□□□□ -0.13
PDE6B-212ENST00000496514 ANKRD36CQ5JPF3 1778 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 ZPR1O75312 459 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 ZRSR1Q15695 479 aaKnown RBP14.26□□□□□ -0.13
PDE6B-212ENST00000496514 STX1AQ16623 288 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 RTN1Q16799 776 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 CAVIN4Q5BKX8 364 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 CPLX2Q6PUV4 134 aaKnown RBP14.26□□□□□ -0.13
PDE6B-212ENST00000496514 CDCA7Q9BWT1 371 aaPredicted RBP14.26□□□□□ -0.13
PDE6B-212ENST00000496514 TNKSO95271 1327 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 ERICH2A1L162 156 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 USP17L21D6R901 530 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 PNOCQ13519 176 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 GRAMD1CQ8IYS0 662 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 C16orf45Q96MC5 204 aaPredicted RBP14.26□□□□□ -0.13
PDE6B-212ENST00000496514 PDCL3Q9H2J4 239 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 VPS54Q9P1Q0 977 aa14.26□□□□□ -0.13
PDE6B-212ENST00000496514 PLCH1Q4KWH8 1693 aa14.25□□□□□ -0.13
PDE6B-212ENST00000496514 DHX40Q8IX18 779 aaKnown RBP14.25□□□□□ -0.13
PDE6B-212ENST00000496514 THRAP3Q9Y2W1 955 aaKnown RBP14.25□□□□□ -0.13
PDE6B-212ENST00000496514 AXDND1Q5T1B0 1012 aaPredicted RBP14.25□□□□□ -0.13
PDE6B-212ENST00000496514 DIS3L2Q8IYB7 885 aaKnown RBP14.25□□□□□ -0.13
PDE6B-212ENST00000496514 CACTINQ8WUQ7 758 aaKnown RBP14.25□□□□□ -0.13
PDE6B-212ENST00000496514 TMEM87BQ96K49 555 aa14.25□□□□□ -0.13
PDE6B-212ENST00000496514 PLEKHA8P1O95397 391 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 RPS8P62241 208 aaKnown RBP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 SHC4Q6S5L8 630 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 ZNF654Q8IZM8 581 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 TDRD7Q8NHU6 1098 aaKnown RBP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 LMOD1P29536 600 aaPredicted RBP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 ARHGEF1Q92888 912 aaKnown RBP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 SMARCC1Q92922 1105 aaPredicted RBP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 SMC2O95347 1197 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 SLC3A2P08195 630 aaKnown RBP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 VEGFAP15692 232 aaPredicted RBP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 MECOMQ03112 1051 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 ZNF827Q17R98 1081 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 USP49Q70CQ1 688 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 KCNG4Q8TDN1 519 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 NLRP3Q96P20 1036 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 POLR3EQ9NVU0 708 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 TRMT1Q9NXH9 659 aaKnown RBP14.24□□□□□ -0.13
PDE6B-212ENST00000496514 ANKIB1Q9P2G1 1089 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 UTRNP46939 3433 aa14.24□□□□□ -0.13
PDE6B-212ENST00000496514 PHLPP1O60346 1717 aa14.23□□□□□ -0.13
PDE6B-212ENST00000496514 NFIXQ14938 502 aa14.23□□□□□ -0.13
PDE6B-212ENST00000496514 DIXDC1Q155Q3 683 aa14.23□□□□□ -0.13
PDE6B-212ENST00000496514 GRIK5Q16478 980 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms