RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 WRNIP1Q96S55 665 aa19.85■□□□□ 0.77
SF3A1-209ENST00000496189 ANTXR1Q9H6X2 564 aa19.85■□□□□ 0.77
SF3A1-209ENST00000496189 ERC2O15083 957 aa19.84■□□□□ 0.77
SF3A1-209ENST00000496189 FOXN1O15353 648 aa19.84■□□□□ 0.77
SF3A1-209ENST00000496189 WDHD1O75717 1129 aaPredicted RBP19.84■□□□□ 0.77
SF3A1-209ENST00000496189 RHBDL3P58872 404 aa19.84■□□□□ 0.77
SF3A1-209ENST00000496189 PPP4CP60510 307 aa19.84■□□□□ 0.77
SF3A1-209ENST00000496189 SLC9C2Q5TAH2 1124 aa19.84■□□□□ 0.77
SF3A1-209ENST00000496189 SPRYD7Q5W111 196 aa19.84■□□□□ 0.77
SF3A1-209ENST00000496189 HAUS7Q99871 368 aa19.84■□□□□ 0.77
SF3A1-209ENST00000496189 MKRN3Q13064 507 aaKnown RBP19.83■□□□□ 0.77
SF3A1-209ENST00000496189 ANKRD45Q5TZF3 282 aa19.83■□□□□ 0.77
SF3A1-209ENST00000496189 MIGA2Q7L4E1 593 aa19.83■□□□□ 0.77
SF3A1-209ENST00000496189 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.83■□□□□ 0.77
SF3A1-209ENST00000496189 SH3RF3Q8TEJ3 882 aaPredicted RBP19.83■□□□□ 0.77
SF3A1-209ENST00000496189 CLMNQ96JQ2 1002 aa19.83■□□□□ 0.77
SF3A1-209ENST00000496189 ELP3Q9H9T3 547 aa19.83■□□□□ 0.77
SF3A1-209ENST00000496189 RFX7Q2KHR2 1363 aa19.83■□□□□ 0.76
SF3A1-209ENST00000496189 TTC41PQ6P2S7 1318 aa19.82■□□□□ 0.76
SF3A1-209ENST00000496189 DOCK2Q92608 1830 aa19.82■□□□□ 0.76
SF3A1-209ENST00000496189 MANSC4A6NHS7 340 aaPredicted RBP19.82■□□□□ 0.76
SF3A1-209ENST00000496189 INHBEP58166 350 aa19.82■□□□□ 0.76
SF3A1-209ENST00000496189 LRRFIP1Q32MZ4 808 aaKnown RBP19.82■□□□□ 0.76
SF3A1-209ENST00000496189 WNK4Q96J92 1243 aa19.82■□□□□ 0.76
SF3A1-209ENST00000496189 TRIM34Q9BYJ4 488 aa19.82■□□□□ 0.76
SF3A1-209ENST00000496189 OSBPL5Q9H0X9 879 aaPredicted RBP19.82■□□□□ 0.76
SF3A1-209ENST00000496189 DHX36Q9H2U1 1008 aaKnown RBP19.82■□□□□ 0.76
SF3A1-209ENST00000496189 DDX4Q9NQI0 724 aaKnown RBP19.82■□□□□ 0.76
SF3A1-209ENST00000496189 USP5P45974 858 aa19.81■□□□□ 0.76
SF3A1-209ENST00000496189 VGLL4Q14135 290 aa19.81■□□□□ 0.76
SF3A1-209ENST00000496189 MIGA1Q8NAN2 632 aa19.81■□□□□ 0.76
SF3A1-209ENST00000496189 OPTNQ96CV9 577 aa19.81■□□□□ 0.76
SF3A1-209ENST00000496189 ZIC5Q96T25 663 aa19.81■□□□□ 0.76
SF3A1-209ENST00000496189 SAGE1Q9NXZ1 904 aa19.81■□□□□ 0.76
SF3A1-209ENST00000496189 PCNTO95613 3336 aa19.81■□□□□ 0.76
SF3A1-209ENST00000496189 COL2A1P02458 1487 aaPredicted RBP19.8■□□□□ 0.76
SF3A1-209ENST00000496189 MYO5AQ9Y4I1 1855 aaKnown RBP19.8■□□□□ 0.76
SF3A1-209ENST00000496189 MAGEB6P1A0A0J9YX57 407 aa19.8■□□□□ 0.76
SF3A1-209ENST00000496189 PDE6AP16499 860 aa19.8■□□□□ 0.76
SF3A1-209ENST00000496189 OTUD7BQ6GQQ9 843 aa19.8■□□□□ 0.76
SF3A1-209ENST00000496189 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.8■□□□□ 0.76
SF3A1-209ENST00000496189 ADGRA1Q86SQ6 560 aa19.8■□□□□ 0.76
SF3A1-209ENST00000496189 ZFPM1Q8IX07 1006 aa19.8■□□□□ 0.76
SF3A1-209ENST00000496189 TGFBRAP1Q8WUH2 860 aa19.8■□□□□ 0.76
SF3A1-209ENST00000496189 ALDH1A1P00352 501 aa19.79■□□□□ 0.76
SF3A1-209ENST00000496189 HLA-DOAP06340 250 aa19.79■□□□□ 0.76
SF3A1-209ENST00000496189 ERO1BQ86YB8 467 aa19.79■□□□□ 0.76
SF3A1-209ENST00000496189 SMC5Q8IY18 1101 aa19.79■□□□□ 0.76
SF3A1-209ENST00000496189 CRNKL1Q9BZJ0 848 aaKnown RBP19.79■□□□□ 0.76
SF3A1-209ENST00000496189 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.79■□□□□ 0.76
SF3A1-209ENST00000496189 ATRNL1Q5VV63 1379 aa19.79■□□□□ 0.76
SF3A1-209ENST00000496189 OTOFQ9HC10 1997 aa19.79■□□□□ 0.76
SF3A1-209ENST00000496189 ZNF532Q9HCE3 1301 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 DDTLA6NHG4 134 aaPredicted RBP19.78■□□□□ 0.76
SF3A1-209ENST00000496189 TRPA1O75762 1119 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 GLRX3O76003 335 aaKnown RBP19.78■□□□□ 0.76
SF3A1-209ENST00000496189 IGHDP01880 384 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 MX1P20591 662 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 LBX1P52954 281 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 DYNLL1P63167 89 aaKnown RBP19.78■□□□□ 0.76
SF3A1-209ENST00000496189 MAPKAPK5Q8IW41 473 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 ZKSCAN4Q969J2 545 aaPredicted RBP19.78■□□□□ 0.76
SF3A1-209ENST00000496189 OTUD5Q96G74 571 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 PRDM10Q9NQV6 1147 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 PICK1Q9NRD5 415 aa19.78■□□□□ 0.76
SF3A1-209ENST00000496189 FLT1P17948 1338 aa19.77■□□□□ 0.76
SF3A1-209ENST00000496189 HSPA8P11142 646 aaKnown RBP19.77■□□□□ 0.76
SF3A1-209ENST00000496189 TM4SF4P48230 202 aa19.77■□□□□ 0.76
SF3A1-209ENST00000496189 GTF2A2P52657 109 aa19.77■□□□□ 0.76
SF3A1-209ENST00000496189 CRACR2BQ8N4Y2 399 aaPredicted RBP19.77■□□□□ 0.76
SF3A1-209ENST00000496189 EDC3Q96F86 508 aaKnown RBP19.77■□□□□ 0.76
SF3A1-209ENST00000496189 RNF186Q9NXI6 227 aa19.77■□□□□ 0.76
SF3A1-209ENST00000496189 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
SF3A1-209ENST00000496189 HERC5Q9UII4 1024 aaKnown RBP19.77■□□□□ 0.76
SF3A1-209ENST00000496189 SPDYE5A6NIY4 337 aa19.76■□□□□ 0.75
SF3A1-209ENST00000496189 TBC1D12O60347 775 aa19.76■□□□□ 0.75
SF3A1-209ENST00000496189 PPATQ06203 517 aa19.76■□□□□ 0.75
SF3A1-209ENST00000496189 UBE3CQ15386 1083 aa19.76■□□□□ 0.75
SF3A1-209ENST00000496189 SH3BP5LQ7L8J4 393 aa19.76■□□□□ 0.75
SF3A1-209ENST00000496189 DDRGK1Q96HY6 314 aa19.76■□□□□ 0.75
SF3A1-209ENST00000496189 ZNF112Q9UJU3 913 aa19.76■□□□□ 0.75
SF3A1-209ENST00000496189 SNCAIPQ9Y6H5 919 aa19.76■□□□□ 0.75
SF3A1-209ENST00000496189 INPP5BP32019 993 aa19.75■□□□□ 0.75
SF3A1-209ENST00000496189 ADD2P35612 726 aa19.75■□□□□ 0.75
SF3A1-209ENST00000496189 NOL9Q5SY16 702 aaKnown RBP19.75■□□□□ 0.75
SF3A1-209ENST00000496189 TSHZ3Q63HK5 1081 aa19.75■□□□□ 0.75
SF3A1-209ENST00000496189 B4GALNT3Q6L9W6 998 aa19.75■□□□□ 0.75
SF3A1-209ENST00000496189 TSKSQ9UJT2 592 aa19.75■□□□□ 0.75
SF3A1-209ENST00000496189 CTNND1O60716 968 aaKnown RBP19.74■□□□□ 0.75
SF3A1-209ENST00000496189 ZFYP08048 801 aaPredicted RBP19.74■□□□□ 0.75
SF3A1-209ENST00000496189 PPIL2Q13356 520 aa19.74■□□□□ 0.75
SF3A1-209ENST00000496189 SNAPC2Q13487 334 aa19.74■□□□□ 0.75
SF3A1-209ENST00000496189 TTC6Q86TZ1 520 aa19.74■□□□□ 0.75
SF3A1-209ENST00000496189 FOXP4Q8IVH2 680 aaPredicted RBP19.74■□□□□ 0.75
SF3A1-209ENST00000496189 AMOTL1Q8IY63 956 aa19.74■□□□□ 0.75
SF3A1-209ENST00000496189 SCYL3Q8IZE3 742 aa19.74■□□□□ 0.75
SF3A1-209ENST00000496189 KBTBD3Q8NAB2 608 aa19.74■□□□□ 0.75
SF3A1-209ENST00000496189 CETPP11597 493 aa19.73■□□□□ 0.75
SF3A1-209ENST00000496189 MAP3K10Q02779 954 aa19.73■□□□□ 0.75
SF3A1-209ENST00000496189 NUCB1Q02818 461 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms