RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 RCAN1P53805 252 aa12.84□□□□□ -0.35
CMSS1-208ENST00000496116 SLC39A14Q15043 492 aa12.84□□□□□ -0.35
CMSS1-208ENST00000496116 IQCB1Q15051 598 aa12.84□□□□□ -0.35
CMSS1-208ENST00000496116 RRP12Q5JTH9 1297 aaKnown RBP12.84□□□□□ -0.35
CMSS1-208ENST00000496116 NYXQ9GZU5 481 aa12.84□□□□□ -0.35
CMSS1-208ENST00000496116 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
CMSS1-208ENST00000496116 A0A1B0GUL6 1792 aa12.83□□□□□ -0.35
CMSS1-208ENST00000496116 MAGEB6P1A0A0J9YX57 407 aa12.83□□□□□ -0.35
CMSS1-208ENST00000496116 PPARAQ07869 468 aa12.83□□□□□ -0.35
CMSS1-208ENST00000496116 SARM1Q6SZW1 724 aa12.83□□□□□ -0.35
CMSS1-208ENST00000496116 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.35
CMSS1-208ENST00000496116 TRIM22Q8IYM9 498 aa12.83□□□□□ -0.35
CMSS1-208ENST00000496116 SCN7AQ01118 1682 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 PPP6R2O75170 966 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
CMSS1-208ENST00000496116 IFNAR1P17181 557 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 CMA1P23946 247 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 U2AF2P26368 475 aaKnown RBP eCLIP12.83□□□□□ -0.36
CMSS1-208ENST00000496116 CDC25BP30305 580 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 GYG1P46976 350 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 PIP4K2BP78356 416 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 AIFM3Q96NN9 605 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 SLC26A6Q9BXS9 759 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 FAM217BQ9NTX9 383 aaPredicted RBP12.83□□□□□ -0.36
CMSS1-208ENST00000496116 SPTLC3Q9NUV7 552 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 MINPP1Q9UNW1 487 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 IQSEC3Q9UPP2 1182 aaPredicted RBP12.83□□□□□ -0.36
CMSS1-208ENST00000496116 ECM29Q5VYK3 1845 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 CASZ1Q86V15 1759 aa12.83□□□□□ -0.36
CMSS1-208ENST00000496116 RANBP6O60518 1105 aaKnown RBP12.82□□□□□ -0.36
CMSS1-208ENST00000496116 SAFBQ15424 915 aaKnown RBP eCLIP12.82□□□□□ -0.36
CMSS1-208ENST00000496116 VPS72Q15906 364 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 RTN1Q16799 776 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 BICDL1Q6ZP65 573 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 KIAA1524Q8TCG1 905 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 ESR2Q92731 530 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 UBAC1Q9BSL1 405 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 KCNF1Q9H3M0 494 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 KIAA1468Q9P260 1216 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 SEMA3EO15041 775 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 ZNF202O95125 648 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
CMSS1-208ENST00000496116 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 NARFQ9UHQ1 456 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 ANAPC4Q9UJX5 808 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 TACC3Q9Y6A5 838 aa12.82□□□□□ -0.36
CMSS1-208ENST00000496116 PTGS1P23219 599 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 PPP2R5BQ15173 497 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 AXDND1Q5T1B0 1012 aaPredicted RBP12.81□□□□□ -0.36
CMSS1-208ENST00000496116 TBC1D9BQ66K14 1250 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 CCDC186Q7Z3E2 898 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 MRFAP1L1Q96HT8 127 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 TIGD1Q96MW7 591 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 SETDB2Q96T68 719 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 COL4A1P02462 1669 aa12.81□□□□□ -0.36
CMSS1-208ENST00000496116 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 MINDY4BA8MYZ0 360 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 ZPR1O75312 459 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 DEXIO95424 95 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 UQCRHP07919 91 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 SLC3A2P08195 630 aaKnown RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 PFKFB1P16118 471 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 MARCKSP29966 332 aaPredicted RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 ADGRA1Q86SQ6 560 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 ZKSCAN3Q9BRR0 538 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 RPS6KA4O75676 772 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 PCP11498 1178 aaKnown RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 RBM6P78332 1123 aaKnown RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 DHX40Q8IX18 779 aaKnown RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 CELF1Q92879 486 aaKnown RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 FAM84BQ96KN1 310 aaPredicted RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 C8orf37Q96NL8 207 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 RIOK1Q9BRS2 568 aaKnown RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 ANKRD2Q9GZV1 360 aa12.8□□□□□ -0.36
CMSS1-208ENST00000496116 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.8□□□□□ -0.36
CMSS1-208ENST00000496116 TAF1P21675 1872 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 CACNA1SQ13698 1873 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 WDHD1O75717 1129 aaPredicted RBP12.79□□□□□ -0.36
CMSS1-208ENST00000496116 MMP1P03956 469 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 SYKP43405 635 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
CMSS1-208ENST00000496116 NOSTRINQ8IVI9 506 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 STK11IPQ8N1F8 1099 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 FANCBQ8NB91 859 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 COL1A1P02452 1464 aaPredicted RBP12.79□□□□□ -0.36
CMSS1-208ENST00000496116 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms