RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 ZFPM1Q8IX07 1006 aa20.81■□□□□ 0.92
COMMD3-214ENST00000496071 CFHR5Q9BXR6 569 aa20.81■□□□□ 0.92
COMMD3-214ENST00000496071 ZNF112Q9UJU3 913 aa20.81■□□□□ 0.92
COMMD3-214ENST00000496071 RFX7Q2KHR2 1363 aa20.81■□□□□ 0.92
COMMD3-214ENST00000496071 MYO5AQ9Y4I1 1855 aaKnown RBP20.8■□□□□ 0.92
COMMD3-214ENST00000496071 SPDYE5A6NIY4 337 aa20.8■□□□□ 0.92
COMMD3-214ENST00000496071 PLCG2P16885 1265 aa20.8■□□□□ 0.92
COMMD3-214ENST00000496071 RRP1P56182 461 aaKnown RBP20.8■□□□□ 0.92
COMMD3-214ENST00000496071 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
COMMD3-214ENST00000496071 TMED8Q6PL24 325 aaPredicted RBP20.8■□□□□ 0.92
COMMD3-214ENST00000496071 IFNL1Q8IU54 200 aa20.8■□□□□ 0.92
COMMD3-214ENST00000496071 DOCK2Q92608 1830 aa20.8■□□□□ 0.92
COMMD3-214ENST00000496071 TESPA1A2RU30 521 aaPredicted RBP20.79■□□□□ 0.92
COMMD3-214ENST00000496071 TBC1D8O95759 1140 aa20.79■□□□□ 0.92
COMMD3-214ENST00000496071 GTF2A2P52657 109 aa20.79■□□□□ 0.92
COMMD3-214ENST00000496071 PPP4CP60510 307 aa20.79■□□□□ 0.92
COMMD3-214ENST00000496071 CACNB1Q02641 598 aaPredicted RBP20.79■□□□□ 0.92
COMMD3-214ENST00000496071 PICALMQ13492 652 aa20.79■□□□□ 0.92
COMMD3-214ENST00000496071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.79■□□□□ 0.92
COMMD3-214ENST00000496071 ZKSCAN4Q969J2 545 aaPredicted RBP20.79■□□□□ 0.92
COMMD3-214ENST00000496071 DDX4Q9NQI0 724 aaKnown RBP20.79■□□□□ 0.92
COMMD3-214ENST00000496071 PIH1D3Q9NQM4 214 aaKnown RBP20.79■□□□□ 0.92
COMMD3-214ENST00000496071 SNCAIPQ9Y6H5 919 aa20.79■□□□□ 0.92
COMMD3-214ENST00000496071 TTF1Q15361 905 aaPredicted RBP20.78■□□□□ 0.92
COMMD3-214ENST00000496071 TEX11Q8IYF3 940 aa20.78■□□□□ 0.92
COMMD3-214ENST00000496071 OTUD5Q96G74 571 aa20.78■□□□□ 0.92
COMMD3-214ENST00000496071 LRRCC1Q9C099 1032 aa20.78■□□□□ 0.92
COMMD3-214ENST00000496071 ATRNL1Q5VV63 1379 aa20.77■□□□□ 0.92
COMMD3-214ENST00000496071 DDTLA6NHG4 134 aaPredicted RBP20.77■□□□□ 0.92
COMMD3-214ENST00000496071 IDH1O75874 414 aaKnown RBP20.77■□□□□ 0.92
COMMD3-214ENST00000496071 INPP5BP32019 993 aa20.77■□□□□ 0.92
COMMD3-214ENST00000496071 MAP3K10Q02779 954 aa20.77■□□□□ 0.92
COMMD3-214ENST00000496071 PPATQ06203 517 aa20.77■□□□□ 0.92
COMMD3-214ENST00000496071 MAP3K12Q12852 859 aa20.77■□□□□ 0.92
COMMD3-214ENST00000496071 MS4A4AQ96JQ5 239 aa20.77■□□□□ 0.92
COMMD3-214ENST00000496071 AATFQ9NY61 560 aaKnown RBP eCLIP20.77■□□□□ 0.92
COMMD3-214ENST00000496071 COL2A1P02458 1487 aaPredicted RBP20.76■□□□□ 0.91
COMMD3-214ENST00000496071 IGF2BP3O00425 579 aaKnown RBP eCLIP20.76■□□□□ 0.91
COMMD3-214ENST00000496071 PPIL2Q13356 520 aa20.76■□□□□ 0.91
COMMD3-214ENST00000496071 NOL9Q5SY16 702 aaKnown RBP20.76■□□□□ 0.91
COMMD3-214ENST00000496071 SH3BP5LQ7L8J4 393 aa20.76■□□□□ 0.91
COMMD3-214ENST00000496071 CERS3Q8IU89 383 aa20.76■□□□□ 0.91
COMMD3-214ENST00000496071 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
COMMD3-214ENST00000496071 GPR25O00155 361 aa20.75■□□□□ 0.91
COMMD3-214ENST00000496071 TBC1D12O60347 775 aa20.75■□□□□ 0.91
COMMD3-214ENST00000496071 CYP7A1P22680 504 aa20.75■□□□□ 0.91
COMMD3-214ENST00000496071 SH3RF3Q8TEJ3 882 aaPredicted RBP20.75■□□□□ 0.91
COMMD3-214ENST00000496071 OSBPL5Q9H0X9 879 aaPredicted RBP20.75■□□□□ 0.91
COMMD3-214ENST00000496071 DCTPP1Q9H773 170 aa20.75■□□□□ 0.91
COMMD3-214ENST00000496071 CCL15-CCL14A0A0B4J2E2 113 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 CETPP11597 493 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 SNAPC2Q13487 334 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 DGKZQ13574 1117 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 CCL15Q16663 113 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 ADGRA1Q86SQ6 560 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 ANTXR1Q9H6X2 564 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 NDUFB9Q9Y6M9 179 aa20.74■□□□□ 0.91
COMMD3-214ENST00000496071 PHF20L1A8MW92 1017 aa20.73■□□□□ 0.91
COMMD3-214ENST00000496071 IRF6O14896 467 aa20.73■□□□□ 0.91
COMMD3-214ENST00000496071 ATP5JP18859 108 aa20.73■□□□□ 0.91
COMMD3-214ENST00000496071 MAGEB6Q8N7X4 407 aa20.73■□□□□ 0.91
COMMD3-214ENST00000496071 ZNF296Q8WUU4 475 aaPredicted RBP20.73■□□□□ 0.91
COMMD3-214ENST00000496071 BRI3BPQ8WY22 251 aa20.73■□□□□ 0.91
COMMD3-214ENST00000496071 PTPN18Q99952 460 aa20.73■□□□□ 0.91
COMMD3-214ENST00000496071 DHX36Q9H2U1 1008 aaKnown RBP20.73■□□□□ 0.91
COMMD3-214ENST00000496071 CTNND1O60716 968 aaKnown RBP20.72■□□□□ 0.91
COMMD3-214ENST00000496071 SCYL3Q8IZE3 742 aa20.72■□□□□ 0.91
COMMD3-214ENST00000496071 ABHD8Q96I13 439 aa20.72■□□□□ 0.91
COMMD3-214ENST00000496071 MCOLN1Q9GZU1 580 aa20.72■□□□□ 0.91
COMMD3-214ENST00000496071 FOCADQ5VW36 1801 aa20.71■□□□□ 0.91
COMMD3-214ENST00000496071 CDK5RAP2Q96SN8 1893 aa20.71■□□□□ 0.91
COMMD3-214ENST00000496071 FKTNO75072 461 aa20.71■□□□□ 0.91
COMMD3-214ENST00000496071 CAPN15O75808 1086 aa20.71■□□□□ 0.91
COMMD3-214ENST00000496071 CTU1Q7Z7A3 348 aaKnown RBP20.71■□□□□ 0.91
COMMD3-214ENST00000496071 TGFBRAP1Q8WUH2 860 aa20.71■□□□□ 0.91
COMMD3-214ENST00000496071 DNAJC2Q99543 621 aaKnown RBP20.71■□□□□ 0.91
COMMD3-214ENST00000496071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.71■□□□□ 0.91
COMMD3-214ENST00000496071 ZCCHC17Q9NP64 241 aaKnown RBP20.71■□□□□ 0.91
COMMD3-214ENST00000496071 PICK1Q9NRD5 415 aa20.71■□□□□ 0.91
COMMD3-214ENST00000496071 PI4KBQ9UBF8 816 aa20.71■□□□□ 0.91
COMMD3-214ENST00000496071 R3HDMLQ9H3Y0 253 aa20.7■□□□□ 0.9
COMMD3-214ENST00000496071 HERC5Q9UII4 1024 aaKnown RBP20.7■□□□□ 0.9
COMMD3-214ENST00000496071 KCNH4Q9UQ05 1017 aa20.7■□□□□ 0.9
COMMD3-214ENST00000496071 PCDHB15Q9Y5E8 787 aa20.7■□□□□ 0.9
COMMD3-214ENST00000496071 GOLIM4O00461 696 aa20.69■□□□□ 0.9
COMMD3-214ENST00000496071 DYNLL1P63167 89 aaKnown RBP20.69■□□□□ 0.9
COMMD3-214ENST00000496071 CRHR2Q13324 411 aa20.69■□□□□ 0.9
COMMD3-214ENST00000496071 SLC9C2Q5TAH2 1124 aa20.69■□□□□ 0.9
COMMD3-214ENST00000496071 MAPKAPK5Q8IW41 473 aa20.69■□□□□ 0.9
COMMD3-214ENST00000496071 BOLA2Q9H3K6 86 aa20.69■□□□□ 0.9
COMMD3-214ENST00000496071 ZFYVE28Q9HCC9 887 aa20.69■□□□□ 0.9
COMMD3-214ENST00000496071 PAG1Q9NWQ8 432 aa20.69■□□□□ 0.9
COMMD3-214ENST00000496071 FLT1P17948 1338 aa20.69■□□□□ 0.9
COMMD3-214ENST00000496071 CXCL11O14625 94 aa20.68■□□□□ 0.9
COMMD3-214ENST00000496071 SMARCA5O60264 1052 aaPredicted RBP20.68■□□□□ 0.9
COMMD3-214ENST00000496071 AAMPQ13685 434 aa20.68■□□□□ 0.9
COMMD3-214ENST00000496071 TAF1CQ15572 869 aaPredicted RBP20.68■□□□□ 0.9
COMMD3-214ENST00000496071 PKN2Q16513 984 aaKnown RBP20.68■□□□□ 0.9
COMMD3-214ENST00000496071 FOXP4Q8IVH2 680 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms