RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 FLT1P17948 1338 aa17.72■□□□□ 0.43
HDAC9-226ENST00000496026 ECM29Q5VYK3 1845 aa17.71■□□□□ 0.43
HDAC9-226ENST00000496026 A0A0D9SFI3 127 aa17.71■□□□□ 0.43
HDAC9-226ENST00000496026 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
HDAC9-226ENST00000496026 CELF2O95319 508 aaKnown RBP17.71■□□□□ 0.43
HDAC9-226ENST00000496026 MCMDC2Q4G0Z9 681 aa17.71■□□□□ 0.43
HDAC9-226ENST00000496026 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
HDAC9-226ENST00000496026 SDR42E1Q8WUS8 393 aa17.71■□□□□ 0.43
HDAC9-226ENST00000496026 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.43
HDAC9-226ENST00000496026 STRBPQ96SI9 672 aaKnown RBP17.71■□□□□ 0.43
HDAC9-226ENST00000496026 PASKQ96RG2 1323 aa17.71■□□□□ 0.42
HDAC9-226ENST00000496026 PRKAB2O43741 272 aa17.7■□□□□ 0.42
HDAC9-226ENST00000496026 GNAT2P19087 354 aa17.7■□□□□ 0.42
HDAC9-226ENST00000496026 NBPF12Q5TAG4 269 aaPredicted RBP17.7■□□□□ 0.42
HDAC9-226ENST00000496026 HOOK2Q96ED9 719 aa17.7■□□□□ 0.42
HDAC9-226ENST00000496026 TEPSINQ96N21 525 aa17.7■□□□□ 0.42
HDAC9-226ENST00000496026 SAP30BPQ9UHR5 308 aaKnown RBP17.7■□□□□ 0.42
HDAC9-226ENST00000496026 RPAP1Q9BWH6 1393 aaPredicted RBP17.69■□□□□ 0.42
HDAC9-226ENST00000496026 MYH7P12883 1935 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 APPP05067 770 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 CHMLP26374 656 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 MFAP1P55081 439 aaKnown RBP17.69■□□□□ 0.42
HDAC9-226ENST00000496026 C1QTNF8P60827 252 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 CCDC129Q6ZRS4 1044 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 CDAN1Q8IWY9 1227 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 CSRNP1Q96S65 589 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 ATP8A2Q9NTI2 1148 aa17.69■□□□□ 0.42
HDAC9-226ENST00000496026 TTLL12Q14166 644 aaPredicted RBP17.68■□□□□ 0.42
HDAC9-226ENST00000496026 DHX36Q9H2U1 1008 aaKnown RBP17.68■□□□□ 0.42
HDAC9-226ENST00000496026 DCP1AQ9NPI6 582 aaPredicted RBP17.68■□□□□ 0.42
HDAC9-226ENST00000496026 DDTLA6NHG4 134 aaPredicted RBP17.67■□□□□ 0.42
HDAC9-226ENST00000496026 PATL2C9JE40 543 aaKnown RBP17.67■□□□□ 0.42
HDAC9-226ENST00000496026 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
HDAC9-226ENST00000496026 PRKG1Q13976 671 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 SLC4A8Q2Y0W8 1093 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 CST9Q5W186 159 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 CASC1Q6TDU7 716 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 SH3BP5LQ7L8J4 393 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 C2orf69Q8N8R5 385 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 GBA2Q9HCG7 927 aaPredicted RBP17.67■□□□□ 0.42
HDAC9-226ENST00000496026 MCM9Q9NXL9 1143 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 PALD1Q9ULE6 856 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 CCDC171Q6TFL3 1326 aa17.67■□□□□ 0.42
HDAC9-226ENST00000496026 TMEM88BA6NKF7 163 aa17.66■□□□□ 0.42
HDAC9-226ENST00000496026 GSG1L2A8MUP6 293 aa17.66■□□□□ 0.42
HDAC9-226ENST00000496026 PPP1R12BO60237 982 aaPredicted RBP17.66■□□□□ 0.42
HDAC9-226ENST00000496026 HLA-DOAP06340 250 aa17.66■□□□□ 0.42
HDAC9-226ENST00000496026 APLP1P51693 650 aa17.66■□□□□ 0.42
HDAC9-226ENST00000496026 DCAF15Q66K64 600 aa17.66■□□□□ 0.42
HDAC9-226ENST00000496026 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
HDAC9-226ENST00000496026 AMOTL1Q8IY63 956 aa17.66■□□□□ 0.42
HDAC9-226ENST00000496026 NACAP1Q9BZK3 213 aa17.66■□□□□ 0.42
HDAC9-226ENST00000496026 ATRNL1Q5VV63 1379 aa17.66■□□□□ 0.42
HDAC9-226ENST00000496026 COL2A1P02458 1487 aaPredicted RBP17.65■□□□□ 0.42
HDAC9-226ENST00000496026 CDC45O75419 566 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 TDO2P48775 406 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 GIMAP6Q6P9H5 292 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 MIGA2Q7L4E1 593 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 ARMC9Q7Z3E5 817 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 CRACR2BQ8N4Y2 399 aaPredicted RBP17.65■□□□□ 0.42
HDAC9-226ENST00000496026 TRIM34Q9BYJ4 488 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 PI4KBQ9UBF8 816 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 MKRN1Q9UHC7 482 aaKnown RBP17.65■□□□□ 0.42
HDAC9-226ENST00000496026 RAD50Q92878 1312 aa17.65■□□□□ 0.42
HDAC9-226ENST00000496026 POLR2AP24928 1970 aaKnown RBP17.64■□□□□ 0.41
HDAC9-226ENST00000496026 FKBP1BP68106 108 aa17.64■□□□□ 0.41
HDAC9-226ENST00000496026 ANGEL1Q9UNK9 670 aaKnown RBP17.64■□□□□ 0.41
HDAC9-226ENST00000496026 FZD1Q9UP38 647 aa17.64■□□□□ 0.41
HDAC9-226ENST00000496026 AK9Q5TCS8 1911 aa17.64■□□□□ 0.41
HDAC9-226ENST00000496026 SSC5DA1L4H1 1573 aa17.63■□□□□ 0.41
HDAC9-226ENST00000496026 USP17L12C9JPN9 530 aa17.63■□□□□ 0.41
HDAC9-226ENST00000496026 USP17L21D6R901 530 aa17.63■□□□□ 0.41
HDAC9-226ENST00000496026 IREB2P48200 963 aaKnown RBP17.63■□□□□ 0.41
HDAC9-226ENST00000496026 VPS53Q5VIR6 699 aa17.63■□□□□ 0.41
HDAC9-226ENST00000496026 MOB2Q70IA6 237 aa17.63■□□□□ 0.41
HDAC9-226ENST00000496026 IFNL3Q8IZI9 196 aa17.63■□□□□ 0.41
HDAC9-226ENST00000496026 ZNF341Q9BYN7 854 aa17.63■□□□□ 0.41
HDAC9-226ENST00000496026 NAPBQ9H115 298 aa17.63■□□□□ 0.41
HDAC9-226ENST00000496026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.63■□□□□ 0.41
HDAC9-226ENST00000496026 EPB41L4AQ9HCS5 686 aaPredicted RBP17.63■□□□□ 0.41
HDAC9-226ENST00000496026 ARPP21Q9UBL0 812 aaPredicted RBP17.63■□□□□ 0.41
HDAC9-226ENST00000496026 ABT1Q9ULW3 272 aaKnown RBP17.63■□□□□ 0.41
HDAC9-226ENST00000496026 SGSM2O43147 1006 aa17.62■□□□□ 0.41
HDAC9-226ENST00000496026 USP2O75604 605 aaPredicted RBP17.62■□□□□ 0.41
HDAC9-226ENST00000496026 HSPD1P10809 573 aaKnown RBP17.62■□□□□ 0.41
HDAC9-226ENST00000496026 CTR9Q6PD62 1173 aa17.62■□□□□ 0.41
HDAC9-226ENST00000496026 FOXP4Q8IVH2 680 aaPredicted RBP17.62■□□□□ 0.41
HDAC9-226ENST00000496026 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
HDAC9-226ENST00000496026 HERC5Q9UII4 1024 aaKnown RBP17.62■□□□□ 0.41
HDAC9-226ENST00000496026 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
HDAC9-226ENST00000496026 MINDY4BA8MYZ0 360 aa17.61■□□□□ 0.41
HDAC9-226ENST00000496026 UBE2Q2LH0YL09 131 aa17.61■□□□□ 0.41
HDAC9-226ENST00000496026 CYP2D6P10635 497 aa17.61■□□□□ 0.41
HDAC9-226ENST00000496026 HSPA6P17066 643 aa17.61■□□□□ 0.41
HDAC9-226ENST00000496026 PLCD1P51178 756 aa17.61■□□□□ 0.41
HDAC9-226ENST00000496026 C12orf60Q5U649 245 aa17.61■□□□□ 0.41
HDAC9-226ENST00000496026 KIAA1211Q6ZU35 1233 aa17.61■□□□□ 0.41
HDAC9-226ENST00000496026 WRNIP1Q96S55 665 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms