RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 INSRP06213 1382 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 FLT4P35916 1363 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 KDRP35968 1356 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 KIF24Q5T7B8 1368 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 KDM6AO15550 1401 aaPredicted RBP5.88□□□□□ -1.47
VPS52-222ENST00000495981 NFKBIEO00221 500 aa5.87□□□□□ -1.47
VPS52-222ENST00000495981 GYS1P13807 737 aa5.87□□□□□ -1.47
VPS52-222ENST00000495981 CDK11BP21127 795 aaKnown RBP5.87□□□□□ -1.47
VPS52-222ENST00000495981 CANXP27824 592 aaKnown RBP5.87□□□□□ -1.47
VPS52-222ENST00000495981 CENPCQ03188 943 aa5.87□□□□□ -1.47
VPS52-222ENST00000495981 DDR1Q08345 913 aa5.87□□□□□ -1.47
VPS52-222ENST00000495981 NEUROD1Q13562 356 aa5.87□□□□□ -1.47
VPS52-222ENST00000495981 ZNF394Q53GI3 561 aa5.87□□□□□ -1.47
VPS52-222ENST00000495981 MPRIPQ6WCQ1 1025 aa5.87□□□□□ -1.47
VPS52-222ENST00000495981 PIGBQ92521 554 aa5.87□□□□□ -1.47
VPS52-222ENST00000495981 SRA1Q9HD15 236 aaKnown RBP5.87□□□□□ -1.47
VPS52-222ENST00000495981 CUEDC1Q9NWM3 386 aaPredicted RBP5.87□□□□□ -1.47
VPS52-222ENST00000495981 MRC1P22897 1456 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 TMF1P82094 1093 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 PTPN12Q05209 780 aaKnown RBP5.86□□□□□ -1.47
VPS52-222ENST00000495981 CBLBQ13191 982 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 PI16Q6UXB8 463 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 TREML1Q86YW5 311 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 NBPF15Q8N660 670 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 USHBP1Q8N6Y0 703 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 GPR152Q8TDT2 470 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 TERF2IPQ9NYB0 399 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 PCDHGB7Q9Y5F8 929 aa5.86□□□□□ -1.47
VPS52-222ENST00000495981 VIRMAQ69YN4 1812 aaKnown RBP5.85□□□□□ -1.47
VPS52-222ENST00000495981 N4BP2Q86UW6 1770 aaPredicted RBP5.85□□□□□ -1.47
VPS52-222ENST00000495981 DLEC1Q9Y238 1755 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 CGNL1Q0VF96 1302 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 PCDH11XQ9BZA7 1347 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 PCDH11YQ9BZA8 1340 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 WDR33Q9C0J8 1336 aaKnown RBP5.85□□□□□ -1.47
VPS52-222ENST00000495981 ST20-MTHFSA0A0A6YYL1 179 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 LOC102724428A0A0B4J2F2 783 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 RASSF10A6NK89 507 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 CYP27B1O15528 508 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 DDNO94850 711 aaPredicted RBP5.85□□□□□ -1.47
VPS52-222ENST00000495981 LMNB1P20700 586 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 TXLNAP40222 546 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 SIK1P57059 783 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 RRS1Q15050 365 aaKnown RBP5.85□□□□□ -1.47
VPS52-222ENST00000495981 C1orf53Q5VUE5 145 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 USPL1Q5W0Q7 1092 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 Q6ZVU0 165 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 ARMC5Q96C12 935 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 MRGPRX2Q96LB1 330 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 KLF16Q9BXK1 252 aaPredicted RBP5.85□□□□□ -1.47
VPS52-222ENST00000495981 OSBPL7Q9BZF2 842 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 PGPEP1Q9NXJ5 209 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 SRP68Q9UHB9 627 aaKnown RBP5.85□□□□□ -1.47
VPS52-222ENST00000495981 DMGDHQ9UI17 866 aaKnown RBP5.85□□□□□ -1.47
VPS52-222ENST00000495981 ASAP1Q9ULH1 1129 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 ZNF232Q9UNY5 417 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 CHMP3Q9Y3E7 222 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 ARFGEF1Q9Y6D6 1849 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 UBR2Q8IWV8 1755 aa5.85□□□□□ -1.47
VPS52-222ENST00000495981 BRCA2P51587 3418 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 WNT7AO00755 349 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 IRS1P35568 1242 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 PTGIRP43119 386 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 RBL2Q08999 1139 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 DEFB115Q30KQ5 88 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS52-222ENST00000495981 NBPF6Q5VWK0 638 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 PPP1R18Q6NYC8 613 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 ZNF662Q6ZS27 426 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 COG3Q96JB2 828 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 NBPF4Q96M43 638 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 AGBL1Q96MI9 1066 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 FRMD6Q96NE9 622 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 DNAJC25Q9H1X3 360 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 PIF1Q9H611 641 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 SCN11AQ9UI33 1791 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 COL6A3P12111 3177 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 SCN7AQ01118 1682 aa5.84□□□□□ -1.47
VPS52-222ENST00000495981 RANBP2P49792 3224 aaKnown RBP5.84□□□□□ -1.48
VPS52-222ENST00000495981 TIAM2Q8IVF5 1701 aa5.83□□□□□ -1.48
VPS52-222ENST00000495981 NRXN2Q9P2S2 1712 aa5.83□□□□□ -1.48
VPS52-222ENST00000495981 FYB1O15117 783 aa5.83□□□□□ -1.48
VPS52-222ENST00000495981 AOC2O75106 756 aa5.83□□□□□ -1.48
VPS52-222ENST00000495981 CD2BP2O95400 341 aaKnown RBP5.83□□□□□ -1.48
VPS52-222ENST00000495981 ATP2B1P20020 1258 aa5.83□□□□□ -1.48
VPS52-222ENST00000495981 DNAJA1P31689 397 aaKnown RBP5.83□□□□□ -1.48
VPS52-222ENST00000495981 GTF2F1P35269 517 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS52-222ENST00000495981 MAP2K1Q02750 393 aaPredicted RBP5.83□□□□□ -1.48
VPS52-222ENST00000495981 CCDC144BQ3MJ40 725 aa5.83□□□□□ -1.48
VPS52-222ENST00000495981 HABP4Q5JVS0 413 aaKnown RBP5.83□□□□□ -1.48
VPS52-222ENST00000495981 CYP4F22Q6NT55 531 aa5.83□□□□□ -1.48
VPS52-222ENST00000495981 NOP9Q86U38 636 aaKnown RBP5.83□□□□□ -1.48
VPS52-222ENST00000495981 NLGN1Q8N2Q7 840 aa5.83□□□□□ -1.48
VPS52-222ENST00000495981 FOXD3Q9UJU5 478 aaPredicted RBP5.83□□□□□ -1.48
VPS52-222ENST00000495981 COL11A2P13942 1736 aaPredicted RBP5.82□□□□□ -1.48
VPS52-222ENST00000495981 MYH14Q7Z406 1995 aaKnown RBP5.82□□□□□ -1.48
VPS52-222ENST00000495981 MICAL2O94851 1124 aa5.82□□□□□ -1.48
VPS52-222ENST00000495981 FGRP09769 529 aa5.82□□□□□ -1.48
VPS52-222ENST00000495981 EIF4BP23588 611 aaKnown RBP5.82□□□□□ -1.48
VPS52-222ENST00000495981 GGCXP38435 758 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms