RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 FAM47AQ5JRC9 791 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 MYSM1Q5VVJ2 828 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 FAM200AQ8TCP9 573 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 NOL7Q9UMY1 257 aaKnown RBP12.96□□□□□ -0.33
TBRG4-217ENST00000495973 CYP2D6P10635 497 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 NDUFA8P51970 172 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
TBRG4-217ENST00000495973 C11orf57Q6ZUT1 292 aaPredicted RBP12.95□□□□□ -0.34
TBRG4-217ENST00000495973 SPTLC2O15270 562 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 NMT2O60551 498 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 RPS6KA4O75676 772 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 RCOR1Q9UKL0 485 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 BCL9LQ86UU0 1499 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 LTBP4Q8N2S1 1624 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 USP17L12C9JPN9 530 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 USP17L21D6R901 530 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
TBRG4-217ENST00000495973 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
TBRG4-217ENST00000495973 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
TBRG4-217ENST00000495973 CLIC6Q96NY7 704 aa12.95□□□□□ -0.34
TBRG4-217ENST00000495973 BECN2A8MW95 431 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 NFIXQ14938 502 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 RTN1Q16799 776 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 GOLGA6L19H0YKK7 550 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 TPM2P07951 284 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 MECOMQ03112 1051 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 KRT23Q9C075 422 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 BTBD18B2RXH4 712 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 KIAA2012Q0VF49 1180 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 DZIP1Q86YF9 867 aaKnown RBP12.94□□□□□ -0.34
TBRG4-217ENST00000495973 MRPS27Q92552 414 aaKnown RBP12.94□□□□□ -0.34
TBRG4-217ENST00000495973 TMEM87BQ96K49 555 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 TNKSO95271 1327 aa12.94□□□□□ -0.34
TBRG4-217ENST00000495973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.93□□□□□ -0.34
TBRG4-217ENST00000495973 CDKL5O76039 1030 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 UBE4AQ14139 1066 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 SF3B3Q15393 1217 aaKnown RBP12.93□□□□□ -0.34
TBRG4-217ENST00000495973 DIXDC1Q155Q3 683 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 LINC00301Q8NCQ3 95 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 NRBP1Q9UHY1 535 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 AFF2P51816 1311 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 CNBD1Q8NA66 436 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 ZNF384Q8TF68 577 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 FAM160A1Q05DH4 1040 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 NR5A1Q13285 461 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 LRRC4BQ9NT99 713 aa12.93□□□□□ -0.34
TBRG4-217ENST00000495973 FAM217BQ9NTX9 383 aaPredicted RBP12.93□□□□□ -0.34
TBRG4-217ENST00000495973 ZNF804BA4D1E1 1349 aa12.92□□□□□ -0.34
TBRG4-217ENST00000495973 COL1A1P02452 1464 aaPredicted RBP12.92□□□□□ -0.34
TBRG4-217ENST00000495973 TRIM37O94972 964 aa12.92□□□□□ -0.34
TBRG4-217ENST00000495973 PTGS1P23219 599 aa12.92□□□□□ -0.34
TBRG4-217ENST00000495973 HSPA1LP34931 641 aa12.92□□□□□ -0.34
TBRG4-217ENST00000495973 EVCP57679 992 aa12.92□□□□□ -0.34
TBRG4-217ENST00000495973 AKAP17AQ02040 695 aaKnown RBP12.92□□□□□ -0.34
TBRG4-217ENST00000495973 SNW1Q13573 536 aaKnown RBP12.92□□□□□ -0.34
TBRG4-217ENST00000495973 TRIM22Q8IYM9 498 aa12.92□□□□□ -0.34
TBRG4-217ENST00000495973 ZNF654Q8IZM8 581 aa12.92□□□□□ -0.34
TBRG4-217ENST00000495973 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
TBRG4-217ENST00000495973 MYH7P12883 1935 aa12.92□□□□□ -0.34
TBRG4-217ENST00000495973 COL22A1Q8NFW1 1626 aaPredicted RBP12.92□□□□□ -0.34
TBRG4-217ENST00000495973 WDHD1O75717 1129 aaPredicted RBP12.91□□□□□ -0.34
TBRG4-217ENST00000495973 GNAT2P19087 354 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 PDILTQ8N807 584 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 MCM9Q9NXL9 1143 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 VPS54Q9P1Q0 977 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 SAP30BPQ9UHR5 308 aaKnown RBP12.91□□□□□ -0.34
TBRG4-217ENST00000495973 IGSF3O75054 1194 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 AOPEPQ8N6M6 819 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 ESR2Q92731 530 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 USP17L8P0C7I0 530 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 IFIT1BQ5T764 474 aaKnown RBP12.91□□□□□ -0.34
TBRG4-217ENST00000495973 DIS3L2Q8IYB7 885 aaKnown RBP12.91□□□□□ -0.34
TBRG4-217ENST00000495973 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
TBRG4-217ENST00000495973 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
TBRG4-217ENST00000495973 NRAPQ86VF7 1730 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 USP5P45974 858 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 LRMPQ12912 555 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 GRIK5Q16478 980 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 CCDC186Q7Z3E2 898 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 TICAM2Q86XR7 235 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 OXER1Q8TDS5 423 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 RIOK1Q9BRS2 568 aaKnown RBP12.9□□□□□ -0.34
TBRG4-217ENST00000495973 RNF41Q9H4P4 317 aaPredicted RBP12.9□□□□□ -0.34
TBRG4-217ENST00000495973 FAM205CA6NFA0 338 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 PLEKHA8P1O95397 391 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 PFKFB1P16118 471 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 SAFBQ15424 915 aaKnown RBP eCLIP12.9□□□□□ -0.34
TBRG4-217ENST00000495973 ALX1Q15699 326 aa12.9□□□□□ -0.34
TBRG4-217ENST00000495973 NTRK3Q16288 839 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms