RNA–Protein interactions for RNA: ENST00000495228.1

DUBR-205, DPPA2 upstream binding RNA, humanhuman

TSL 2 BASIC

Gene DUBR, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-205ENST00000495228 CRELD1Q96HD1 420 aa7.05□□□□□ -1.28
DUBR-205ENST00000495228 SRPK1Q96SB4 655 aaKnown RBP7.05□□□□□ -1.28
DUBR-205ENST00000495228 APBA2Q99767 749 aa7.05□□□□□ -1.28
DUBR-205ENST00000495228 SIRPGQ9P1W8 387 aa7.05□□□□□ -1.28
DUBR-205ENST00000495228 PCDHGC3Q9UN70 934 aa7.05□□□□□ -1.28
DUBR-205ENST00000495228 ANKRD36BQ8N2N9 1353 aa7.05□□□□□ -1.28
DUBR-205ENST00000495228 IFRD1O00458 451 aaPredicted RBP7.04□□□□□ -1.28
DUBR-205ENST00000495228 ZNF500O60304 480 aaPredicted RBP7.04□□□□□ -1.28
DUBR-205ENST00000495228 PTCD1O75127 700 aaKnown RBP7.04□□□□□ -1.28
DUBR-205ENST00000495228 NPR3P17342 541 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 FBLN1P23142 703 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 MAN1A1P33908 653 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 SEC13P55735 322 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 RACK1P63244 317 aaKnown RBP7.04□□□□□ -1.28
DUBR-205ENST00000495228 CLDN10P78369 228 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 EHHADHQ08426 723 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 LMOD3Q0VAK6 560 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 PLPP7Q8NBV4 271 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 LTV1Q96GA3 475 aaPredicted RBP7.04□□□□□ -1.28
DUBR-205ENST00000495228 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 SYT17Q9BSW7 474 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 HOMER2Q9NSB8 354 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 LRRC4BQ9NT99 713 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 RBM19Q9Y4C8 960 aaKnown RBP7.04□□□□□ -1.28
DUBR-205ENST00000495228 PCDHGB7Q9Y5F8 929 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 LY75O60449 1722 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 COL24A1Q17RW2 1714 aa7.04□□□□□ -1.28
DUBR-205ENST00000495228 PAPPAQ13219 1627 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 CFAP69A5D8W1 941 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 TNFRSF10BO14763 440 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 NOS2P35228 1153 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 SH3BP2P78314 561 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 MAP7D1Q3KQU3 841 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 MRPL14Q6P1L8 145 aaKnown RBP7.03□□□□□ -1.28
DUBR-205ENST00000495228 TMEM151AQ8N4L1 468 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 HELQQ8TDG4 1101 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 PPM1EQ8WY54 764 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 ZNF512BQ96KM6 892 aaPredicted RBP7.03□□□□□ -1.28
DUBR-205ENST00000495228 TMX4Q9H1E5 349 aaPredicted RBP7.03□□□□□ -1.28
DUBR-205ENST00000495228 RNF19AQ9NV58 838 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 ANAPC4Q9UJX5 808 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 NOD1Q9Y239 953 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 SCINQ9Y6U3 715 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 KIF24Q5T7B8 1368 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 MAP2P11137 1827 aaKnown RBP7.03□□□□□ -1.28
DUBR-205ENST00000495228 MYOM1P52179 1685 aa7.03□□□□□ -1.28
DUBR-205ENST00000495228 SHANK3Q9BYB0 1731 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 KRT18P05783 430 aaKnown RBP7.02□□□□□ -1.29
DUBR-205ENST00000495228 COPB2P35606 906 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 CHMP4BP1P59074 171 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 GUCA2AQ02747 115 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 PTPN12Q05209 780 aaKnown RBP7.02□□□□□ -1.29
DUBR-205ENST00000495228 RRS1Q15050 365 aaKnown RBP7.02□□□□□ -1.29
DUBR-205ENST00000495228 BRD3Q15059 726 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 SYMPKQ92797 1274 aaKnown RBP7.02□□□□□ -1.29
DUBR-205ENST00000495228 CEP63Q96MT8 703 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 PURBQ96QR8 312 aaKnown RBP7.02□□□□□ -1.29
DUBR-205ENST00000495228 MPHOSPH6Q99547 160 aaKnown RBP7.02□□□□□ -1.29
DUBR-205ENST00000495228 NUDT12Q9BQG2 462 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 FHDC1Q9C0D6 1143 aaPredicted RBP7.02□□□□□ -1.29
DUBR-205ENST00000495228 GGNBP2Q9H3C7 697 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 C12orf49Q9H741 205 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 SRA1Q9HD15 236 aaKnown RBP7.02□□□□□ -1.29
DUBR-205ENST00000495228 FANCLQ9NW38 375 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 TLL2Q9Y6L7 1015 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 RTL1A6NKG5 1358 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 INSRP06213 1382 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 USP47Q96K76 1375 aa7.02□□□□□ -1.29
DUBR-205ENST00000495228 KIF20BQ96Q89 1820 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 MAP3K5Q99683 1374 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 DKK1O94907 266 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 GDF11O95390 407 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 FGAP02671 866 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 TATP17735 454 aaPredicted RBP7.01□□□□□ -1.29
DUBR-205ENST00000495228 EXOSC10Q01780 885 aaKnown RBP7.01□□□□□ -1.29
DUBR-205ENST00000495228 RASSF7Q02833 373 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 KCNH2Q12809 1159 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 HLTFQ14527 1009 aaKnown RBP eCLIP7.01□□□□□ -1.29
DUBR-205ENST00000495228 RINLQ6ZS11 566 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 LRP10Q7Z4F1 713 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 KIAA0907Q7Z7F0 614 aaPredicted RBP7.01□□□□□ -1.29
DUBR-205ENST00000495228 RAPGEF4Q8WZA2 1011 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 APPBP2Q92624 585 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 SYTL4Q96C24 671 aaPredicted RBP7.01□□□□□ -1.29
DUBR-205ENST00000495228 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 CARD14Q9BXL6 1004 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 CASS4Q9NQ75 786 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 AVENQ9NQS1 362 aaPredicted RBP7.01□□□□□ -1.29
DUBR-205ENST00000495228 MAP3K20Q9NYL2 800 aaKnown RBP7.01□□□□□ -1.29
DUBR-205ENST00000495228 CLSPNQ9HAW4 1339 aa7.01□□□□□ -1.29
DUBR-205ENST00000495228 ITGB4P16144 1822 aa7□□□□□ -1.29
DUBR-205ENST00000495228 FOSP01100 380 aaPredicted RBP7□□□□□ -1.29
DUBR-205ENST00000495228 GNA15P30679 374 aa7□□□□□ -1.29
DUBR-205ENST00000495228 SCARF1Q14162 830 aa7□□□□□ -1.29
DUBR-205ENST00000495228 PPP2R5AQ15172 486 aa7□□□□□ -1.29
DUBR-205ENST00000495228 ZNF827Q17R98 1081 aa7□□□□□ -1.29
DUBR-205ENST00000495228 ALG1LQ6GMV1 187 aa7□□□□□ -1.29
DUBR-205ENST00000495228 HS2ST1Q7LGA3 356 aa7□□□□□ -1.29
DUBR-205ENST00000495228 WDR75Q8IWA0 830 aaKnown RBP7□□□□□ -1.29
DUBR-205ENST00000495228 SDR16C5Q8N3Y7 309 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms