RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.48■■□□□ 1.03
HDAC4-211ENST00000494800 PIH1D3Q9NQM4 214 aaKnown RBP21.48■■□□□ 1.03
HDAC4-211ENST00000494800 MAST2Q6P0Q8 1798 aa21.47■■□□□ 1.03
HDAC4-211ENST00000494800 ERO1BQ86YB8 467 aa21.47■■□□□ 1.03
HDAC4-211ENST00000494800 ZFPM1Q8IX07 1006 aa21.47■■□□□ 1.03
HDAC4-211ENST00000494800 AATFQ9NY61 560 aaKnown RBP eCLIP21.47■■□□□ 1.03
HDAC4-211ENST00000494800 AKAP11Q9UKA4 1901 aa21.47■■□□□ 1.03
HDAC4-211ENST00000494800 SPDYE5A6NIY4 337 aa21.46■■□□□ 1.03
HDAC4-211ENST00000494800 CYP7A1P22680 504 aa21.46■■□□□ 1.03
HDAC4-211ENST00000494800 GTF2A2P52657 109 aa21.46■■□□□ 1.03
HDAC4-211ENST00000494800 ZKSCAN4Q969J2 545 aaPredicted RBP21.46■■□□□ 1.03
HDAC4-211ENST00000494800 OTUD5Q96G74 571 aa21.46■■□□□ 1.03
HDAC4-211ENST00000494800 DDX4Q9NQI0 724 aaKnown RBP21.46■■□□□ 1.03
HDAC4-211ENST00000494800 PPP4CP60510 307 aa21.45■■□□□ 1.02
HDAC4-211ENST00000494800 IFNL1Q8IU54 200 aa21.45■■□□□ 1.02
HDAC4-211ENST00000494800 SH3RF3Q8TEJ3 882 aaPredicted RBP21.45■■□□□ 1.02
HDAC4-211ENST00000494800 DNAJC2Q99543 621 aaKnown RBP21.45■■□□□ 1.02
HDAC4-211ENST00000494800 DCTPP1Q9H773 170 aa21.45■■□□□ 1.02
HDAC4-211ENST00000494800 ZNF112Q9UJU3 913 aa21.45■■□□□ 1.02
HDAC4-211ENST00000494800 SNCAIPQ9Y6H5 919 aa21.45■■□□□ 1.02
HDAC4-211ENST00000494800 GJA5P36382 358 aa21.44■■□□□ 1.02
HDAC4-211ENST00000494800 MAGEB6Q8N7X4 407 aa21.44■■□□□ 1.02
HDAC4-211ENST00000494800 GPATCH3Q96I76 525 aa21.44■■□□□ 1.02
HDAC4-211ENST00000494800 OSBPL5Q9H0X9 879 aaPredicted RBP21.44■■□□□ 1.02
HDAC4-211ENST00000494800 NDUFB9Q9Y6M9 179 aa21.44■■□□□ 1.02
HDAC4-211ENST00000494800 OTOFQ9HC10 1997 aa21.44■■□□□ 1.02
HDAC4-211ENST00000494800 DDTLA6NHG4 134 aaPredicted RBP21.43■■□□□ 1.02
HDAC4-211ENST00000494800 TBC1D8O95759 1140 aa21.43■■□□□ 1.02
HDAC4-211ENST00000494800 ATP5JP18859 108 aa21.43■■□□□ 1.02
HDAC4-211ENST00000494800 PPATQ06203 517 aa21.43■■□□□ 1.02
HDAC4-211ENST00000494800 AAMPQ13685 434 aa21.43■■□□□ 1.02
HDAC4-211ENST00000494800 CRBNQ96SW2 442 aa21.43■■□□□ 1.02
HDAC4-211ENST00000494800 CFHR5Q9BXR6 569 aa21.43■■□□□ 1.02
HDAC4-211ENST00000494800 DHX36Q9H2U1 1008 aaKnown RBP21.43■■□□□ 1.02
HDAC4-211ENST00000494800 ANTXR1Q9H6X2 564 aa21.43■■□□□ 1.02
HDAC4-211ENST00000494800 ATRNL1Q5VV63 1379 aa21.43■■□□□ 1.02
HDAC4-211ENST00000494800 COL2A1P02458 1487 aaPredicted RBP21.43■■□□□ 1.02
HDAC4-211ENST00000494800 TESPA1A2RU30 521 aaPredicted RBP21.42■■□□□ 1.02
HDAC4-211ENST00000494800 GOLIM4O00461 696 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 INPP5BP32019 993 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 PPIL2Q13356 520 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 SNAPC2Q13487 334 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 NOL9Q5SY16 702 aaKnown RBP21.42■■□□□ 1.02
HDAC4-211ENST00000494800 AK9Q5TCS8 1911 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 SH3BP5LQ7L8J4 393 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 ADGRA1Q86SQ6 560 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 CNKSR2Q8WXI2 1034 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 PICK1Q9NRD5 415 aa21.42■■□□□ 1.02
HDAC4-211ENST00000494800 ZBTB47Q9UFB7 747 aaPredicted RBP21.42■■□□□ 1.02
HDAC4-211ENST00000494800 CCL15-CCL14A0A0B4J2E2 113 aa21.41■■□□□ 1.02
HDAC4-211ENST00000494800 TBC1D12O60347 775 aa21.41■■□□□ 1.02
HDAC4-211ENST00000494800 CETPP11597 493 aa21.41■■□□□ 1.02
HDAC4-211ENST00000494800 CCL15Q16663 113 aa21.41■■□□□ 1.02
HDAC4-211ENST00000494800 NOM1Q5C9Z4 860 aaKnown RBP21.41■■□□□ 1.02
HDAC4-211ENST00000494800 TGFBRAP1Q8WUH2 860 aa21.41■■□□□ 1.02
HDAC4-211ENST00000494800 PCDHB15Q9Y5E8 787 aa21.41■■□□□ 1.02
HDAC4-211ENST00000494800 SMARCA5O60264 1052 aaPredicted RBP21.4■■□□□ 1.02
HDAC4-211ENST00000494800 MAP3K10Q02779 954 aa21.4■■□□□ 1.02
HDAC4-211ENST00000494800 SLC9C2Q5TAH2 1124 aa21.4■■□□□ 1.02
HDAC4-211ENST00000494800 MIGA1Q8NAN2 632 aa21.4■■□□□ 1.02
HDAC4-211ENST00000494800 MS4A4AQ96JQ5 239 aa21.4■■□□□ 1.02
HDAC4-211ENST00000494800 TRIM34Q9BYJ4 488 aa21.4■■□□□ 1.02
HDAC4-211ENST00000494800 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.4■■□□□ 1.02
HDAC4-211ENST00000494800 BOLA2Q9H3K6 86 aa21.4■■□□□ 1.02
HDAC4-211ENST00000494800 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.4■■□□□ 1.021e-6■■■■■ 29.3
HDAC4-211ENST00000494800 PAG1Q9NWQ8 432 aa21.4■■□□□ 1.02
HDAC4-211ENST00000494800 DOCK2Q92608 1830 aa21.4■■□□□ 1.02
HDAC4-211ENST00000494800 FLT1P17948 1338 aa21.39■■□□□ 1.01
HDAC4-211ENST00000494800 IGF2BP3O00425 579 aaKnown RBP eCLIP21.39■■□□□ 1.01
HDAC4-211ENST00000494800 CTNND1O60716 968 aaKnown RBP21.39■■□□□ 1.01
HDAC4-211ENST00000494800 MAPKAPK5Q8IW41 473 aa21.39■■□□□ 1.01
HDAC4-211ENST00000494800 SCYL3Q8IZE3 742 aa21.39■■□□□ 1.01
HDAC4-211ENST00000494800 HAUS7Q99871 368 aa21.39■■□□□ 1.01
HDAC4-211ENST00000494800 ECHDC1Q9NTX5 307 aa21.39■■□□□ 1.01
HDAC4-211ENST00000494800 PI4KBQ9UBF8 816 aa21.39■■□□□ 1.01
HDAC4-211ENST00000494800 HERC5Q9UII4 1024 aaKnown RBP21.39■■□□□ 1.01
HDAC4-211ENST00000494800 PHF20L1A8MW92 1017 aa21.38■■□□□ 1.01
HDAC4-211ENST00000494800 GPR25O00155 361 aa21.38■■□□□ 1.01
HDAC4-211ENST00000494800 IRF6O14896 467 aa21.38■■□□□ 1.01
HDAC4-211ENST00000494800 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
HDAC4-211ENST00000494800 USP5P45974 858 aa21.38■■□□□ 1.01
HDAC4-211ENST00000494800 MAGEB6P1A0A0J9YX57 407 aa21.37■■□□□ 1.01
HDAC4-211ENST00000494800 PDE6AP16499 860 aa21.37■■□□□ 1.01
HDAC4-211ENST00000494800 DYNLL1P63167 89 aaKnown RBP21.37■■□□□ 1.01
HDAC4-211ENST00000494800 DGKZQ13574 1117 aa21.37■■□□□ 1.01
HDAC4-211ENST00000494800 ZNF296Q8WUU4 475 aaPredicted RBP21.37■■□□□ 1.01
HDAC4-211ENST00000494800 BRI3BPQ8WY22 251 aa21.37■■□□□ 1.01
HDAC4-211ENST00000494800 LAMB1P07942 1786 aa21.37■■□□□ 1.01
HDAC4-211ENST00000494800 FKTNO75072 461 aa21.36■■□□□ 1.01
HDAC4-211ENST00000494800 ZSCAN25Q6NSZ9 544 aa21.36■■□□□ 1.01
HDAC4-211ENST00000494800 CRACR2BQ8N4Y2 399 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-211ENST00000494800 PTPN18Q99952 460 aa21.36■■□□□ 1.01
HDAC4-211ENST00000494800 ZCCHC17Q9NP64 241 aaKnown RBP21.36■■□□□ 1.01
HDAC4-211ENST00000494800 ZNF532Q9HCE3 1301 aa21.35■■□□□ 1.01
HDAC4-211ENST00000494800 CTU1Q7Z7A3 348 aaKnown RBP21.35■■□□□ 1.01
HDAC4-211ENST00000494800 FOXP4Q8IVH2 680 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-211ENST00000494800 ZFYVE28Q9HCC9 887 aa21.35■■□□□ 1.01
HDAC4-211ENST00000494800 CXCL11O14625 94 aa21.34■■□□□ 1.01
HDAC4-211ENST00000494800 CAPN15O75808 1086 aa21.34■■□□□ 1.01
HDAC4-211ENST00000494800 PTPRAP18433 802 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms