RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 CCNG1P51959 295 aa5.46□□□□□ -1.54
PRKD3-210ENST00000494667 NAP1L1P55209 391 aaKnown RBP5.46□□□□□ -1.54
PRKD3-210ENST00000494667 PTH1RQ03431 593 aa5.46□□□□□ -1.54
PRKD3-210ENST00000494667 ALS2CLQ60I27 953 aa5.46□□□□□ -1.54
PRKD3-210ENST00000494667 KDM7AQ6ZMT4 941 aa5.46□□□□□ -1.54
PRKD3-210ENST00000494667 TRAPPC11Q7Z392 1133 aa5.46□□□□□ -1.54
PRKD3-210ENST00000494667 SDCCAG8Q86SQ7 713 aaPredicted RBP5.46□□□□□ -1.54
PRKD3-210ENST00000494667 CTAGE6Q86UF2 777 aa5.46□□□□□ -1.54
PRKD3-210ENST00000494667 CTAGE4Q8IX94 777 aa5.46□□□□□ -1.54
PRKD3-210ENST00000494667 KCNG4Q8TDN1 519 aa5.46□□□□□ -1.54
PRKD3-210ENST00000494667 SMARCC1Q92922 1105 aaPredicted RBP5.46□□□□□ -1.54
PRKD3-210ENST00000494667 NUCKS1Q9H1E3 243 aaKnown RBP5.46□□□□□ -1.54
PRKD3-210ENST00000494667 DNAJC8O75937 253 aaPredicted RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 TOP1P11387 765 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CCNHP51946 323 aaPredicted RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 NBPF14Q5TI25 921 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 SPECC1LQ69YQ0 1117 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 TOGARAM2Q6ZUX3 1019 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 ILDR1Q86SU0 546 aaPredicted RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CCHCR1Q8TD31 782 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 EVI5LQ96CN4 794 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 DDX20Q9UHI6 824 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CORO1CQ9ULV4 474 aaPredicted RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CTAGE9A4FU28 777 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 C5orf60A6NFR6 353 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 PSMD14O00487 310 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 SEMA3EO15041 775 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CMA1P23946 247 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 MAGEA8P43361 318 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 UBASH3AP57075 661 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 STIM1Q13586 685 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 RBBP5Q15291 538 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 SNCBQ16143 134 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 FAM228AQ86W67 206 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 MICAL1Q8TDZ2 1067 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 BRF1Q92994 677 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CAVIN3Q969G5 261 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 MMTAG2Q9BU76 263 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 MRPL44Q9H9J2 332 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CAPN7Q9Y6W3 813 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 LMTK3Q96Q04 1460 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 BCL9O00512 1426 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 ERICH2A1L162 156 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 GNL2Q13823 731 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 SETDB1Q15047 1291 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 PAPD7Q5XG87 772 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 FAM43BQ6ZT52 329 aaPredicted RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 MFN1Q8IWA4 741 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 FSIP1Q8NA03 581 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 RHPN1Q8TCX5 695 aa5.45□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC12Q8WUD4 166 aaPredicted RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 TFIP11Q9UBB9 837 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 RBM8AQ9Y5S9 174 aaKnown RBP5.45□□□□□ -1.54
PRKD3-210ENST00000494667 KIF5CO60282 957 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 NEBLO76041 1014 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 ALADP13716 330 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 RAB27AP51159 221 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 G3BP1Q13283 466 aaKnown RBP eCLIP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 FAM173BQ6P4H8 233 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 BLOC1S2Q6QNY1 142 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 MREGQ8N565 214 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 NBPF15Q8N660 670 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 LINC00301Q8NCQ3 95 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC102AQ96A19 550 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 NAPGQ99747 312 aaPredicted RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 EPN3Q9H201 632 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 GGNBP2Q9H3C7 697 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 TBC1D2BQ9UPU7 963 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 UBN2Q6ZU65 1347 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CHD1O14646 1710 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 ALKQ9UM73 1620 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 A0A1B0GTH6 734 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 OPA1O60313 960 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 EZRP15311 586 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 NR1I3Q14994 352 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CEP85LQ5SZL2 805 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 PARP9Q8IXQ6 854 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 NECAB1Q8N987 351 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC148Q8NFR7 591 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 SLC40A1Q9NP59 571 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 PCDHA7Q9UN72 937 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 RPS6KL1Q9Y6S9 549 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 RIMS1Q86UR5 1692 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 GOLGA6CA6NDK9 693 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 KIAA0754O94854 1291 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 GOLGA6DP0CG33 693 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC38Q502W7 563 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 PRPF40BQ6NWY9 871 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CCNI2Q6ZMN8 369 aaPredicted RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 ARMC9Q7Z3E5 817 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 HDGFL2Q7Z4V5 671 aaPredicted RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 FERMT3Q86UX7 667 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 RBM12BQ8IXT5 1001 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC13Q8IYE1 715 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 NSUN7Q8NE18 718 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CFAP61Q8NHU2 1237 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 ENOX1Q8TC92 643 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 BCAS4Q8TDM0 211 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms