RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.13■□□□□ 0.17
ERCC3-209ENST00000494464 ZNF112Q9UJU3 913 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 IGF2BP3O00425 579 aaKnown RBP eCLIP16.13■□□□□ 0.17
ERCC3-209ENST00000494464 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
ERCC3-209ENST00000494464 AACSQ86V21 672 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 ERO1BQ86YB8 467 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 MS4A4AQ96JQ5 239 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 MCOLN1Q9GZU1 580 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 SNRKQ9NRH2 765 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
ERCC3-209ENST00000494464 CAPN15O75808 1086 aa16.12■□□□□ 0.17
ERCC3-209ENST00000494464 TBC1D8O95759 1140 aa16.12■□□□□ 0.17
ERCC3-209ENST00000494464 ZAP70P43403 619 aa16.12■□□□□ 0.17
ERCC3-209ENST00000494464 GTF2A2P52657 109 aa16.12■□□□□ 0.17
ERCC3-209ENST00000494464 MIGA2Q7L4E1 593 aa16.12■□□□□ 0.17
ERCC3-209ENST00000494464 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
ERCC3-209ENST00000494464 ZKSCAN4Q969J2 545 aaPredicted RBP16.12■□□□□ 0.17
ERCC3-209ENST00000494464 OTUD5Q96G74 571 aa16.12■□□□□ 0.17
ERCC3-209ENST00000494464 DDX4Q9NQI0 724 aaKnown RBP16.12■□□□□ 0.17
ERCC3-209ENST00000494464 GPR25O00155 361 aa16.11■□□□□ 0.17
ERCC3-209ENST00000494464 RAB11FIP3O75154 756 aa16.11■□□□□ 0.17
ERCC3-209ENST00000494464 MAP3K10Q02779 954 aa16.11■□□□□ 0.17
ERCC3-209ENST00000494464 PPIL2Q13356 520 aa16.11■□□□□ 0.17
ERCC3-209ENST00000494464 DGKZQ13574 1117 aa16.11■□□□□ 0.17
ERCC3-209ENST00000494464 NOL9Q5SY16 702 aaKnown RBP16.11■□□□□ 0.17
ERCC3-209ENST00000494464 OTUD7BQ6GQQ9 843 aa16.11■□□□□ 0.17
ERCC3-209ENST00000494464 NAA16Q6N069 864 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-209ENST00000494464 ZNF296Q8WUU4 475 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-209ENST00000494464 INPP5BP32019 993 aa16.1■□□□□ 0.17
ERCC3-209ENST00000494464 PICALMQ13492 652 aa16.1■□□□□ 0.17
ERCC3-209ENST00000494464 SH3BP5LQ7L8J4 393 aa16.1■□□□□ 0.17
ERCC3-209ENST00000494464 CTU1Q7Z7A3 348 aaKnown RBP16.1■□□□□ 0.17
ERCC3-209ENST00000494464 CLASRPQ8N2M8 674 aaKnown RBP16.1■□□□□ 0.17
ERCC3-209ENST00000494464 PTPN18Q99952 460 aa16.1■□□□□ 0.17
ERCC3-209ENST00000494464 NOL10Q9BSC4 688 aaKnown RBP16.1■□□□□ 0.17
ERCC3-209ENST00000494464 IL1RAPL2Q9NP60 686 aa16.1■□□□□ 0.17
ERCC3-209ENST00000494464 SIPA1L1O43166 1804 aa16.09■□□□□ 0.17
ERCC3-209ENST00000494464 CCL15-CCL14A0A0B4J2E2 113 aa16.09■□□□□ 0.17
ERCC3-209ENST00000494464 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
ERCC3-209ENST00000494464 PLCG2P16885 1265 aa16.09■□□□□ 0.17
ERCC3-209ENST00000494464 PPP4CP60510 307 aa16.09■□□□□ 0.17
ERCC3-209ENST00000494464 PPATQ06203 517 aa16.09■□□□□ 0.17
ERCC3-209ENST00000494464 CCL15Q16663 113 aa16.09■□□□□ 0.17
ERCC3-209ENST00000494464 TMED8Q6PL24 325 aaPredicted RBP16.09■□□□□ 0.17
ERCC3-209ENST00000494464 ZSCAN29Q8IWY8 852 aaPredicted RBP16.09■□□□□ 0.17
ERCC3-209ENST00000494464 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
ERCC3-209ENST00000494464 R3HDMLQ9H3Y0 253 aa16.09■□□□□ 0.17
ERCC3-209ENST00000494464 PIH1D3Q9NQM4 214 aaKnown RBP16.09■□□□□ 0.17
ERCC3-209ENST00000494464 IRF6O14896 467 aa16.08■□□□□ 0.16
ERCC3-209ENST00000494464 FKTNO75072 461 aa16.08■□□□□ 0.16
ERCC3-209ENST00000494464 BAG3O95817 575 aa16.08■□□□□ 0.16
ERCC3-209ENST00000494464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.08■□□□□ 0.16
ERCC3-209ENST00000494464 OSBPL5Q9H0X9 879 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-209ENST00000494464 ZCCHC17Q9NP64 241 aaKnown RBP16.08■□□□□ 0.16
ERCC3-209ENST00000494464 PHIPQ8WWQ0 1821 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 ATAD5Q96QE3 1844 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 PHF20L1A8MW92 1017 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 TBC1D12O60347 775 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 CETPP11597 493 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 CRHR2Q13324 411 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 SNAPC2Q13487 334 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 ADGRA1Q86SQ6 560 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 TEX11Q8IYF3 940 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 EXOC6Q8TAG9 804 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 AATFQ9NY61 560 aaKnown RBP eCLIP16.07■□□□□ 0.16
ERCC3-209ENST00000494464 PTPRFP10586 1907 aa16.07■□□□□ 0.16
ERCC3-209ENST00000494464 IFIT2P09913 472 aaKnown RBP16.06■□□□□ 0.16
ERCC3-209ENST00000494464 CERS3Q8IU89 383 aa16.06■□□□□ 0.16
ERCC3-209ENST00000494464 SCYL3Q8IZE3 742 aa16.06■□□□□ 0.16
ERCC3-209ENST00000494464 SH3RF3Q8TEJ3 882 aaPredicted RBP16.06■□□□□ 0.16
ERCC3-209ENST00000494464 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
ERCC3-209ENST00000494464 KCNH4Q9UQ05 1017 aa16.06■□□□□ 0.16
ERCC3-209ENST00000494464 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
ERCC3-209ENST00000494464 APBB1O00213 710 aa16.05■□□□□ 0.16
ERCC3-209ENST00000494464 IDH1O75874 414 aaKnown RBP16.05■□□□□ 0.16
ERCC3-209ENST00000494464 MAP3K12Q12852 859 aa16.05■□□□□ 0.16
ERCC3-209ENST00000494464 TTF1Q15361 905 aaPredicted RBP16.05■□□□□ 0.16
ERCC3-209ENST00000494464 PKN2Q16513 984 aaKnown RBP16.05■□□□□ 0.16
ERCC3-209ENST00000494464 FAM43AQ8N2R8 423 aa16.05■□□□□ 0.16
ERCC3-209ENST00000494464 ANTXR1Q9H6X2 564 aa16.05■□□□□ 0.16
ERCC3-209ENST00000494464 FLT1P17948 1338 aa16.04■□□□□ 0.16
ERCC3-209ENST00000494464 CYP7A1P22680 504 aa16.04■□□□□ 0.16
ERCC3-209ENST00000494464 CRBNQ96SW2 442 aa16.04■□□□□ 0.16
ERCC3-209ENST00000494464 DHX36Q9H2U1 1008 aaKnown RBP16.04■□□□□ 0.16
ERCC3-209ENST00000494464 NDUFB9Q9Y6M9 179 aa16.04■□□□□ 0.16
ERCC3-209ENST00000494464 CTNND1O60716 968 aaKnown RBP16.03■□□□□ 0.16
ERCC3-209ENST00000494464 TAF1CQ15572 869 aaPredicted RBP16.03■□□□□ 0.16
ERCC3-209ENST00000494464 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
ERCC3-209ENST00000494464 LRRCC1Q9C099 1032 aa16.03■□□□□ 0.16
ERCC3-209ENST00000494464 ZFYVE28Q9HCC9 887 aa16.03■□□□□ 0.16
ERCC3-209ENST00000494464 PICK1Q9NRD5 415 aa16.03■□□□□ 0.16
ERCC3-209ENST00000494464 HERC5Q9UII4 1024 aaKnown RBP16.03■□□□□ 0.16
ERCC3-209ENST00000494464 MYH1P12882 1939 aa16.03■□□□□ 0.16
ERCC3-209ENST00000494464 MYH7P12883 1935 aa16.03■□□□□ 0.16
ERCC3-209ENST00000494464 NAV1Q8NEY1 1877 aa16.03■□□□□ 0.16
ERCC3-209ENST00000494464 BTBD19C9JJ37 291 aa16.02■□□□□ 0.16
ERCC3-209ENST00000494464 CXCL11O14625 94 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms