RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 COL6A1P12109 1028 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 GYG1P46976 350 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 PI4KAP1Q8N8J0 262 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 TDRD7Q8NHU6 1098 aaKnown RBP8.71□□□□□ -1.02
FN1-225ENST00000494446 TEKT1Q969V4 418 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 PRKAG2Q9UGJ0 569 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 ZNF112Q9UJU3 913 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 MUC6Q6W4X9 2439 aa8.71□□□□□ -1.02
FN1-225ENST00000494446 RLFQ13129 1914 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 A0A0G2JLL6 359 aaPredicted RBP8.7□□□□□ -1.02
FN1-225ENST00000494446 NEURL1BA8MQ27 555 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 HIBADHP31937 336 aaKnown RBP8.7□□□□□ -1.02
FN1-225ENST00000494446 HDLBPQ00341 1268 aaKnown RBP8.7□□□□□ -1.02
FN1-225ENST00000494446 TCP10Q12799 353 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 CHAF1AQ13111 956 aaPredicted RBP8.7□□□□□ -1.02
FN1-225ENST00000494446 NOL9Q5SY16 702 aaKnown RBP8.7□□□□□ -1.02
FN1-225ENST00000494446 C9orf50Q5SZB4 431 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 FKBP1CQ5VVH2 108 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 KSR2Q6VAB6 950 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 PRRT2Q7Z6L0 340 aaPredicted RBP8.7□□□□□ -1.02
FN1-225ENST00000494446 ADAMTS19Q8TE59 1207 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 PPM1EQ8WY54 764 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 IQSEC3Q9UPP2 1182 aaPredicted RBP8.7□□□□□ -1.02
FN1-225ENST00000494446 TRIM35Q9UPQ4 493 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 ZHX2Q9Y6X8 837 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 ATAD5Q96QE3 1844 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 RPAP1Q9BWH6 1393 aaPredicted RBP8.7□□□□□ -1.02
FN1-225ENST00000494446 PLXNA1Q9UIW2 1896 aa8.7□□□□□ -1.02
FN1-225ENST00000494446 SMAD3P84022 425 aaKnown RBP8.69□□□□□ -1.02
FN1-225ENST00000494446 IFIT5Q13325 482 aaKnown RBP8.69□□□□□ -1.02
FN1-225ENST00000494446 CCDC146Q8IYE0 955 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 FAM151AQ8WW52 585 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 TRIB2Q92519 343 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 ZDHHC15Q96MV8 337 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 UHRF1Q96T88 793 aaPredicted RBP8.69□□□□□ -1.02
FN1-225ENST00000494446 PLA2G12BQ9BX93 195 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 SENP6Q9GZR1 1112 aaPredicted RBP8.69□□□□□ -1.02
FN1-225ENST00000494446 PICK1Q9NRD5 415 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 CNNM1Q9NRU3 951 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 GJD2Q9UKL4 321 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 SLC45A1Q9Y2W3 748 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 SYNGAP1Q96PV0 1343 aa8.69□□□□□ -1.02
FN1-225ENST00000494446 FRAT2O75474 233 aaPredicted RBP8.68□□□□□ -1.02
FN1-225ENST00000494446 CYP2B6P20813 491 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 ATN1P54259 1190 aaPredicted RBP8.68□□□□□ -1.02
FN1-225ENST00000494446 GCKRQ14397 625 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 FAM110CQ1W6H9 321 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 CCDC30Q5VVM6 783 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 APOBEC3HQ6NTF7 200 aaKnown RBP8.68□□□□□ -1.02
FN1-225ENST00000494446 LDHAL6AQ6ZMR3 332 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 IL27Q8NEV9 243 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 ATXN2LQ8WWM7 1075 aaKnown RBP8.68□□□□□ -1.02
FN1-225ENST00000494446 ZNF594Q96JF6 807 aaPredicted RBP8.68□□□□□ -1.02
FN1-225ENST00000494446 FAM84BQ96KN1 310 aaPredicted RBP8.68□□□□□ -1.02
FN1-225ENST00000494446 HCN4Q9Y3Q4 1203 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 AFG3L2Q9Y4W6 797 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 LOC285556D6RIA3 1793 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 MYH2Q9UKX2 1941 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 CACNA1FO60840 1977 aa8.68□□□□□ -1.02
FN1-225ENST00000494446 TRIM75PA6NK02 468 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 CCND3P30281 292 aaPredicted RBP8.67□□□□□ -1.02
FN1-225ENST00000494446 ZEB1P37275 1124 aaPredicted RBP8.67□□□□□ -1.02
FN1-225ENST00000494446 CACNB2Q08289 660 aaPredicted RBP8.67□□□□□ -1.02
FN1-225ENST00000494446 PDE3AQ14432 1141 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 TAF7LQ5H9L4 462 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 MAP3K21Q5TCX8 1036 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 VPS37DQ86XT2 251 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 SCYL3Q8IZE3 742 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 SPDYE1Q8NFV5 336 aaPredicted RBP8.67□□□□□ -1.02
FN1-225ENST00000494446 TBC1D22AQ8WUA7 517 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 ASB2Q96Q27 587 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 C1QTNF1Q9BXJ1 281 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 PNMA3Q9UL41 463 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 AGTPBP1Q9UPW5 1226 aa8.67□□□□□ -1.02
FN1-225ENST00000494446 PTPRAP18433 802 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 CASP7P55210 303 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 RTP1P59025 263 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 MRPS5P82675 430 aaKnown RBP8.66□□□□□ -1.02
FN1-225ENST00000494446 UBE4AQ14139 1066 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 TREML2Q5T2D2 321 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 ALYREFQ86V81 257 aaKnown RBP8.66□□□□□ -1.02
FN1-225ENST00000494446 C8orf58Q8NAV2 365 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 BADQ92934 168 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 PRDM5Q9NQX1 630 aaPredicted RBP8.66□□□□□ -1.02
FN1-225ENST00000494446 THEGQ9P2T0 379 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 ATP11BQ9Y2G3 1177 aa8.66□□□□□ -1.02
FN1-225ENST00000494446 MAST3O60307 1309 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 PHF20L1A8MW92 1017 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 ZKSCAN1P17029 563 aaPredicted RBP8.65□□□□□ -1.02
FN1-225ENST00000494446 GCLCP48506 637 aaPredicted RBP8.65□□□□□ -1.02
FN1-225ENST00000494446 FOXO4P98177 505 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 CCDC57Q2TAC2 916 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 HHIPL2Q6UWX4 724 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 CCDC84Q86UT8 332 aaPredicted RBP8.65□□□□□ -1.02
FN1-225ENST00000494446 SNX27Q96L92 541 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 NUDT12Q9BQG2 462 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 MRIQ9BWK5 157 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms