RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 ZNF296Q8WUU4 475 aaPredicted RBP8.84□□□□□ -0.99
RBM39-239ENST00000494274 ZNF512BQ96KM6 892 aaPredicted RBP8.84□□□□□ -0.99
RBM39-239ENST00000494274 MCOLN1Q9GZU1 580 aa8.84□□□□□ -0.99
RBM39-239ENST00000494274 PIH1D3Q9NQM4 214 aaKnown RBP8.84□□□□□ -0.99
RBM39-239ENST00000494274 AATFQ9NY61 560 aaKnown RBP eCLIP8.84□□□□□ -0.99
RBM39-239ENST00000494274 SNCAIPQ9Y6H5 919 aa8.84□□□□□ -0.99
RBM39-239ENST00000494274 CCDC85CA6NKD9 419 aa8.83□□□□□ -1
RBM39-239ENST00000494274 IRF6O14896 467 aa8.83□□□□□ -1
RBM39-239ENST00000494274 CYP7A1P22680 504 aa8.83□□□□□ -1
RBM39-239ENST00000494274 GTF2A2P52657 109 aa8.83□□□□□ -1
RBM39-239ENST00000494274 RHBDL3P58872 404 aa8.83□□□□□ -1
RBM39-239ENST00000494274 SH3BP5LQ7L8J4 393 aa8.83□□□□□ -1
RBM39-239ENST00000494274 SH3RF3Q8TEJ3 882 aaPredicted RBP8.83□□□□□ -1
RBM39-239ENST00000494274 MS4A4AQ96JQ5 239 aa8.83□□□□□ -1
RBM39-239ENST00000494274 PTPN18Q99952 460 aa8.83□□□□□ -1
RBM39-239ENST00000494274 ANTXR1Q9H6X2 564 aa8.83□□□□□ -1
RBM39-239ENST00000494274 PAPPA2Q9BXP8 1791 aa8.83□□□□□ -1
RBM39-239ENST00000494274 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
RBM39-239ENST00000494274 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
RBM39-239ENST00000494274 FKTNO75072 461 aa8.82□□□□□ -1
RBM39-239ENST00000494274 DYNLL1P63167 89 aaKnown RBP8.82□□□□□ -1
RBM39-239ENST00000494274 PPATQ06203 517 aa8.82□□□□□ -1
RBM39-239ENST00000494274 SNAPC2Q13487 334 aa8.82□□□□□ -1
RBM39-239ENST00000494274 CTU1Q7Z7A3 348 aaKnown RBP8.82□□□□□ -1
RBM39-239ENST00000494274 ADGRA1Q86SQ6 560 aa8.82□□□□□ -1
RBM39-239ENST00000494274 MAPKAPK5Q8IW41 473 aa8.82□□□□□ -1
RBM39-239ENST00000494274 MAGEB6Q8N7X4 407 aa8.82□□□□□ -1
RBM39-239ENST00000494274 MIGA1Q8NAN2 632 aa8.82□□□□□ -1
RBM39-239ENST00000494274 TGFBRAP1Q8WUH2 860 aa8.82□□□□□ -1
RBM39-239ENST00000494274 BRI3BPQ8WY22 251 aa8.82□□□□□ -1
RBM39-239ENST00000494274 DNAJC2Q99543 621 aaKnown RBP8.82□□□□□ -1
RBM39-239ENST00000494274 BOLA2Q9H3K6 86 aa8.82□□□□□ -1
RBM39-239ENST00000494274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.82□□□□□ -1
RBM39-239ENST00000494274 ZNF112Q9UJU3 913 aa8.82□□□□□ -1
RBM39-239ENST00000494274 TRPM7Q96QT4 1865 aa8.82□□□□□ -1
RBM39-239ENST00000494274 PSME4Q14997 1843 aa8.82□□□□□ -1
RBM39-239ENST00000494274 POLR2AP24928 1970 aaKnown RBP8.81□□□□□ -1
RBM39-239ENST00000494274 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
RBM39-239ENST00000494274 FAM196BA6NMK8 535 aa8.81□□□□□ -1
RBM39-239ENST00000494274 GOLIM4O00461 696 aa8.81□□□□□ -1
RBM39-239ENST00000494274 MAP4K4O95819 1239 aaPredicted RBP8.81□□□□□ -1
RBM39-239ENST00000494274 CETPP11597 493 aa8.81□□□□□ -1
RBM39-239ENST00000494274 PLCG2P16885 1265 aa8.81□□□□□ -1
RBM39-239ENST00000494274 RRP1P56182 461 aaKnown RBP8.81□□□□□ -1
RBM39-239ENST00000494274 PPP4CP60510 307 aa8.81□□□□□ -1
RBM39-239ENST00000494274 MAP3K12Q12852 859 aa8.81□□□□□ -1
RBM39-239ENST00000494274 CRHR2Q13324 411 aa8.81□□□□□ -1
RBM39-239ENST00000494274 TAF1CQ15572 869 aaPredicted RBP8.81□□□□□ -1
RBM39-239ENST00000494274 FAM43AQ8N2R8 423 aa8.81□□□□□ -1
RBM39-239ENST00000494274 LRRCC1Q9C099 1032 aa8.81□□□□□ -1
RBM39-239ENST00000494274 OSBPL5Q9H0X9 879 aaPredicted RBP8.81□□□□□ -1
RBM39-239ENST00000494274 PICK1Q9NRD5 415 aa8.81□□□□□ -1
RBM39-239ENST00000494274 ZHX2Q9Y6X8 837 aa8.81□□□□□ -1
RBM39-239ENST00000494274 PHF20L1A8MW92 1017 aa8.8□□□□□ -1
RBM39-239ENST00000494274 BTBD19C9JJ37 291 aa8.8□□□□□ -1
RBM39-239ENST00000494274 CTNND1O60716 968 aaKnown RBP8.8□□□□□ -1
RBM39-239ENST00000494274 MAP3K10Q02779 954 aa8.8□□□□□ -1
RBM39-239ENST00000494274 PPIL2Q13356 520 aa8.8□□□□□ -1
RBM39-239ENST00000494274 TTF1Q15361 905 aaPredicted RBP8.8□□□□□ -1
RBM39-239ENST00000494274 SLC4A8Q2Y0W8 1093 aa8.8□□□□□ -1
RBM39-239ENST00000494274 SLC9C2Q5TAH2 1124 aa8.8□□□□□ -1
RBM39-239ENST00000494274 EDC3Q96F86 508 aaKnown RBP8.8□□□□□ -1
RBM39-239ENST00000494274 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
RBM39-239ENST00000494274 TRIM34Q9BYJ4 488 aa8.8□□□□□ -1
RBM39-239ENST00000494274 ZFYVE28Q9HCC9 887 aa8.8□□□□□ -1
RBM39-239ENST00000494274 SAP30BPQ9UHR5 308 aaKnown RBP8.8□□□□□ -1
RBM39-239ENST00000494274 PALD1Q9ULE6 856 aa8.8□□□□□ -1
RBM39-239ENST00000494274 RPAP1Q9BWH6 1393 aaPredicted RBP8.8□□□□□ -1
RBM39-239ENST00000494274 IGSF3O75054 1194 aa8.79□□□□□ -1
RBM39-239ENST00000494274 ECM2O94769 699 aaPredicted RBP8.79□□□□□ -1
RBM39-239ENST00000494274 PTPRAP18433 802 aa8.79□□□□□ -1
RBM39-239ENST00000494274 USP5P45974 858 aa8.79□□□□□ -1
RBM39-239ENST00000494274 SP3Q02447 781 aa8.79□□□□□ -1
RBM39-239ENST00000494274 NOL9Q5SY16 702 aaKnown RBP8.79□□□□□ -1
RBM39-239ENST00000494274 CCDC84Q86UT8 332 aaPredicted RBP8.79□□□□□ -1
RBM39-239ENST00000494274 SCYL3Q8IZE3 742 aa8.79□□□□□ -1
RBM39-239ENST00000494274 CRACR2BQ8N4Y2 399 aaPredicted RBP8.79□□□□□ -1
RBM39-239ENST00000494274 CRBNQ96SW2 442 aa8.79□□□□□ -1
RBM39-239ENST00000494274 DHX36Q9H2U1 1008 aaKnown RBP8.79□□□□□ -1
RBM39-239ENST00000494274 DCTPP1Q9H773 170 aa8.79□□□□□ -1
RBM39-239ENST00000494274 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.79□□□□□ -1
RBM39-239ENST00000494274 PI4KBQ9UBF8 816 aa8.79□□□□□ -1
RBM39-239ENST00000494274 PCDHB15Q9Y5E8 787 aa8.79□□□□□ -1
RBM39-239ENST00000494274 ZNF646O15015 1829 aaPredicted RBP8.79□□□□□ -1
RBM39-239ENST00000494274 A0A1B0GUL6 1792 aa8.78□□□□□ -1
RBM39-239ENST00000494274 MAGEB6P1A0A0J9YX57 407 aa8.78□□□□□ -1
RBM39-239ENST00000494274 TRIM75PA6NK02 468 aa8.78□□□□□ -1
RBM39-239ENST00000494274 PDHXO00330 501 aa8.78□□□□□ -1
RBM39-239ENST00000494274 CXCL11O14625 94 aa8.78□□□□□ -1
RBM39-239ENST00000494274 TBC1D12O60347 775 aa8.78□□□□□ -1
RBM39-239ENST00000494274 HLA-DOAP06340 250 aa8.78□□□□□ -1
RBM39-239ENST00000494274 PDE6AP16499 860 aa8.78□□□□□ -1
RBM39-239ENST00000494274 ATP5JP18859 108 aa8.78□□□□□ -1
RBM39-239ENST00000494274 PKN2Q16513 984 aaKnown RBP8.78□□□□□ -1
RBM39-239ENST00000494274 NOM1Q5C9Z4 860 aaKnown RBP8.78□□□□□ -1
RBM39-239ENST00000494274 GADL1Q6ZQY3 521 aa8.78□□□□□ -1
RBM39-239ENST00000494274 FOXP4Q8IVH2 680 aaPredicted RBP8.78□□□□□ -1
RBM39-239ENST00000494274 CD99L2Q8TCZ2 262 aa8.78□□□□□ -1
RBM39-239ENST00000494274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.78□□□□□ -1
RBM39-239ENST00000494274 PAG1Q9NWQ8 432 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms