RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SNAP47Q5SQN1 464 aa3.88□□□□□ -1.79
LMNB1-207ENST00000494185 SPATA32Q96LK8 384 aa3.88□□□□□ -1.79
LMNB1-207ENST00000494185 WDR18Q9BV38 432 aa3.88□□□□□ -1.79
LMNB1-207ENST00000494185 SSBP4Q9BWG4 385 aaPredicted RBP3.88□□□□□ -1.79
LMNB1-207ENST00000494185 OSBPL1AQ9BXW6 950 aa3.88□□□□□ -1.79
LMNB1-207ENST00000494185 NRSN2Q9GZP1 204 aa3.88□□□□□ -1.79
LMNB1-207ENST00000494185 PCOLCE2Q9UKZ9 415 aa3.88□□□□□ -1.79
LMNB1-207ENST00000494185 SCO2A0A1W2PP80 73 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 FURINP09958 794 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 GBP2P32456 591 aaPredicted RBP3.87□□□□□ -1.79
LMNB1-207ENST00000494185 ETF1P62495 437 aaKnown RBP3.87□□□□□ -1.79
LMNB1-207ENST00000494185 FANCCQ00597 558 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 NFIAQ12857 509 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 MAP3K11Q16584 847 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 LDLRAD1Q5T700 205 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 RNF43Q68DV7 783 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 AGMOQ6ZNB7 445 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 TRIM42Q8IWZ5 723 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 SMYD4Q8IYR2 804 aaPredicted RBP3.87□□□□□ -1.79
LMNB1-207ENST00000494185 C2CD4AQ8NCU7 369 aaPredicted RBP3.87□□□□□ -1.79
LMNB1-207ENST00000494185 RNF214Q8ND24 703 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 ZNF507Q8TCN5 953 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 RNF34Q969K3 372 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 COX4I2Q96KJ9 171 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 TBC1D32Q96NH3 1257 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 RSRP1Q9BUV0 290 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 ZC3H12CQ9C0D7 883 aaKnown RBP3.87□□□□□ -1.79
LMNB1-207ENST00000494185 CCDC86Q9H6F5 360 aaKnown RBP3.87□□□□□ -1.79
LMNB1-207ENST00000494185 GGT7Q9UJ14 662 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 DAGLAQ9Y4D2 1042 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 SUPT16HQ9Y5B9 1047 aaKnown RBP3.87□□□□□ -1.79
LMNB1-207ENST00000494185 ROBO2Q9HCK4 1378 aa3.87□□□□□ -1.79
LMNB1-207ENST00000494185 TMPRSS2O15393 492 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 ADAM23O75077 832 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 ECEL1O95672 775 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 TCF3P15923 654 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 LIG1P18858 919 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 BMP6P22004 513 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 CYP7A1P22680 504 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 ZNF252P-AS1Q0IIN9 211 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 RSPO4Q2I0M5 234 aaPredicted RBP3.86□□□□□ -1.79
LMNB1-207ENST00000494185 CWF19L2Q2TBE0 894 aaKnown RBP3.86□□□□□ -1.79
LMNB1-207ENST00000494185 NKAPLQ5M9Q1 402 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 PDZD3Q86UT5 571 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.86□□□□□ -1.79
LMNB1-207ENST00000494185 STK35Q8TDR2 534 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 GPBAR1Q8TDU6 330 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 EZH1Q92800 747 aaPredicted RBP3.86□□□□□ -1.79
LMNB1-207ENST00000494185 UBL7Q96S82 380 aaPredicted RBP3.86□□□□□ -1.79
LMNB1-207ENST00000494185 C7orf69Q9H7B7 122 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 CRIM1Q9NZV1 1036 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 GTF2IRD1Q9UHL9 959 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 LEMD3Q9Y2U8 911 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 ACTL7BQ9Y614 415 aa3.86□□□□□ -1.79
LMNB1-207ENST00000494185 PRAMEF27A3QJZ7 478 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 DLGAP3O95886 979 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 CTSBP07858 339 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 YARSP54577 528 aaKnown RBP3.85□□□□□ -1.79
LMNB1-207ENST00000494185 RPL6Q02878 288 aaKnown RBP3.85□□□□□ -1.79
LMNB1-207ENST00000494185 LMNB2Q03252 620 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 GNL2Q13823 731 aaKnown RBP3.85□□□□□ -1.79
LMNB1-207ENST00000494185 SGO2Q562F6 1265 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 ZC3H12AQ5D1E8 599 aaKnown RBP3.85□□□□□ -1.79
LMNB1-207ENST00000494185 PRSS36Q5K4E3 855 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 ERMP1Q7Z2K6 904 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 ARMC10Q8N2F6 343 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 PHC3Q8NDX5 983 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 GRIN3AQ8TCU5 1115 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 FBLIM1Q8WUP2 373 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 TMEM74Q96NL1 305 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 FANCD2OSQ96PS1 177 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 ACSS3Q9H6R3 686 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 KBTBD4Q9NVX7 518 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 RNF112Q9ULX5 631 aa3.85□□□□□ -1.79
LMNB1-207ENST00000494185 ANGEL1Q9UNK9 670 aaKnown RBP3.85□□□□□ -1.79
LMNB1-207ENST00000494185 GNAT3A8MTJ3 354 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 MINDY4BA8MYZ0 360 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 F6X3S4 739 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 ZNF862O60290 1169 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 COBLO75128 1261 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 HCLS1P14317 486 aaPredicted RBP3.84□□□□□ -1.79
LMNB1-207ENST00000494185 DRD2P14416 443 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 HDLBPQ00341 1268 aaKnown RBP3.84□□□□□ -1.79
LMNB1-207ENST00000494185 MPP2Q14168 576 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 TTLL4Q14679 1199 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 WIPI1Q5MNZ9 446 aaPredicted RBP3.84□□□□□ -1.79
LMNB1-207ENST00000494185 RASIP1Q5U651 963 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 USP48Q86UV5 1035 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 HID1Q8IV36 788 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 STK11IPQ8N1F8 1099 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 MFSD2AQ8NA29 543 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 RHOVQ96L33 236 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 SEMA6CQ9H3T2 930 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 GSX1Q9H4S2 264 aaPredicted RBP3.84□□□□□ -1.79
LMNB1-207ENST00000494185 FAM105AQ9NUU6 356 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 PIM2Q9P1W9 311 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 ADAM30Q9UKF2 790 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 TLR6Q9Y2C9 796 aa3.84□□□□□ -1.79
LMNB1-207ENST00000494185 HMX2A2RU54 273 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 LRIG2O94898 1065 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms