RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 DCAF15Q66K64 600 aa12.07□□□□□ -0.48
MACF1-222ENST00000494012 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
MACF1-222ENST00000494012 MIGA1Q8NAN2 632 aa12.07□□□□□ -0.48
MACF1-222ENST00000494012 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
MACF1-222ENST00000494012 FAM198AQ9UFP1 575 aa12.07□□□□□ -0.48
MACF1-222ENST00000494012 ATRNL1Q5VV63 1379 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 PCNTO95613 3336 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 TCRBV5S4A2TA0A5A2 114 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 UNCXA6NJT0 531 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 IREB2P48200 963 aaKnown RBP12.06□□□□□ -0.48
MACF1-222ENST00000494012 ERICH6BQ5W0A0 696 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
MACF1-222ENST00000494012 EVI5LQ96CN4 794 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 FSD1Q9BTV5 496 aa12.06□□□□□ -0.48
MACF1-222ENST00000494012 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
MACF1-222ENST00000494012 ANGEL1Q9UNK9 670 aaKnown RBP12.06□□□□□ -0.48
MACF1-222ENST00000494012 LAMB1P07942 1786 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 RNF113AO15541 343 aaKnown RBP12.05□□□□□ -0.48
MACF1-222ENST00000494012 PRKG1Q13976 671 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 MAP3K11Q16584 847 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 RGMBQ6NW40 437 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 TICAM2Q86XR7 235 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 TNS4Q8IZW8 715 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 JMYQ8N9B5 988 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 CSRNP1Q96S65 589 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
MACF1-222ENST00000494012 CRNKL1Q9BZJ0 848 aaKnown RBP12.05□□□□□ -0.48
MACF1-222ENST00000494012 OSBPL5Q9H0X9 879 aaPredicted RBP12.05□□□□□ -0.48
MACF1-222ENST00000494012 DDX4Q9NQI0 724 aaKnown RBP12.05□□□□□ -0.48
MACF1-222ENST00000494012 FLT1P17948 1338 aa12.05□□□□□ -0.48
MACF1-222ENST00000494012 USP5P45974 858 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 ZNF157P51786 506 aaPredicted RBP12.04□□□□□ -0.48
MACF1-222ENST00000494012 DYNLL1P63167 89 aaKnown RBP12.04□□□□□ -0.48
MACF1-222ENST00000494012 ANKRD13AQ8IZ07 590 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 TGFBRAP1Q8WUH2 860 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 APPBP2Q92624 585 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 CCDC102AQ96A19 550 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 AIDAQ96BJ3 306 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 CAPNS2Q96L46 248 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 DHX36Q9H2U1 1008 aaKnown RBP12.04□□□□□ -0.48
MACF1-222ENST00000494012 SIPA1L1O43166 1804 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 DOCK1Q14185 1865 aa12.04□□□□□ -0.48
MACF1-222ENST00000494012 TRIM6-TRIM34B2RNG4 842 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 UBE2Q2LH0YL09 131 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 MBD4O95243 580 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 LDLRAD1Q5T700 205 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 MAPKAPK5Q8IW41 473 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 ZFPM1Q8IX07 1006 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 LCORLQ8N3X6 602 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 DDRGK1Q96HY6 314 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 ZNF341Q9BYN7 854 aa12.03□□□□□ -0.48
MACF1-222ENST00000494012 WDR33Q9C0J8 1336 aaKnown RBP12.03□□□□□ -0.48
MACF1-222ENST00000494012 ATAD5Q96QE3 1844 aa12.02□□□□□ -0.48
MACF1-222ENST00000494012 MYH8P13535 1937 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 BAZ2AQ9UIF9 1905 aaKnown RBP12.02□□□□□ -0.49
MACF1-222ENST00000494012 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
MACF1-222ENST00000494012 USP2O75604 605 aaPredicted RBP12.02□□□□□ -0.49
MACF1-222ENST00000494012 HLA-DOAP06340 250 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 VEGFBP49765 207 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 NOGQ13253 232 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 GRM1Q13255 1194 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 CYP4F22Q6NT55 531 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 SH3BP5LQ7L8J4 393 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.02□□□□□ -0.49
MACF1-222ENST00000494012 WRNIP1Q96S55 665 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 ARMT1Q9H993 441 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 FZD1Q9UP38 647 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 CSADQ9Y600 493 aa12.02□□□□□ -0.49
MACF1-222ENST00000494012 TBC1D12O60347 775 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 SLC10A3P09131 477 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 GNAT2P19087 354 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 PDE4AP27815 886 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 MAP2K2P36507 400 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 MAP3K9P80192 1104 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 MIGA2Q7L4E1 593 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 TTC6Q86TZ1 520 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 RASAL3Q86YV0 1011 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 AMOTL1Q8IY63 956 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 RILPL2Q969X0 211 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 TRIM34Q9BYJ4 488 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 PUS7LQ9H0K6 701 aaKnown RBP12.01□□□□□ -0.49
MACF1-222ENST00000494012 ATP8A2Q9NTI2 1148 aa12.01□□□□□ -0.49
MACF1-222ENST00000494012 HERC5Q9UII4 1024 aaKnown RBP12.01□□□□□ -0.49
MACF1-222ENST00000494012 CHGBP05060 677 aa12□□□□□ -0.49
MACF1-222ENST00000494012 ZBTB48P10074 688 aaPredicted RBP12□□□□□ -0.49
MACF1-222ENST00000494012 MAP3K10Q02779 954 aa12□□□□□ -0.49
MACF1-222ENST00000494012 VGLL4Q14135 290 aa12□□□□□ -0.49
MACF1-222ENST00000494012 SLFNL1Q499Z3 407 aa12□□□□□ -0.49
MACF1-222ENST00000494012 ZMYM1Q5SVZ6 1142 aa12□□□□□ -0.49
MACF1-222ENST00000494012 TTC22Q5TAA0 569 aa12□□□□□ -0.49
MACF1-222ENST00000494012 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
MACF1-222ENST00000494012 OSBP2Q969R2 916 aa12□□□□□ -0.49
MACF1-222ENST00000494012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12□□□□□ -0.49
MACF1-222ENST00000494012 MCM9Q9NXL9 1143 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms