RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 RNF20Q5VTR2 975 aa17.8■□□□□ 0.44
ACTB-213ENST00000493945 TTC6Q86TZ1 520 aa17.8■□□□□ 0.44
ACTB-213ENST00000493945 ZSCAN29Q8IWY8 852 aaPredicted RBP17.8■□□□□ 0.44
ACTB-213ENST00000493945 TGFBRAP1Q8WUH2 860 aa17.8■□□□□ 0.44
ACTB-213ENST00000493945 SEC62Q99442 399 aaKnown RBP17.8■□□□□ 0.44
ACTB-213ENST00000493945 ZNF287Q9HBT7 754 aa17.8■□□□□ 0.44
ACTB-213ENST00000493945 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
ACTB-213ENST00000493945 LAMB1P07942 1786 aa17.8■□□□□ 0.44
ACTB-213ENST00000493945 FAM151AQ8WW52 585 aa17.79■□□□□ 0.44
ACTB-213ENST00000493945 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
ACTB-213ENST00000493945 TCP10L2B9ZVM9 353 aa17.78■□□□□ 0.44
ACTB-213ENST00000493945 WDHD1O75717 1129 aaPredicted RBP17.78■□□□□ 0.44
ACTB-213ENST00000493945 POLR3DP05423 398 aaPredicted RBP17.78■□□□□ 0.44
ACTB-213ENST00000493945 HSPD1P10809 573 aaKnown RBP17.78■□□□□ 0.44
ACTB-213ENST00000493945 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
ACTB-213ENST00000493945 CCDC129Q6ZRS4 1044 aa17.78■□□□□ 0.44
ACTB-213ENST00000493945 CDC37L1Q7L3B6 337 aa17.78■□□□□ 0.44
ACTB-213ENST00000493945 ZNF589Q86UQ0 364 aaPredicted RBP17.78■□□□□ 0.44
ACTB-213ENST00000493945 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
ACTB-213ENST00000493945 NMRK2Q9NPI5 230 aa17.78■□□□□ 0.44
ACTB-213ENST00000493945 DCP1AQ9NPI6 582 aaPredicted RBP17.78■□□□□ 0.44
ACTB-213ENST00000493945 MCM9Q9NXL9 1143 aa17.78■□□□□ 0.44
ACTB-213ENST00000493945 BAZ2AQ9UIF9 1905 aaKnown RBP17.78■□□□□ 0.44
ACTB-213ENST00000493945 EGFRP00533 1210 aa17.77■□□□□ 0.44
ACTB-213ENST00000493945 NT5C2P49902 561 aa17.77■□□□□ 0.44
ACTB-213ENST00000493945 ALX1Q15699 326 aa17.77■□□□□ 0.44
ACTB-213ENST00000493945 SUPT20HL1Q3ZLR7 823 aa17.77■□□□□ 0.44
ACTB-213ENST00000493945 SLFNL1Q499Z3 407 aa17.77■□□□□ 0.44
ACTB-213ENST00000493945 KRT26Q7Z3Y9 468 aa17.77■□□□□ 0.44
ACTB-213ENST00000493945 IFNL3Q8IZI9 196 aa17.77■□□□□ 0.44
ACTB-213ENST00000493945 SDR42E1Q8WUS8 393 aa17.77■□□□□ 0.44
ACTB-213ENST00000493945 LAMA4Q16363 1823 aa17.77■□□□□ 0.43
ACTB-213ENST00000493945 DDX60LQ5H9U9 1706 aaKnown RBP17.76■□□□□ 0.43
ACTB-213ENST00000493945 CHGBP05060 677 aa17.76■□□□□ 0.43
ACTB-213ENST00000493945 TCP10Q12799 353 aa17.76■□□□□ 0.43
ACTB-213ENST00000493945 DCAF15Q66K64 600 aa17.76■□□□□ 0.43
ACTB-213ENST00000493945 CRACR2BQ8N4Y2 399 aaPredicted RBP17.76■□□□□ 0.43
ACTB-213ENST00000493945 DEFB129Q9H1M3 183 aa17.76■□□□□ 0.43
ACTB-213ENST00000493945 PGAP2Q9UHJ9 254 aa17.76■□□□□ 0.43
ACTB-213ENST00000493945 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
ACTB-213ENST00000493945 ATRNL1Q5VV63 1379 aa17.76■□□□□ 0.43
ACTB-213ENST00000493945 MYH8P13535 1937 aa17.75■□□□□ 0.43
ACTB-213ENST00000493945 GSG1L2A8MUP6 293 aa17.75■□□□□ 0.43
ACTB-213ENST00000493945 POTECB2RU33 542 aa17.75■□□□□ 0.43
ACTB-213ENST00000493945 PCP11498 1178 aaKnown RBP17.75■□□□□ 0.43
ACTB-213ENST00000493945 ZKSCAN1P17029 563 aaPredicted RBP17.75■□□□□ 0.43
ACTB-213ENST00000493945 HIRAP54198 1017 aaPredicted RBP17.75■□□□□ 0.43
ACTB-213ENST00000493945 CACNB3P54284 484 aa17.75■□□□□ 0.43
ACTB-213ENST00000493945 RASA3Q14644 834 aa17.75■□□□□ 0.43
ACTB-213ENST00000493945 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
ACTB-213ENST00000493945 CSRNP1Q96S65 589 aa17.75■□□□□ 0.43
ACTB-213ENST00000493945 RNF41Q9H4P4 317 aaPredicted RBP17.75■□□□□ 0.43
ACTB-213ENST00000493945 PI4KBQ9UBF8 816 aa17.75■□□□□ 0.43
ACTB-213ENST00000493945 POLR2AP24928 1970 aaKnown RBP17.75■□□□□ 0.43
ACTB-213ENST00000493945 ZNF213O14771 459 aa17.74■□□□□ 0.43
ACTB-213ENST00000493945 PRKAB2O43741 272 aa17.74■□□□□ 0.43
ACTB-213ENST00000493945 PDE4BQ07343 736 aa17.74■□□□□ 0.43
ACTB-213ENST00000493945 NFIAQ12857 509 aa17.74■□□□□ 0.43
ACTB-213ENST00000493945 C8orf34Q49A92 452 aa17.74■□□□□ 0.43
ACTB-213ENST00000493945 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
ACTB-213ENST00000493945 SMC1BQ8NDV3 1235 aa17.74■□□□□ 0.43
ACTB-213ENST00000493945 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
ACTB-213ENST00000493945 MAP4K1Q92918 833 aa17.73■□□□□ 0.43
ACTB-213ENST00000493945 EHD4Q9H223 541 aa17.73■□□□□ 0.43
ACTB-213ENST00000493945 FAM198AQ9UFP1 575 aa17.73■□□□□ 0.43
ACTB-213ENST00000493945 SWAP70Q9UH65 585 aa17.73■□□□□ 0.43
ACTB-213ENST00000493945 SERPINB13Q9UIV8 391 aa17.73■□□□□ 0.43
ACTB-213ENST00000493945 MINDY4BA8MYZ0 360 aa17.72■□□□□ 0.43
ACTB-213ENST00000493945 USP17L12C9JPN9 530 aa17.72■□□□□ 0.43
ACTB-213ENST00000493945 USP17L21D6R901 530 aa17.72■□□□□ 0.43
ACTB-213ENST00000493945 FGAP02671 866 aa17.72■□□□□ 0.43
ACTB-213ENST00000493945 TRDNQ13061 729 aa17.72■□□□□ 0.43
ACTB-213ENST00000493945 KRT32Q14532 448 aa17.72■□□□□ 0.43
ACTB-213ENST00000493945 VPS53Q5VIR6 699 aa17.72■□□□□ 0.43
ACTB-213ENST00000493945 FOXP4Q8IVH2 680 aaPredicted RBP17.72■□□□□ 0.43
ACTB-213ENST00000493945 LSG1Q9H089 658 aaKnown RBP17.72■□□□□ 0.43
ACTB-213ENST00000493945 DDX4Q9NQI0 724 aaKnown RBP17.72■□□□□ 0.43
ACTB-213ENST00000493945 SAP30BPQ9UHR5 308 aaKnown RBP17.72■□□□□ 0.43
ACTB-213ENST00000493945 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
ACTB-213ENST00000493945 CNTNAP1P78357 1384 aa17.71■□□□□ 0.43
ACTB-213ENST00000493945 ROBO3Q96MS0 1386 aa17.71■□□□□ 0.43
ACTB-213ENST00000493945 PPP1R12BO60237 982 aaPredicted RBP17.71■□□□□ 0.43
ACTB-213ENST00000493945 TOMM70O94826 608 aa17.71■□□□□ 0.43
ACTB-213ENST00000493945 PPARAQ07869 468 aa17.71■□□□□ 0.43
ACTB-213ENST00000493945 CTR9Q6PD62 1173 aa17.71■□□□□ 0.43
ACTB-213ENST00000493945 RBM46Q8TBY0 533 aaKnown RBP17.71■□□□□ 0.43
ACTB-213ENST00000493945 TMEM39BQ9GZU3 492 aa17.71■□□□□ 0.43
ACTB-213ENST00000493945 CNNM2Q9H8M5 875 aa17.71■□□□□ 0.43
ACTB-213ENST00000493945 EPB41L4AQ9HCS5 686 aaPredicted RBP17.71■□□□□ 0.43
ACTB-213ENST00000493945 MKRN1Q9UHC7 482 aaKnown RBP17.71■□□□□ 0.43
ACTB-213ENST00000493945 PALD1Q9ULE6 856 aa17.71■□□□□ 0.43
ACTB-213ENST00000493945 C12orf60Q5U649 245 aa17.7■□□□□ 0.42
ACTB-213ENST00000493945 ZNF784Q8NCA9 323 aaPredicted RBP17.7■□□□□ 0.42
ACTB-213ENST00000493945 ASTN2O75129 1339 aaPredicted RBP17.7■□□□□ 0.42
ACTB-213ENST00000493945 TRPM7Q96QT4 1865 aa17.69■□□□□ 0.42
ACTB-213ENST00000493945 TBC1D12O60347 775 aa17.69■□□□□ 0.42
ACTB-213ENST00000493945 PTH1RQ03431 593 aa17.69■□□□□ 0.42
ACTB-213ENST00000493945 PPP4R3BQ5MIZ7 849 aa17.69■□□□□ 0.42
ACTB-213ENST00000493945 MAP1SQ66K74 1059 aaPredicted RBP17.69■□□□□ 0.42
ACTB-213ENST00000493945 MFSD6Q6ZSS7 791 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms