RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 ADMP35318 185 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 ST13P50502 369 aaKnown RBP6.61□□□□□ -1.35
CD46-217ENST00000493796 MFAP1P55081 439 aaKnown RBP6.61□□□□□ -1.35
CD46-217ENST00000493796 TTLL4Q14679 1199 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 ZAR1Q86SH2 424 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 SHISA5Q8N114 240 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 GIMAP7Q8NHV1 300 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 GIPC2Q8TF65 315 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 GATA6Q92908 595 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 CRELD1Q96HD1 420 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 TBC1D32Q96NH3 1257 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 MRS2Q9HD23 443 aa6.61□□□□□ -1.35
CD46-217ENST00000493796 DYNC1LI2O43237 492 aaPredicted RBP6.6□□□□□ -1.35
CD46-217ENST00000493796 NEFMP07197 916 aa6.6□□□□□ -1.35
CD46-217ENST00000493796 HCLS1P14317 486 aaPredicted RBP6.6□□□□□ -1.35
CD46-217ENST00000493796 ITGAEP38570 1179 aa6.6□□□□□ -1.35
CD46-217ENST00000493796 LIG3P49916 1009 aa6.6□□□□□ -1.35
CD46-217ENST00000493796 RPS26P62854 115 aaKnown RBP6.6□□□□□ -1.35
CD46-217ENST00000493796 ZNF326Q5BKZ1 582 aaKnown RBP6.6□□□□□ -1.35
CD46-217ENST00000493796 SMYD4Q8IYR2 804 aaPredicted RBP6.6□□□□□ -1.35
CD46-217ENST00000493796 RNF214Q8ND24 703 aa6.6□□□□□ -1.35
CD46-217ENST00000493796 NOC4LQ9BVI4 516 aaKnown RBP6.6□□□□□ -1.35
CD46-217ENST00000493796 C1GALT1Q9NS00 363 aa6.6□□□□□ -1.35
CD46-217ENST00000493796 ATG3Q9NT62 314 aa6.6□□□□□ -1.35
CD46-217ENST00000493796 VTI1BQ9UEU0 232 aa6.6□□□□□ -1.35
CD46-217ENST00000493796 PCDHA4Q9UN74 947 aa6.6□□□□□ -1.35
CD46-217ENST00000493796 DCDC2CA8MYV0 355 aa6.59□□□□□ -1.35
CD46-217ENST00000493796 HYAL3O43820 417 aaPredicted RBP6.59□□□□□ -1.35
CD46-217ENST00000493796 RNGTTO60942 597 aaKnown RBP6.59□□□□□ -1.35
CD46-217ENST00000493796 PTPN11Q06124 597 aaPredicted RBP6.59□□□□□ -1.35
CD46-217ENST00000493796 CPSF6Q16630 551 aaKnown RBP eCLIP6.59□□□□□ -1.35
CD46-217ENST00000493796 AGMOQ6ZNB7 445 aa6.59□□□□□ -1.35
CD46-217ENST00000493796 GAL3ST3Q96A11 431 aa6.59□□□□□ -1.35
CD46-217ENST00000493796 OSBPL1AQ9BXW6 950 aa6.59□□□□□ -1.35
CD46-217ENST00000493796 LGR6Q9HBX8 967 aa6.59□□□□□ -1.35
CD46-217ENST00000493796 ZFP64Q9NPA5 681 aa6.59□□□□□ -1.35
CD46-217ENST00000493796 CSADQ9Y600 493 aa6.59□□□□□ -1.35
CD46-217ENST00000493796 COBLO75128 1261 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 RLBP1P12271 317 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 SSTR4P31391 388 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 GRIK1P39086 918 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 CD97P48960 835 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 RING1Q06587 406 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 TRIM26Q12899 539 aaPredicted RBP6.58□□□□□ -1.36
CD46-217ENST00000493796 MAP3K11Q16584 847 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 ISL2Q96A47 359 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 METTL22Q9BUU2 404 aaPredicted RBP6.58□□□□□ -1.36
CD46-217ENST00000493796 PIM2Q9P1W9 311 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
CD46-217ENST00000493796 FAM170BA6NMN3 283 aa6.57□□□□□ -1.36
CD46-217ENST00000493796 MED26O95402 600 aa6.57□□□□□ -1.36
CD46-217ENST00000493796 NTF4P34130 210 aa6.57□□□□□ -1.36
CD46-217ENST00000493796 INPP5AQ14642 412 aa6.57□□□□□ -1.36
CD46-217ENST00000493796 INTS5Q6P9B9 1019 aaKnown RBP6.57□□□□□ -1.36
CD46-217ENST00000493796 C12orf40Q86WS4 652 aa6.57□□□□□ -1.36
CD46-217ENST00000493796 LEMD3Q9Y2U8 911 aa6.57□□□□□ -1.36
CD46-217ENST00000493796 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
CD46-217ENST00000493796 KIAA1324LA8MWY0 1029 aaPredicted RBP6.56□□□□□ -1.36
CD46-217ENST00000493796 LMNB1P20700 586 aa6.56□□□□□ -1.36
CD46-217ENST00000493796 CYP27A1Q02318 531 aa6.56□□□□□ -1.36
CD46-217ENST00000493796 CDK5R2Q13319 367 aa6.56□□□□□ -1.36
CD46-217ENST00000493796 SEPT6Q14141 434 aa6.56□□□□□ -1.36
CD46-217ENST00000493796 MRPL58Q14197 206 aaKnown RBP6.56□□□□□ -1.36
CD46-217ENST00000493796 ZBTB37Q5TC79 503 aa6.56□□□□□ -1.36
CD46-217ENST00000493796 LRFN4Q6PJG9 635 aa6.56□□□□□ -1.36
CD46-217ENST00000493796 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.56□□□□□ -1.36
CD46-217ENST00000493796 ELMO3Q96BJ8 720 aa6.56□□□□□ -1.36
CD46-217ENST00000493796 PLPPR2Q96GM1 343 aa6.56□□□□□ -1.36
CD46-217ENST00000493796 SSU72Q9NP77 194 aaKnown RBP6.56□□□□□ -1.36
CD46-217ENST00000493796 FANCGO15287 622 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 FOSL1P15407 271 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 ZNF16P17020 682 aaPredicted RBP6.55□□□□□ -1.36
CD46-217ENST00000493796 TFE3P19532 575 aaPredicted RBP6.55□□□□□ -1.36
CD46-217ENST00000493796 HOXA10P31260 410 aaPredicted RBP6.55□□□□□ -1.36
CD46-217ENST00000493796 XP32Q5T750 250 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 DUSP27Q5VZP5 1158 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 OGFOD3Q6PK18 319 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 ZNF765Q7L2R6 523 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 CYFIP1Q7L576 1253 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 HDXQ7Z353 690 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
CD46-217ENST00000493796 PHC3Q8NDX5 983 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 PSMG3-AS1Q96PY0 264 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 PICK1Q9NRD5 415 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 PCMTD2Q9NV79 361 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 SNCAIPQ9Y6H5 919 aa6.55□□□□□ -1.36
CD46-217ENST00000493796 SPINK2P20155 84 aa6.54□□□□□ -1.36
CD46-217ENST00000493796 CDK8P49336 464 aa6.54□□□□□ -1.36
CD46-217ENST00000493796 WIPI1Q5MNZ9 446 aaPredicted RBP6.54□□□□□ -1.36
CD46-217ENST00000493796 UBE3DQ7Z6J8 389 aa6.54□□□□□ -1.36
CD46-217ENST00000493796 BCL11AQ9H165 835 aa6.54□□□□□ -1.36
CD46-217ENST00000493796 MIR1-1HGQ9H1L0 117 aa6.54□□□□□ -1.36
CD46-217ENST00000493796 NISCHQ9Y2I1 1504 aa6.54□□□□□ -1.36
CD46-217ENST00000493796 PRAMEF27A3QJZ7 478 aa6.53□□□□□ -1.36
CD46-217ENST00000493796 CYP26A1O43174 497 aa6.53□□□□□ -1.36
CD46-217ENST00000493796 FAM87AP0C7U9 286 aa6.53□□□□□ -1.36
CD46-217ENST00000493796 DTX1Q86Y01 620 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms