RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 MROH7-TTC4A0A0A0MT08 1334 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 AOX1Q06278 1338 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 TTC41PQ6P2S7 1318 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 GSTO1P78417 241 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 NUCB1Q02818 461 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 TTF1Q15361 905 aaPredicted RBP14.07□□□□□ -0.16
CTSA-209ENST00000493522 HHIPL2Q6UWX4 724 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 WNK4Q96J92 1243 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 ZDHHC15Q96MV8 337 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 HAUS7Q99871 368 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 R3HDMLQ9H3Y0 253 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 ANTXR1Q9H6X2 564 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
CTSA-209ENST00000493522 PAG1Q9NWQ8 432 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 TMOD2Q9NZR1 351 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.07□□□□□ -0.16
CTSA-209ENST00000493522 FZD1Q9UP38 647 aa14.07□□□□□ -0.16
CTSA-209ENST00000493522 SSC5DA1L4H1 1573 aa14.06□□□□□ -0.16
CTSA-209ENST00000493522 MYH8P13535 1937 aa14.06□□□□□ -0.16
CTSA-209ENST00000493522 ERC2O15083 957 aa14.06□□□□□ -0.16
CTSA-209ENST00000493522 IREB2P48200 963 aaKnown RBP14.06□□□□□ -0.16
CTSA-209ENST00000493522 SPDYE2Q495Y8 402 aa14.06□□□□□ -0.16
CTSA-209ENST00000493522 OTUD7BQ6GQQ9 843 aa14.06□□□□□ -0.16
CTSA-209ENST00000493522 NAA16Q6N069 864 aaPredicted RBP14.06□□□□□ -0.16
CTSA-209ENST00000493522 NSUN4Q96CB9 384 aaKnown RBP14.06□□□□□ -0.16
CTSA-209ENST00000493522 EDC3Q96F86 508 aaKnown RBP14.06□□□□□ -0.16
CTSA-209ENST00000493522 TDRD3Q9H7E2 651 aaKnown RBP14.06□□□□□ -0.16
CTSA-209ENST00000493522 ZNF70Q9UC06 446 aaPredicted RBP14.06□□□□□ -0.16
CTSA-209ENST00000493522 TRIM17Q9Y577 477 aa14.06□□□□□ -0.16
CTSA-209ENST00000493522 GAKO14976 1311 aa14.06□□□□□ -0.16
CTSA-209ENST00000493522 SALL3Q9BXA9 1300 aa14.06□□□□□ -0.16
CTSA-209ENST00000493522 GLRX3O76003 335 aaKnown RBP14.05□□□□□ -0.16
CTSA-209ENST00000493522 LDHCP07864 332 aa14.05□□□□□ -0.16
CTSA-209ENST00000493522 BTDP43251 543 aa14.05□□□□□ -0.16
CTSA-209ENST00000493522 MAP3K12Q12852 859 aa14.05□□□□□ -0.16
CTSA-209ENST00000493522 ZNF384Q8TF68 577 aa14.05□□□□□ -0.16
CTSA-209ENST00000493522 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
CTSA-209ENST00000493522 CLMNQ96JQ2 1002 aa14.05□□□□□ -0.16
CTSA-209ENST00000493522 NOL10Q9BSC4 688 aaKnown RBP14.05□□□□□ -0.16
CTSA-209ENST00000493522 MRIQ9BWK5 157 aa14.05□□□□□ -0.16
CTSA-209ENST00000493522 BAZ2AQ9UIF9 1905 aaKnown RBP14.05□□□□□ -0.16
CTSA-209ENST00000493522 DDX60LQ5H9U9 1706 aaKnown RBP14.04□□□□□ -0.16
CTSA-209ENST00000493522 LAMB1P07942 1786 aa14.04□□□□□ -0.16
CTSA-209ENST00000493522 IGF2BP3O00425 579 aaKnown RBP eCLIP14.04□□□□□ -0.16
CTSA-209ENST00000493522 CACNB3P54284 484 aa14.04□□□□□ -0.16
CTSA-209ENST00000493522 TNFAIP1Q13829 316 aa14.04□□□□□ -0.16
CTSA-209ENST00000493522 APOBEC3HQ6NTF7 200 aaKnown RBP14.04□□□□□ -0.16
CTSA-209ENST00000493522 OTOP1Q7RTM1 612 aa14.04□□□□□ -0.16
CTSA-209ENST00000493522 ANKRD13AQ8IZ07 590 aa14.04□□□□□ -0.16
CTSA-209ENST00000493522 MAGEB6Q8N7X4 407 aa14.04□□□□□ -0.16
CTSA-209ENST00000493522 PI4K2BQ8TCG2 481 aa14.04□□□□□ -0.16
CTSA-209ENST00000493522 ERO1AQ96HE7 468 aa14.04□□□□□ -0.16
CTSA-209ENST00000493522 TCP10L2B9ZVM9 353 aa14.03□□□□□ -0.16
CTSA-209ENST00000493522 MAP4K4O95819 1239 aaPredicted RBP14.03□□□□□ -0.16
CTSA-209ENST00000493522 CYP7A1P22680 504 aa14.03□□□□□ -0.16
CTSA-209ENST00000493522 TNNI2P48788 182 aa14.03□□□□□ -0.16
CTSA-209ENST00000493522 PDE1AP54750 535 aa14.03□□□□□ -0.16
CTSA-209ENST00000493522 RASA3Q14644 834 aa14.03□□□□□ -0.16
CTSA-209ENST00000493522 NBPF12Q5TAG4 269 aaPredicted RBP14.03□□□□□ -0.16
CTSA-209ENST00000493522 CENPQQ7L2Z9 268 aaPredicted RBP14.03□□□□□ -0.16
CTSA-209ENST00000493522 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.03□□□□□ -0.163e-6■■□□□ 12.8
CTSA-209ENST00000493522 ATAD5Q96QE3 1844 aa14.03□□□□□ -0.16
CTSA-209ENST00000493522 SIPA1L1O43166 1804 aa14.02□□□□□ -0.16
CTSA-209ENST00000493522 RFX7Q2KHR2 1363 aa14.02□□□□□ -0.17
CTSA-209ENST00000493522 IGSF3O75054 1194 aa14.02□□□□□ -0.17
CTSA-209ENST00000493522 PDE6AP16499 860 aa14.02□□□□□ -0.17
CTSA-209ENST00000493522 CDC42EP5Q6NZY7 148 aa14.02□□□□□ -0.17
CTSA-209ENST00000493522 ADGRA1Q86SQ6 560 aa14.02□□□□□ -0.17
CTSA-209ENST00000493522 USP40Q9NVE5 1235 aa14.02□□□□□ -0.17
CTSA-209ENST00000493522 AATFQ9NY61 560 aaKnown RBP eCLIP14.02□□□□□ -0.17
CTSA-209ENST00000493522 STAP2Q9UGK3 403 aa14.02□□□□□ -0.17
CTSA-209ENST00000493522 GPR75-ASB3A0A0A6YYF3 556 aa14.01□□□□□ -0.17
CTSA-209ENST00000493522 USP2O75604 605 aaPredicted RBP14.01□□□□□ -0.17
CTSA-209ENST00000493522 CRHR2Q13324 411 aa14.01□□□□□ -0.17
CTSA-209ENST00000493522 SLC9C2Q5TAH2 1124 aa14.01□□□□□ -0.17
CTSA-209ENST00000493522 FAM163AQ96GL9 167 aaPredicted RBP14.01□□□□□ -0.17
CTSA-209ENST00000493522 RPAP1Q9BWH6 1393 aaPredicted RBP14□□□□□ -0.17
CTSA-209ENST00000493522 ZNF532Q9HCE3 1301 aa14□□□□□ -0.17
CTSA-209ENST00000493522 BAG3O95817 575 aa14□□□□□ -0.17
CTSA-209ENST00000493522 PDE4AP27815 886 aa14□□□□□ -0.17
CTSA-209ENST00000493522 PICALMQ13492 652 aa14□□□□□ -0.17
CTSA-209ENST00000493522 PLEKHM2Q8IWE5 1019 aa14□□□□□ -0.17
CTSA-209ENST00000493522 KBTBD3Q8NAB2 608 aa14□□□□□ -0.17
CTSA-209ENST00000493522 MIGA1Q8NAN2 632 aa14□□□□□ -0.17
CTSA-209ENST00000493522 CD99L2Q8TCZ2 262 aa14□□□□□ -0.17
CTSA-209ENST00000493522 OPTNQ96CV9 577 aa14□□□□□ -0.17
CTSA-209ENST00000493522 FSD1Q9BTV5 496 aa14□□□□□ -0.17
CTSA-209ENST00000493522 EFCC1Q9HA90 598 aa14□□□□□ -0.17
CTSA-209ENST00000493522 PTPN22Q9Y2R2 807 aa14□□□□□ -0.17
CTSA-209ENST00000493522 DOCK1Q14185 1865 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 TESPA1A2RU30 521 aaPredicted RBP13.99□□□□□ -0.17
CTSA-209ENST00000493522 PLCG2P16885 1265 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 ADD2P35612 726 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 GJA5P36382 358 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 DYNLL1P63167 89 aaKnown RBP13.99□□□□□ -0.17
CTSA-209ENST00000493522 SP3Q02447 781 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 TCP10Q12799 353 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 NFIAQ12857 509 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 FKBP1CQ5VVH2 108 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms