RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TREHO43280 583 aa6.18□□□□□ -1.42
PTCD3-218ENST00000493430 NME2P22392 152 aa6.18□□□□□ -1.42
PTCD3-218ENST00000493430 ENOX2Q16206 610 aaKnown RBP6.18□□□□□ -1.42
PTCD3-218ENST00000493430 NETO1Q8TDF5 533 aa6.18□□□□□ -1.42
PTCD3-218ENST00000493430 SSU72Q9NP77 194 aaKnown RBP6.18□□□□□ -1.42
PTCD3-218ENST00000493430 ITGB5P18084 799 aa6.17□□□□□ -1.42
PTCD3-218ENST00000493430 PLCL1Q15111 1095 aa6.17□□□□□ -1.42
PTCD3-218ENST00000493430 ZC3H12AQ5D1E8 599 aaKnown RBP6.17□□□□□ -1.42
PTCD3-218ENST00000493430 MAP1SQ66K74 1059 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-218ENST00000493430 SPRED2Q7Z698 418 aa6.17□□□□□ -1.42
PTCD3-218ENST00000493430 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTCD3-218ENST00000493430 FAM181AQ8N9Y4 354 aa6.17□□□□□ -1.42
PTCD3-218ENST00000493430 STK35Q8TDR2 534 aa6.17□□□□□ -1.42
PTCD3-218ENST00000493430 ERVK-24P63145 666 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 ARHGAP27Q6ZUM4 889 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 PLD6Q8N2A8 252 aaKnown RBP6.16□□□□□ -1.42
PTCD3-218ENST00000493430 RNF214Q8ND24 703 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 GPBAR1Q8TDU6 330 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 ACSBG1Q96GR2 724 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 DUSP23Q9BVJ7 150 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 CEP44Q9C0F1 390 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 MKNK2Q9HBH9 465 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 CBX8Q9HC52 389 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 SAMM50Q9Y512 469 aa6.16□□□□□ -1.42
PTCD3-218ENST00000493430 LEFTY1O75610 366 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 NEFMP07197 916 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 GSTT1P30711 240 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 ZNF252P-AS1Q0IIN9 211 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 BNIP3Q12983 259 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 ZNF574Q6ZN55 896 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-218ENST00000493430 ZSCAN29Q8IWY8 852 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-218ENST00000493430 C3orf58Q8NDZ4 430 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 FBF1Q8TES7 1133 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 ISL2Q96A47 359 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 NECAB3Q96P71 396 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-218ENST00000493430 SRCIN1Q9C0H9 1055 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 VAV3Q9UKW4 847 aa6.15□□□□□ -1.42
PTCD3-218ENST00000493430 BIN1O00499 593 aa6.14□□□□□ -1.43
PTCD3-218ENST00000493430 PRKCQQ04759 706 aa6.14□□□□□ -1.43
PTCD3-218ENST00000493430 IFI16Q16666 785 aaKnown RBP6.14□□□□□ -1.43
PTCD3-218ENST00000493430 ZNF792Q3KQV3 632 aa6.14□□□□□ -1.43
PTCD3-218ENST00000493430 TPTE2Q6XPS3 522 aa6.14□□□□□ -1.43
PTCD3-218ENST00000493430 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
PTCD3-218ENST00000493430 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
PTCD3-218ENST00000493430 CACNA2D2Q9NY47 1150 aa6.14□□□□□ -1.43
PTCD3-218ENST00000493430 UNC13AQ9UPW8 1703 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 TMEM265A0A087WTH1 108 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 GIPC1O14908 333 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 FUT4P22083 530 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 MAPK8P45983 427 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 ALG1LQ6GMV1 187 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 OGFOD2Q6N063 350 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 WFDC3Q8IUB2 231 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 TOP6BLQ8N6T0 577 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 PICK1Q9NRD5 415 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 PPM1HQ9ULR3 514 aa6.13□□□□□ -1.43
PTCD3-218ENST00000493430 ENC1O14682 589 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 TRIM37O94972 964 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 CEACAM5P06731 702 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 CD8BP10966 210 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 BMP6P22004 513 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 OXCT1P55809 520 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 AOC3Q16853 763 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 MPRIPQ6WCQ1 1025 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 HRASLS5Q96KN8 279 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 OSBPL7Q9BZF2 842 aa6.12□□□□□ -1.43
PTCD3-218ENST00000493430 PAPLNO95428 1278 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 FMR1Q06787 632 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTCD3-218ENST00000493430 LRRC14Q15048 493 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 PPM1JQ5JR12 505 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 SCARA3Q6AZY7 606 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 POU5F2Q8N7G0 328 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 PI4K2BQ8TCG2 481 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 GRIN3AQ8TCU5 1115 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 GTF2IRD1Q9UHL9 959 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 CSADQ9Y600 493 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 U3KQE9 123 aa6.11□□□□□ -1.43
PTCD3-218ENST00000493430 DCDC2CA8MYV0 355 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 FANCGO15287 622 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 PAGE1O75459 146 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 ATP2B2Q01814 1243 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 LLGL2Q6P1M3 1020 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 CDC37L1Q7L3B6 337 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 ATG4DQ86TL0 474 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-218ENST00000493430 C12orf40Q86WS4 652 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 ANKRD24Q8TF21 1146 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 HEXIM2Q96MH2 286 aaKnown RBP6.1□□□□□ -1.43
PTCD3-218ENST00000493430 ASB16Q96NS5 453 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 CYP8B1Q9UNU6 501 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 PLAGL2Q9UPG8 496 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 SPG7Q9UQ90 795 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 SNX11Q9Y5W9 270 aa6.1□□□□□ -1.43
PTCD3-218ENST00000493430 IGF2BP3O00425 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTCD3-218ENST00000493430 FBXO24O75426 580 aa6.09□□□□□ -1.43
PTCD3-218ENST00000493430 RNASE1P07998 156 aaKnown RBP6.09□□□□□ -1.43
PTCD3-218ENST00000493430 ITIH2P19823 946 aa6.09□□□□□ -1.43
PTCD3-218ENST00000493430 CD96P40200 585 aa6.09□□□□□ -1.43
PTCD3-218ENST00000493430 RING1Q06587 406 aa6.09□□□□□ -1.43
PTCD3-218ENST00000493430 FZD5Q13467 585 aa6.09□□□□□ -1.43
PTCD3-218ENST00000493430 KCT2Q8NC54 265 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms