RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 PCDH1Q08174 1060 aa7.06□□□□□ -1.28
SYCP1-208ENST00000493377 ARXQ96QS3 562 aa7.06□□□□□ -1.28
SYCP1-208ENST00000493377 CHRDQ9H2X0 955 aa7.06□□□□□ -1.28
SYCP1-208ENST00000493377 NKPD1Q17RQ9 610 aa7.05□□□□□ -1.28
SYCP1-208ENST00000493377 NPAS4Q8IUM7 802 aa7.05□□□□□ -1.28
SYCP1-208ENST00000493377 TOP6BLQ8N6T0 577 aa7.05□□□□□ -1.28
SYCP1-208ENST00000493377 DDX54Q8TDD1 881 aaKnown RBP7.05□□□□□ -1.28
SYCP1-208ENST00000493377 NUDT16Q96DE0 195 aaKnown RBP7.05□□□□□ -1.28
SYCP1-208ENST00000493377 TEPSINQ96N21 525 aa7.05□□□□□ -1.28
SYCP1-208ENST00000493377 GPR20Q99678 358 aa7.05□□□□□ -1.28
SYCP1-208ENST00000493377 ECEL1O95672 775 aa7.04□□□□□ -1.28
SYCP1-208ENST00000493377 ABTB2Q8N961 1025 aa7.04□□□□□ -1.28
SYCP1-208ENST00000493377 FANCD2OSQ96PS1 177 aa7.04□□□□□ -1.28
SYCP1-208ENST00000493377 TRIM56Q9BRZ2 755 aaKnown RBP7.04□□□□□ -1.28
SYCP1-208ENST00000493377 CLEC4MQ9H2X3 399 aaPredicted RBP7.04□□□□□ -1.28
SYCP1-208ENST00000493377 PCOLCE2Q9UKZ9 415 aa7.04□□□□□ -1.28
SYCP1-208ENST00000493377 KCTD3Q9Y597 815 aa7.04□□□□□ -1.28
SYCP1-208ENST00000493377 PDE3AQ14432 1141 aa7.03□□□□□ -1.28
SYCP1-208ENST00000493377 ZNF423Q2M1K9 1284 aa7.03□□□□□ -1.28
SYCP1-208ENST00000493377 KANK4Q5T7N3 995 aaPredicted RBP7.03□□□□□ -1.28
SYCP1-208ENST00000493377 FAM214BQ7L5A3 538 aa7.03□□□□□ -1.28
SYCP1-208ENST00000493377 TFIP11Q9UBB9 837 aaKnown RBP7.03□□□□□ -1.28
SYCP1-208ENST00000493377 ADAMTS20P59510 1910 aa7.02□□□□□ -1.29
SYCP1-208ENST00000493377 MCOLN1Q9GZU1 580 aa7.02□□□□□ -1.29
SYCP1-208ENST00000493377 PEX10O60683 326 aa7.01□□□□□ -1.29
SYCP1-208ENST00000493377 SORCS2Q96PQ0 1159 aa7.01□□□□□ -1.29
SYCP1-208ENST00000493377 MENTQ9BUN1 341 aa7.01□□□□□ -1.29
SYCP1-208ENST00000493377 STIM2Q9P246 746 aa7.01□□□□□ -1.29
SYCP1-208ENST00000493377 TNFRSF1AP19438 455 aa7□□□□□ -1.29
SYCP1-208ENST00000493377 ID3Q02535 119 aa7□□□□□ -1.29
SYCP1-208ENST00000493377 PLP2Q04941 152 aa7□□□□□ -1.29
SYCP1-208ENST00000493377 ALPK1Q96QP1 1244 aa7□□□□□ -1.29
SYCP1-208ENST00000493377 GNAT3A8MTJ3 354 aa6.99□□□□□ -1.29
SYCP1-208ENST00000493377 ZBTB39O15060 712 aa6.99□□□□□ -1.29
SYCP1-208ENST00000493377 SLC16A11Q8NCK7 471 aa6.99□□□□□ -1.29
SYCP1-208ENST00000493377 FEZF2Q8TBJ5 459 aa6.99□□□□□ -1.29
SYCP1-208ENST00000493377 DISC1Q9NRI5 854 aa6.99□□□□□ -1.29
SYCP1-208ENST00000493377 PALD1Q9ULE6 856 aa6.99□□□□□ -1.29
SYCP1-208ENST00000493377 RNGTTO60942 597 aaKnown RBP6.98□□□□□ -1.29
SYCP1-208ENST00000493377 SLFN14P0C7P3 912 aa6.98□□□□□ -1.29
SYCP1-208ENST00000493377 TTLL4Q14679 1199 aa6.98□□□□□ -1.29
SYCP1-208ENST00000493377 SP8Q8IXZ3 490 aa6.98□□□□□ -1.29
SYCP1-208ENST00000493377 MYLIPQ8WY64 445 aa6.98□□□□□ -1.29
SYCP1-208ENST00000493377 ZC3H12DA2A288 527 aaKnown RBP6.97□□□□□ -1.29
SYCP1-208ENST00000493377 METTL12A8MUP2 240 aa6.97□□□□□ -1.29
SYCP1-208ENST00000493377 HMGA2P52926 109 aa6.97□□□□□ -1.29
SYCP1-208ENST00000493377 HHIPL2Q6UWX4 724 aa6.97□□□□□ -1.29
SYCP1-208ENST00000493377 IRF2BP1Q8IU81 584 aa6.97□□□□□ -1.29
SYCP1-208ENST00000493377 ATP13A1Q9HD20 1204 aa6.97□□□□□ -1.29
SYCP1-208ENST00000493377 CNOT11Q9UKZ1 510 aaKnown RBP6.97□□□□□ -1.29
SYCP1-208ENST00000493377 A0A096LPE4 126 aa6.96□□□□□ -1.3
SYCP1-208ENST00000493377 A0A1W2PPZ6 126 aa6.96□□□□□ -1.3
SYCP1-208ENST00000493377 EREGO14944 169 aa6.96□□□□□ -1.3
SYCP1-208ENST00000493377 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 MYOCOSA0A1B0GUC4 107 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 GRIN3BO60391 1043 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 B3GALT4O96024 378 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 HCLS1P14317 486 aaPredicted RBP6.95□□□□□ -1.3
SYCP1-208ENST00000493377 PCSK2P16519 638 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 AP3B2Q13367 1082 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 TTC6Q86TZ1 520 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 FAM200AQ8TCP9 573 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 BDH2Q9BUT1 245 aa6.95□□□□□ -1.3
SYCP1-208ENST00000493377 HNRNPUQ00839 825 aaKnown RBP eCLIP6.94□□□□□ -1.3
SYCP1-208ENST00000493377 PEAR1Q5VY43 1037 aaPredicted RBP6.94□□□□□ -1.3
SYCP1-208ENST00000493377 ZDHHC14Q8IZN3 488 aa6.94□□□□□ -1.3
SYCP1-208ENST00000493377 VRTNQ9H8Y1 702 aa6.94□□□□□ -1.3
SYCP1-208ENST00000493377 GCM1Q9NP62 436 aa6.94□□□□□ -1.3
SYCP1-208ENST00000493377 FRMD5Q7Z6J6 570 aa6.93□□□□□ -1.3
SYCP1-208ENST00000493377 TTC16Q8NEE8 873 aa6.93□□□□□ -1.3
SYCP1-208ENST00000493377 PRIMPOLQ96LW4 560 aa6.93□□□□□ -1.3
SYCP1-208ENST00000493377 FOXQ1Q9C009 403 aa6.93□□□□□ -1.3
SYCP1-208ENST00000493377 FSHBP01225 129 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 HPXP02790 462 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 LIG1P18858 919 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 SSPNQ14714 243 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 TMEM132EQ6IEE7 984 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.92□□□□□ -1.3
SYCP1-208ENST00000493377 SLC6A17Q9H1V8 727 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 ADAM7Q9H2U9 754 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 SLAMF8Q9P0V8 285 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 PCDHGC5Q9Y5F6 944 aa6.92□□□□□ -1.3
SYCP1-208ENST00000493377 SLC22A31A6NKX4 558 aa6.91□□□□□ -1.3
SYCP1-208ENST00000493377 AFF3P51826 1226 aaKnown RBP6.91□□□□□ -1.3
SYCP1-208ENST00000493377 ZNF605Q86T29 641 aa6.91□□□□□ -1.3
SYCP1-208ENST00000493377 ISL2Q96A47 359 aa6.91□□□□□ -1.3
SYCP1-208ENST00000493377 WDR89Q96FK6 387 aaPredicted RBP6.91□□□□□ -1.3
SYCP1-208ENST00000493377 HSPA12BQ96MM6 686 aa6.91□□□□□ -1.3
SYCP1-208ENST00000493377 SLITRK6Q9H5Y7 841 aa6.91□□□□□ -1.3
SYCP1-208ENST00000493377 SSU72Q9NP77 194 aaKnown RBP6.91□□□□□ -1.3
SYCP1-208ENST00000493377 PRDM10Q9NQV6 1147 aa6.91□□□□□ -1.3
SYCP1-208ENST00000493377 RAD21O60216 631 aa6.9□□□□□ -1.3
SYCP1-208ENST00000493377 PHACTR2O75167 634 aa6.9□□□□□ -1.3
SYCP1-208ENST00000493377 OCLNQ16625 522 aa6.9□□□□□ -1.3
SYCP1-208ENST00000493377 SWI5Q1ZZU3 235 aa6.9□□□□□ -1.3
SYCP1-208ENST00000493377 KIF4BQ2VIQ3 1234 aa6.9□□□□□ -1.3
SYCP1-208ENST00000493377 DACT3Q96B18 629 aaPredicted RBP6.9□□□□□ -1.3
SYCP1-208ENST00000493377 POM121Q96HA1 1249 aa6.9□□□□□ -1.3
SYCP1-208ENST00000493377 GGNBP2Q9H3C7 697 aa6.9□□□□□ -1.3
SYCP1-208ENST00000493377 LATS2Q9NRM7 1088 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms