RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 PDLIM7Q9NR12 457 aa6.99□□□□□ -1.29
SEC13-219ENST00000492602 SLC45A1Q9Y2W3 748 aa6.99□□□□□ -1.29
SEC13-219ENST00000492602 ZHX2Q9Y6X8 837 aa6.99□□□□□ -1.29
SEC13-219ENST00000492602 MAST2Q6P0Q8 1798 aa6.99□□□□□ -1.29
SEC13-219ENST00000492602 MYO9BQ13459 2157 aa6.99□□□□□ -1.29
SEC13-219ENST00000492602 ARAP2Q8WZ64 1704 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 ZDBF2Q9HCK1 2354 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 GRXCR1A8MXD5 290 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 ERC2O15083 957 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 TLL1O43897 1013 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 NEFMP07197 916 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 ZKSCAN1P17029 563 aaPredicted RBP6.98□□□□□ -1.29
SEC13-219ENST00000492602 TRIM60Q495X7 471 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 MFSD14BQ5SR56 506 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 SLC39A5Q6ZMH5 540 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 FAM83AQ86UY5 434 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 TTLL11Q8NHH1 800 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 MPHOSPH8Q99549 860 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 MYD88Q99836 296 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 TMOD2Q9NZR1 351 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 USP34Q70CQ2 3546 aa6.98□□□□□ -1.29
SEC13-219ENST00000492602 DNM1LO00429 736 aa6.97□□□□□ -1.29
SEC13-219ENST00000492602 TAF5LO75529 589 aa6.97□□□□□ -1.29
SEC13-219ENST00000492602 ITGB8P26012 769 aa6.97□□□□□ -1.29
SEC13-219ENST00000492602 CHRNDQ07001 517 aa6.97□□□□□ -1.29
SEC13-219ENST00000492602 NOL9Q5SY16 702 aaKnown RBP6.97□□□□□ -1.29
SEC13-219ENST00000492602 CCDC191Q8NCU4 936 aa6.97□□□□□ -1.29
SEC13-219ENST00000492602 NUDT12Q9BQG2 462 aa6.97□□□□□ -1.29
SEC13-219ENST00000492602 CWC25Q9NXE8 425 aaPredicted RBP6.97□□□□□ -1.29
SEC13-219ENST00000492602 ZNF112Q9UJU3 913 aa6.97□□□□□ -1.29
SEC13-219ENST00000492602 PNMA3Q9UL41 463 aa6.97□□□□□ -1.29
SEC13-219ENST00000492602 RPAP1Q9BWH6 1393 aaPredicted RBP6.96□□□□□ -1.29
SEC13-219ENST00000492602 WDFY4Q6ZS81 3184 aa6.96□□□□□ -1.29
SEC13-219ENST00000492602 TRIM75PA6NK02 468 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 KRT37O76014 449 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 XRCC5P13010 732 aaKnown RBP6.96□□□□□ -1.3
SEC13-219ENST00000492602 RAG1P15918 1043 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 CNGA1P29973 690 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 GCLCP48506 637 aaPredicted RBP6.96□□□□□ -1.3
SEC13-219ENST00000492602 FPGSQ05932 587 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 TRIM26Q12899 539 aaPredicted RBP6.96□□□□□ -1.3
SEC13-219ENST00000492602 CCL14Q16627 93 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 KRT24Q2M2I5 525 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 GJC2Q5T442 439 aaPredicted RBP6.96□□□□□ -1.3
SEC13-219ENST00000492602 HDGFL1Q5TGJ6 251 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 TRMT44Q8IYL2 757 aaKnown RBP6.96□□□□□ -1.3
SEC13-219ENST00000492602 SOCS4Q8WXH5 440 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 HERVK_113Q902F9 699 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 LPAR1Q92633 364 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 CD320Q9NPF0 282 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 PICK1Q9NRD5 415 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 DBF4Q9UBU7 674 aaPredicted RBP6.96□□□□□ -1.3
SEC13-219ENST00000492602 DDX20Q9UHI6 824 aaKnown RBP6.96□□□□□ -1.3
SEC13-219ENST00000492602 AGTPBP1Q9UPW5 1226 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 AFG3L2Q9Y4W6 797 aa6.96□□□□□ -1.3
SEC13-219ENST00000492602 SPEF2Q9C093 1822 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 MYCNP04198 464 aaPredicted RBP6.95□□□□□ -1.3
SEC13-219ENST00000492602 PTPRAP18433 802 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 GOLGA2Q08379 1002 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 TREML2Q5T2D2 321 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 C15orf52Q6ZUT6 534 aaKnown RBP6.95□□□□□ -1.3
SEC13-219ENST00000492602 SLC28A3Q9HAS3 691 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 HYPKQ9NX55 129 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 MSRAQ9UJ68 235 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 COG5Q9UP83 839 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 DAGLAQ9Y4D2 1042 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 TACC3Q9Y6A5 838 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 CFAP54Q96N23 3096 aa6.95□□□□□ -1.3
SEC13-219ENST00000492602 CACNA1BQ00975 2339 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 KBTBD13C9JR72 458 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 PER1O15534 1290 aaPredicted RBP6.94□□□□□ -1.3
SEC13-219ENST00000492602 MSCO60682 206 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 CLTBP09497 229 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 HSPA5P11021 654 aaKnown RBP6.94□□□□□ -1.3
SEC13-219ENST00000492602 ALADP13716 330 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 ITGA6P23229 1130 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 RGS2P41220 211 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 TLE2Q04725 743 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 TCP10Q12799 353 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 SNX17Q15036 470 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 GRIK5Q16478 980 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 FKBP1CQ5VVH2 108 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 SCYL3Q8IZE3 742 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 FAM151AQ8WW52 585 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 ANKS1AQ92625 1134 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 TEKT1Q969V4 418 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 FERMT2Q96AC1 680 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.94□□□□□ -1.32e-7■□□□□ 9
SEC13-219ENST00000492602 NKX2-4Q9H2Z4 354 aa6.94□□□□□ -1.3
SEC13-219ENST00000492602 GFRA3O60609 400 aa6.93□□□□□ -1.3
SEC13-219ENST00000492602 RAB30Q15771 203 aa6.93□□□□□ -1.3
SEC13-219ENST00000492602 MFSD14CQ5VZR4 134 aa6.93□□□□□ -1.3
SEC13-219ENST00000492602 ERMP1Q7Z2K6 904 aa6.93□□□□□ -1.3
SEC13-219ENST00000492602 CCAR1Q8IX12 1150 aaKnown RBP6.93□□□□□ -1.3
SEC13-219ENST00000492602 GJD3Q8N144 294 aa6.93□□□□□ -1.3
SEC13-219ENST00000492602 ARRDC4Q8NCT1 418 aa6.93□□□□□ -1.3
SEC13-219ENST00000492602 HLA-CQ95604 372 aa6.93□□□□□ -1.3
SEC13-219ENST00000492602 MYBBP1AQ9BQG0 1328 aaKnown RBP6.93□□□□□ -1.3
SEC13-219ENST00000492602 AK9Q5TCS8 1911 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms