RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 AFG3L2Q9Y4W6 797 aa16.58■□□□□ 0.24
USF1-206ENST00000491629 ADCY3O60266 1144 aa16.57■□□□□ 0.24
USF1-206ENST00000491629 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
USF1-206ENST00000491629 SLC5A1P13866 664 aa16.57■□□□□ 0.24
USF1-206ENST00000491629 FCGRTP55899 365 aa16.57■□□□□ 0.24
USF1-206ENST00000491629 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
USF1-206ENST00000491629 SLAIN1Q8ND83 568 aa16.57■□□□□ 0.24
USF1-206ENST00000491629 HTATIP2Q9BUP3 242 aa16.57■□□□□ 0.24
USF1-206ENST00000491629 BIN2Q9UBW5 565 aaPredicted RBP16.57■□□□□ 0.24
USF1-206ENST00000491629 ZHX2Q9Y6X8 837 aa16.57■□□□□ 0.24
USF1-206ENST00000491629 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
USF1-206ENST00000491629 DDTLA6NHG4 134 aaPredicted RBP16.56■□□□□ 0.24
USF1-206ENST00000491629 FLT3LGP49771 235 aa16.56■□□□□ 0.24
USF1-206ENST00000491629 RGS3P49796 1198 aa16.56■□□□□ 0.24
USF1-206ENST00000491629 UBXN2AP68543 259 aa16.56■□□□□ 0.24
USF1-206ENST00000491629 SCYL3Q8IZE3 742 aa16.56■□□□□ 0.24
USF1-206ENST00000491629 SSH1Q8WYL5 1049 aa16.56■□□□□ 0.24
USF1-206ENST00000491629 DDX4Q9NQI0 724 aaKnown RBP16.56■□□□□ 0.24
USF1-206ENST00000491629 CDK5RAP2Q96SN8 1893 aa16.55■□□□□ 0.24
USF1-206ENST00000491629 PTPRCP08575 1304 aa16.55■□□□□ 0.24
USF1-206ENST00000491629 SIPA1L1O43166 1804 aa16.55■□□□□ 0.24
USF1-206ENST00000491629 INHAP05111 366 aa16.55■□□□□ 0.24
USF1-206ENST00000491629 LDHBP07195 334 aaKnown RBP16.55■□□□□ 0.24
USF1-206ENST00000491629 PHKA1P46020 1223 aa16.55■□□□□ 0.24
USF1-206ENST00000491629 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
USF1-206ENST00000491629 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
USF1-206ENST00000491629 UNC80Q8N2C7 3258 aa16.55■□□□□ 0.24
USF1-206ENST00000491629 DDX60LQ5H9U9 1706 aaKnown RBP16.54■□□□□ 0.24
USF1-206ENST00000491629 GAKO14976 1311 aa16.54■□□□□ 0.24
USF1-206ENST00000491629 LRCH3Q96II8 777 aa16.54■□□□□ 0.24
USF1-206ENST00000491629 SIL1Q9H173 461 aa16.54■□□□□ 0.24
USF1-206ENST00000491629 PAK6Q9NQU5 681 aaPredicted RBP16.54■□□□□ 0.24
USF1-206ENST00000491629 LAMA2P24043 3122 aaKnown RBP16.54■□□□□ 0.24
USF1-206ENST00000491629 ADORA1P30542 326 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 GADL1Q6ZQY3 521 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 FASTKD5Q7L8L6 764 aaKnown RBP16.53■□□□□ 0.24
USF1-206ENST00000491629 FAM9BQ8IZU0 186 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 PXYLP1Q8TE99 480 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
USF1-206ENST00000491629 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 DEFB118Q96PH6 123 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 CRISPLD2Q9H0B8 497 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 SLC45A1Q9Y2W3 748 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 NR2E3Q9Y5X4 410 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 DNAH12Q6ZR08 3092 aa16.53■□□□□ 0.24
USF1-206ENST00000491629 MYO5AQ9Y4I1 1855 aaKnown RBP16.52■□□□□ 0.24
USF1-206ENST00000491629 ENTPD3O75355 529 aa16.52■□□□□ 0.24
USF1-206ENST00000491629 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
USF1-206ENST00000491629 IRF5Q13568 498 aa16.52■□□□□ 0.24
USF1-206ENST00000491629 TREML2Q5T2D2 321 aa16.52■□□□□ 0.24
USF1-206ENST00000491629 STAP2Q9UGK3 403 aa16.52■□□□□ 0.24
USF1-206ENST00000491629 PA2G4Q9UQ80 394 aaKnown RBP16.52■□□□□ 0.24
USF1-206ENST00000491629 TRIM75PA6NK02 468 aa16.51■□□□□ 0.23
USF1-206ENST00000491629 TNPO2O14787 897 aaKnown RBP16.51■□□□□ 0.23
USF1-206ENST00000491629 ZBTB22O15209 634 aa16.51■□□□□ 0.23
USF1-206ENST00000491629 CIAO1O76071 339 aa16.51■□□□□ 0.23
USF1-206ENST00000491629 PAWRQ96IZ0 340 aaKnown RBP16.51■□□□□ 0.23
USF1-206ENST00000491629 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
USF1-206ENST00000491629 DENND2AQ9ULE3 1009 aa16.51■□□□□ 0.23
USF1-206ENST00000491629 EVI5O60447 810 aa16.5■□□□□ 0.23
USF1-206ENST00000491629 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
USF1-206ENST00000491629 TFRCP02786 760 aaKnown RBP16.5■□□□□ 0.23
USF1-206ENST00000491629 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
USF1-206ENST00000491629 CCDC102BQ68D86 513 aa16.5■□□□□ 0.23
USF1-206ENST00000491629 ANKRD13CQ8N6S4 541 aa16.5■□□□□ 0.23
USF1-206ENST00000491629 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
USF1-206ENST00000491629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
USF1-206ENST00000491629 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 A0A1W2PPC1 479 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 DLL1O00548 723 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 SEMA3EO15041 775 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 RHBDL3P58872 404 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 TRIM32Q13049 653 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
USF1-206ENST00000491629 FAM163AQ96GL9 167 aaPredicted RBP16.49■□□□□ 0.23
USF1-206ENST00000491629 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 AGTPBP1Q9UPW5 1226 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
USF1-206ENST00000491629 FRMPD3Q5JV73 1810 aa16.49■□□□□ 0.23
USF1-206ENST00000491629 PICALMQ13492 652 aa16.48■□□□□ 0.23
USF1-206ENST00000491629 ZSCAN29Q8IWY8 852 aaPredicted RBP16.48■□□□□ 0.23
USF1-206ENST00000491629 SLC17A8Q8NDX2 589 aa16.48■□□□□ 0.23
USF1-206ENST00000491629 SMCR8Q8TEV9 937 aaPredicted RBP16.48■□□□□ 0.23
USF1-206ENST00000491629 GDF15Q99988 308 aa16.48■□□□□ 0.23
USF1-206ENST00000491629 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
USF1-206ENST00000491629 GJD2Q9UKL4 321 aa16.48■□□□□ 0.23
USF1-206ENST00000491629 ANP32CO43423 234 aa16.47■□□□□ 0.23
USF1-206ENST00000491629 BTDP43251 543 aa16.47■□□□□ 0.23
USF1-206ENST00000491629 TIMM10P62072 90 aa16.47■□□□□ 0.23
USF1-206ENST00000491629 FAM110CQ1W6H9 321 aa16.47■□□□□ 0.23
USF1-206ENST00000491629 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.47■□□□□ 0.23
USF1-206ENST00000491629 MROH7-TTC4A0A0A0MT08 1334 aa16.46■□□□□ 0.23
USF1-206ENST00000491629 IL15P40933 162 aaPredicted RBP16.46■□□□□ 0.23
USF1-206ENST00000491629 COPRSQ9NQ92 184 aa16.46■□□□□ 0.23
USF1-206ENST00000491629 ABCF2Q9UG63 623 aa16.46■□□□□ 0.23
USF1-206ENST00000491629 TAOK2Q9UL54 1235 aa16.46■□□□□ 0.23
USF1-206ENST00000491629 PDS5AQ29RF7 1337 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms