RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 USP5P45974 858 aa9.97□□□□□ -0.81
RNF38-209ENST00000491349 MKRN3Q13064 507 aaKnown RBP9.97□□□□□ -0.81
RNF38-209ENST00000491349 CDC37L1Q7L3B6 337 aa9.97□□□□□ -0.81
RNF38-209ENST00000491349 ZNF784Q8NCA9 323 aaPredicted RBP9.97□□□□□ -0.81
RNF38-209ENST00000491349 TRIM34Q9BYJ4 488 aa9.97□□□□□ -0.81
RNF38-209ENST00000491349 ANTXR1Q9H6X2 564 aa9.97□□□□□ -0.81
RNF38-209ENST00000491349 USP40Q9NVE5 1235 aa9.97□□□□□ -0.81
RNF38-209ENST00000491349 PPP2R3BQ9Y5P8 575 aa9.97□□□□□ -0.81
RNF38-209ENST00000491349 NDUFB9Q9Y6M9 179 aa9.97□□□□□ -0.81
RNF38-209ENST00000491349 ZNF532Q9HCE3 1301 aa9.97□□□□□ -0.81
RNF38-209ENST00000491349 GPR75-ASB3A0A0A6YYF3 556 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 PDE4AP27815 886 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 ADD2P35612 726 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 BMP2KLQ5H9B9 411 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 ANGEL2Q5VTE6 544 aaKnown RBP9.96□□□□□ -0.82
RNF38-209ENST00000491349 ZSCAN29Q8IWY8 852 aaPredicted RBP9.96□□□□□ -0.82
RNF38-209ENST00000491349 TEX11Q8IYF3 940 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 APPBP2Q92624 585 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 NACAP1Q9BZK3 213 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 HELLSQ9NRZ9 838 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 AATFQ9NY61 560 aaKnown RBP eCLIP9.96□□□□□ -0.82
RNF38-209ENST00000491349 GGA3Q9NZ52 723 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 DAGLAQ9Y4D2 1042 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 GAKO14976 1311 aa9.96□□□□□ -0.82
RNF38-209ENST00000491349 FSTL1Q12841 308 aa9.95□□□□□ -0.82
RNF38-209ENST00000491349 NBPF9Q3BBW0 867 aa9.95□□□□□ -0.82
RNF38-209ENST00000491349 SUPT20HL1Q3ZLR7 823 aa9.95□□□□□ -0.82
RNF38-209ENST00000491349 FKBP1CQ5VVH2 108 aa9.95□□□□□ -0.82
RNF38-209ENST00000491349 KIAA1211Q6ZU35 1233 aa9.95□□□□□ -0.82
RNF38-209ENST00000491349 KRT26Q7Z3Y9 468 aa9.95□□□□□ -0.82
RNF38-209ENST00000491349 RBM46Q8TBY0 533 aaKnown RBP9.95□□□□□ -0.82
RNF38-209ENST00000491349 TRPM4Q8TD43 1214 aa9.95□□□□□ -0.82
RNF38-209ENST00000491349 EDC3Q96F86 508 aaKnown RBP9.95□□□□□ -0.82
RNF38-209ENST00000491349 PRMT6Q96LA8 375 aaPredicted RBP9.95□□□□□ -0.82
RNF38-209ENST00000491349 TDRD3Q9H7E2 651 aaKnown RBP9.95□□□□□ -0.82
RNF38-209ENST00000491349 ZNF70Q9UC06 446 aaPredicted RBP9.95□□□□□ -0.82
RNF38-209ENST00000491349 GOLGB1Q14789 3259 aaKnown RBP9.94□□□□□ -0.82
RNF38-209ENST00000491349 CLRN2A0PK11 232 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 TCP10L2B9ZVM9 353 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 APPP05067 770 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 HLA-DOAP06340 250 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 SDSP20132 328 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 PPP4CP60510 307 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 FAM83AQ86UY5 434 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 MIGA1Q8NAN2 632 aa9.94□□□□□ -0.82
RNF38-209ENST00000491349 DHX36Q9H2U1 1008 aaKnown RBP9.94□□□□□ -0.82
RNF38-209ENST00000491349 RPAP1Q9BWH6 1393 aaPredicted RBP9.93□□□□□ -0.82
RNF38-209ENST00000491349 RAD50Q92878 1312 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 SHTN1A0MZ66 631 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 POTECB2RU33 542 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 ENTPD3O75355 529 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 CDC45O75419 566 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 MBD4O95243 580 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 SLC3A2P08195 630 aaKnown RBP9.93□□□□□ -0.82
RNF38-209ENST00000491349 PICALMQ13492 652 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 GRIK5Q16478 980 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 DCAF15Q66K64 600 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 APOBEC3HQ6NTF7 200 aaKnown RBP9.93□□□□□ -0.82
RNF38-209ENST00000491349 CDC42EP5Q6NZY7 148 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 ATP8A2Q9NTI2 1148 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 SLC4A4Q9Y6R1 1079 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 POLR2AP24928 1970 aaKnown RBP9.93□□□□□ -0.82
RNF38-209ENST00000491349 ADAMTSL1Q8N6G6 1762 aa9.93□□□□□ -0.82
RNF38-209ENST00000491349 GPAA1O43292 621 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 PPP1R12BO60237 982 aaPredicted RBP9.92□□□□□ -0.82
RNF38-209ENST00000491349 ST18O60284 1047 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
RNF38-209ENST00000491349 TDO2P48775 406 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
RNF38-209ENST00000491349 ZMYM1Q5SVZ6 1142 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 CWC27Q6UX04 472 aaKnown RBP9.92□□□□□ -0.82
RNF38-209ENST00000491349 TTC6Q86TZ1 520 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 CRACR2BQ8N4Y2 399 aaPredicted RBP9.92□□□□□ -0.82
RNF38-209ENST00000491349 TGFBRAP1Q8WUH2 860 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 FAM151AQ8WW52 585 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 ZBED3Q96IU2 234 aaPredicted RBP9.92□□□□□ -0.82
RNF38-209ENST00000491349 IDI2Q9BXS1 227 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 DEFB129Q9H1M3 183 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 ZNF287Q9HBT7 754 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
RNF38-209ENST00000491349 PGAP2Q9UHJ9 254 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 MYH1P12882 1939 aa9.92□□□□□ -0.82
RNF38-209ENST00000491349 NAV1Q8NEY1 1877 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 TRPM7Q96QT4 1865 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 FOCADQ5VW36 1801 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 TCRBV5S4A2TA0A5A2 114 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 KIF3CO14782 793 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 GSPT1P15170 499 aaKnown RBP9.91□□□□□ -0.82
RNF38-209ENST00000491349 HIRAP54198 1017 aaPredicted RBP9.91□□□□□ -0.82
RNF38-209ENST00000491349 TCP10Q12799 353 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 RASA3Q14644 834 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 MAP1SQ66K74 1059 aaPredicted RBP9.91□□□□□ -0.82
RNF38-209ENST00000491349 GIMAP6Q6P9H5 292 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 ARMC9Q7Z3E5 817 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 USP48Q86UV5 1035 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 C2orf69Q8N8R5 385 aa9.91□□□□□ -0.82
RNF38-209ENST00000491349 SH3RF3Q8TEJ3 882 aaPredicted RBP9.91□□□□□ -0.82
RNF38-209ENST00000491349 NAPBQ9H115 298 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms