RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 MCMDC2Q4G0Z9 681 aa19.02■□□□□ 0.64
TRA2A-208ENST00000490942 TGFBRAP1Q8WUH2 860 aa19.02■□□□□ 0.64
TRA2A-208ENST00000490942 TMEM39BQ9GZU3 492 aa19.02■□□□□ 0.64
TRA2A-208ENST00000490942 ARMT1Q9H993 441 aa19.02■□□□□ 0.64
TRA2A-208ENST00000490942 DDX4Q9NQI0 724 aaKnown RBP19.02■□□□□ 0.64
TRA2A-208ENST00000490942 DIAPH3Q9NSV4 1193 aa19.02■□□□□ 0.64
TRA2A-208ENST00000490942 CHGBP05060 677 aa19.01■□□□□ 0.63
TRA2A-208ENST00000490942 USP5P45974 858 aa19.01■□□□□ 0.63
TRA2A-208ENST00000490942 MAP3K10Q02779 954 aa19.01■□□□□ 0.63
TRA2A-208ENST00000490942 DDRGK1Q96HY6 314 aa19.01■□□□□ 0.63
TRA2A-208ENST00000490942 RAD50Q92878 1312 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 FOCADQ5VW36 1801 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 TMEM88BA6NKF7 163 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 PPP1R12BO60237 982 aaPredicted RBP19■□□□□ 0.63
TRA2A-208ENST00000490942 TBC1D12O60347 775 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 CELF2O95319 508 aaKnown RBP19■□□□□ 0.63
TRA2A-208ENST00000490942 TCP10Q12799 353 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 PICALMQ13492 652 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 MAP3K11Q16584 847 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 SLFNL1Q499Z3 407 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 CST9Q5W186 159 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 DCAF15Q66K64 600 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 RUFY2Q8WXA3 655 aa19■□□□□ 0.63
TRA2A-208ENST00000490942 DCP1AQ9NPI6 582 aaPredicted RBP19■□□□□ 0.63
TRA2A-208ENST00000490942 M0R2C6 588 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 NMIQ13287 307 aaPredicted RBP18.99■□□□□ 0.63
TRA2A-208ENST00000490942 NBPF12Q5TAG4 269 aaPredicted RBP18.99■□□□□ 0.63
TRA2A-208ENST00000490942 METTL16Q86W50 562 aaKnown RBP18.99■□□□□ 0.63
TRA2A-208ENST00000490942 FOXP4Q8IVH2 680 aaPredicted RBP18.99■□□□□ 0.63
TRA2A-208ENST00000490942 MAPKAPK5Q8IW41 473 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 C2orf69Q8N8R5 385 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 HHIPL1Q96JK4 782 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 CSRNP1Q96S65 589 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 GBA2Q9HCG7 927 aaPredicted RBP18.99■□□□□ 0.63
TRA2A-208ENST00000490942 CREBZFQ9NS37 354 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 PI4KBQ9UBF8 816 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 SLC4A4Q9Y6R1 1079 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 TRPM7Q96QT4 1865 aa18.99■□□□□ 0.63
TRA2A-208ENST00000490942 AK9Q5TCS8 1911 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 A0A0D9SFI3 127 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 PATL2C9JE40 543 aaKnown RBP18.98■□□□□ 0.63
TRA2A-208ENST00000490942 CHMLP26374 656 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 SH3BP5LQ7L8J4 393 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 TTC6Q86TZ1 520 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 ZFPM1Q8IX07 1006 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 FAM227BQ96M60 508 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 SEC62Q99442 399 aaKnown RBP18.98■□□□□ 0.63
TRA2A-208ENST00000490942 NACAP1Q9BZK3 213 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 EHD4Q9H223 541 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 HERC5Q9UII4 1024 aaKnown RBP18.98■□□□□ 0.63
TRA2A-208ENST00000490942 SCAF8Q9UPN6 1271 aaKnown RBP18.98■□□□□ 0.63
TRA2A-208ENST00000490942 PAPPA2Q9BXP8 1791 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 SSC5DA1L4H1 1573 aa18.98■□□□□ 0.63
TRA2A-208ENST00000490942 DDTLA6NHG4 134 aaPredicted RBP18.97■□□□□ 0.63
TRA2A-208ENST00000490942 HLA-DOAP06340 250 aa18.97■□□□□ 0.63
TRA2A-208ENST00000490942 HSPA6P17066 643 aa18.97■□□□□ 0.63
TRA2A-208ENST00000490942 ARMC9Q7Z3E5 817 aa18.97■□□□□ 0.63
TRA2A-208ENST00000490942 SKAP1Q86WV1 359 aa18.97■□□□□ 0.63
TRA2A-208ENST00000490942 ZSCAN29Q8IWY8 852 aaPredicted RBP18.97■□□□□ 0.63
TRA2A-208ENST00000490942 AMOTL1Q8IY63 956 aa18.97■□□□□ 0.63
TRA2A-208ENST00000490942 SDR42E1Q8WUS8 393 aa18.97■□□□□ 0.63
TRA2A-208ENST00000490942 ARPP21Q9UBL0 812 aaPredicted RBP18.97■□□□□ 0.63
TRA2A-208ENST00000490942 CCDC171Q6TFL3 1326 aa18.97■□□□□ 0.63
TRA2A-208ENST00000490942 CDK5RAP2Q96SN8 1893 aa18.97■□□□□ 0.63
TRA2A-208ENST00000490942 GSG1L2A8MUP6 293 aa18.96■□□□□ 0.63
TRA2A-208ENST00000490942 SBK1Q52WX2 424 aa18.96■□□□□ 0.63
TRA2A-208ENST00000490942 PRAMEF18Q5VWM3 479 aa18.96■□□□□ 0.63
TRA2A-208ENST00000490942 CWC27Q6UX04 472 aaKnown RBP18.96■□□□□ 0.63
TRA2A-208ENST00000490942 DLK2Q6UY11 383 aa18.96■□□□□ 0.63
TRA2A-208ENST00000490942 TLL2Q9Y6L7 1015 aa18.96■□□□□ 0.63
TRA2A-208ENST00000490942 ZMYM6O95789 1325 aa18.96■□□□□ 0.63
TRA2A-208ENST00000490942 DDX60LQ5H9U9 1706 aaKnown RBP18.95■□□□□ 0.62
TRA2A-208ENST00000490942 PRKAB2O43741 272 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 IREB2P48200 963 aaKnown RBP18.95■□□□□ 0.62
TRA2A-208ENST00000490942 FMR1Q06787 632 aaKnown RBP eCLIP18.95■□□□□ 0.62
TRA2A-208ENST00000490942 ALX1Q15699 326 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 CASC1Q6TDU7 716 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 SAPCD2Q86UD0 394 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 CDAN1Q8IWY9 1227 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 ZNF341Q9BYN7 854 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 ZNF408Q9H9D4 720 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 MCM9Q9NXL9 1143 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 ZNF112Q9UJU3 913 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 GTF3C3Q9Y5Q9 886 aa18.95■□□□□ 0.62
TRA2A-208ENST00000490942 LDLRAD1Q5T700 205 aa18.94■□□□□ 0.62
TRA2A-208ENST00000490942 IFNL3Q8IZI9 196 aa18.94■□□□□ 0.62
TRA2A-208ENST00000490942 KLRG1Q96E93 195 aa18.94■□□□□ 0.62
TRA2A-208ENST00000490942 PALD1Q9ULE6 856 aa18.94■□□□□ 0.62
TRA2A-208ENST00000490942 CDC45O75419 566 aa18.93■□□□□ 0.62
TRA2A-208ENST00000490942 USP2O75604 605 aaPredicted RBP18.93■□□□□ 0.62
TRA2A-208ENST00000490942 POLR3DP05423 398 aaPredicted RBP18.93■□□□□ 0.62
TRA2A-208ENST00000490942 C12orf60Q5U649 245 aa18.93■□□□□ 0.62
TRA2A-208ENST00000490942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRA2A-208ENST00000490942 SERPINB13Q9UIV8 391 aa18.93■□□□□ 0.62
TRA2A-208ENST00000490942 RASSF10A6NK89 507 aa18.92■□□□□ 0.62
TRA2A-208ENST00000490942 USP17L12C9JPN9 530 aa18.92■□□□□ 0.62
TRA2A-208ENST00000490942 USP17L21D6R901 530 aa18.92■□□□□ 0.62
TRA2A-208ENST00000490942 SGSM2O43147 1006 aa18.92■□□□□ 0.62
TRA2A-208ENST00000490942 APPP05067 770 aa18.92■□□□□ 0.62
TRA2A-208ENST00000490942 MAPK8IP2Q13387 824 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms