RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 SGPL1O95470 568 aa9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 U2AF1L5P0DN76 240 aaPredicted RBP9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 OSBPP22059 807 aa9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 ATP2B4P23634 1241 aa9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 GTF2A2P52657 109 aa9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 U2AF1Q01081 240 aaKnown RBP eCLIP9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 KIF22Q14807 665 aa9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 SUPT20HL1Q3ZLR7 823 aa9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 GMPR2Q9P2T1 348 aaKnown RBP9.36□□□□□ -0.91
PDLIM1-203ENST00000490391 ADGRA2Q96PE1 1338 aa9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 TLL1O43897 1013 aa9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 S1PR4O95977 384 aa9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 MAGEA10P43363 369 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 PSMC4P43686 418 aa9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 C17orf99Q6UX52 265 aa9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 TXNRD3Q86VQ6 643 aa9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 ZCCHC17Q9NP64 241 aaKnown RBP9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 ZMYND8Q9ULU4 1186 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
PDLIM1-203ENST00000490391 CLRN2A0PK11 232 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 SPDYE16A6NNV3 312 aaPredicted RBP9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 BTBD19C9JJ37 291 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 AVPP01185 164 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 SLC4A3P48751 1232 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 VGLL4Q14135 290 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 DLGAP5Q15398 846 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 TTLL5Q6EMB2 1281 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 FAM109BQ6ICB4 259 aaPredicted RBP9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 CERS5Q8N5B7 392 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 PLBD2Q8NHP8 589 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 RAET1EQ8TD07 263 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 PAWRQ96IZ0 340 aaKnown RBP9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 COA1Q9GZY4 146 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 TIMELESSQ9UNS1 1208 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 NUDCQ9Y266 331 aa9.34□□□□□ -0.91
PDLIM1-203ENST00000490391 MYPNQ86TC9 1320 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 IRS2Q9Y4H2 1338 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 KLRK1P26718 216 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 UBXN2AP68543 259 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 RASA3Q14644 834 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 C7orf61Q8IZ16 206 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 TTC13Q8NBP0 860 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 DIS3LQ8TF46 1054 aaKnown RBP9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 PRMT6Q96LA8 375 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 TEPSINQ96N21 525 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 PKD2L1Q9P0L9 805 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 TSPYL4Q9UJ04 414 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 SPEF2Q9C093 1822 aa9.33□□□□□ -0.92
PDLIM1-203ENST00000490391 MGAMO43451 1857 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 MUC6Q6W4X9 2439 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 ARAP2Q8WZ64 1704 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 SPDYE5A6NIY4 337 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 CCT4P50991 539 aaKnown RBP9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 GTF2IP78347 998 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 PRKCZQ05513 592 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 CCDC152Q4G0S7 254 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 ZBTB38Q8NAP3 1195 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 CFAP53Q96M91 514 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 CCDC85AQ96PX6 553 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 VEZTQ9HBM0 779 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 PAK6Q9NQU5 681 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 MINPP1Q9UNW1 487 aa9.32□□□□□ -0.92
PDLIM1-203ENST00000490391 WDHD1O75717 1129 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 SYN1P17600 705 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 CAPN2P17655 700 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 HOXD10P28358 340 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 CFAP100Q494V2 611 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 ANKRD18AQ8IVF6 992 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 DEFB118Q96PH6 123 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 CHPF2Q9P2E5 772 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 BIN2Q9UBW5 565 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 CPA4Q9UI42 421 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 SNCAIPQ9Y6H5 919 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 DOCK3Q8IZD9 2030 aa9.31□□□□□ -0.92
PDLIM1-203ENST00000490391 CHD9Q3L8U1 2897 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 IRF6O14896 467 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 AXIN1O15169 862 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 FMNL1O95466 1100 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 CETPP11597 493 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 CNGB1Q14028 1251 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 NFE2L2Q16236 605 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 NECAB2Q7Z6G3 386 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 FAM122AQ96E09 287 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 FAM161BQ96MY7 647 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 PLEKHF1Q96S99 279 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 UBE2OQ9C0C9 1292 aaKnown RBP9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 CDHR5Q9HBB8 845 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 BSDC1Q9NW68 430 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 GABRQQ9UN88 632 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 XIRP2A4UGR9 3374 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 FAM205AQ6ZU69 1335 aa9.3□□□□□ -0.92
PDLIM1-203ENST00000490391 MYO1BO43795 1136 aa9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 PDE8AO60658 829 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms