RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 DCDC2CA8MYV0 355 aa9.03□□□□□ -0.96
CCDC39-206ENST00000489868 DYNC1LI2O43237 492 aaPredicted RBP9.03□□□□□ -0.96
CCDC39-206ENST00000489868 NFICP08651 508 aa9.03□□□□□ -0.96
CCDC39-206ENST00000489868 RXRBP28702 533 aa9.03□□□□□ -0.96
CCDC39-206ENST00000489868 TTLL4Q14679 1199 aa9.03□□□□□ -0.96
CCDC39-206ENST00000489868 KIAA1522Q9P206 1035 aaPredicted RBP9.03□□□□□ -0.96
CCDC39-206ENST00000489868 PCDHA4Q9UN74 947 aa9.03□□□□□ -0.96
CCDC39-206ENST00000489868 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.02□□□□□ -0.97
CCDC39-206ENST00000489868 RECKO95980 971 aa9.02□□□□□ -0.97
CCDC39-206ENST00000489868 NTF4P34130 210 aa9.02□□□□□ -0.97
CCDC39-206ENST00000489868 RING1Q06587 406 aa9.02□□□□□ -0.97
CCDC39-206ENST00000489868 SCARA3Q6AZY7 606 aa9.02□□□□□ -0.97
CCDC39-206ENST00000489868 LRFN4Q6PJG9 635 aa9.02□□□□□ -0.97
CCDC39-206ENST00000489868 ERMP1Q7Z2K6 904 aa9.02□□□□□ -0.97
CCDC39-206ENST00000489868 C12orf40Q86WS4 652 aa9.02□□□□□ -0.97
CCDC39-206ENST00000489868 ZNF428Q96B54 188 aa9.02□□□□□ -0.97
CCDC39-206ENST00000489868 FAM95CA0A1B0GW59 222 aa9.01□□□□□ -0.97
CCDC39-206ENST00000489868 HCLS1P14317 486 aaPredicted RBP9.01□□□□□ -0.97
CCDC39-206ENST00000489868 ERVK-24P63145 666 aa9.01□□□□□ -0.97
CCDC39-206ENST00000489868 PPM1JQ5JR12 505 aa9.01□□□□□ -0.97
CCDC39-206ENST00000489868 SEZ6L2Q6UXD5 910 aa9.01□□□□□ -0.97
CCDC39-206ENST00000489868 UBE3DQ7Z6J8 389 aa9.01□□□□□ -0.97
CCDC39-206ENST00000489868 RHOVQ96L33 236 aa9.01□□□□□ -0.97
CCDC39-206ENST00000489868 ATXN3LQ9H3M9 355 aa9.01□□□□□ -0.97
CCDC39-206ENST00000489868 LGR6Q9HBX8 967 aa9.01□□□□□ -0.97
CCDC39-206ENST00000489868 IGLV1-40P01703 118 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 ADMP35318 185 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 NFIAQ12857 509 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 NFKBIBQ15653 356 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 RNF43Q68DV7 783 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 GATA6Q92908 595 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 PLPPR2Q96GM1 343 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 RSRP1Q9BUV0 290 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 KBTBD4Q9NVX7 518 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 DAGLAQ9Y4D2 1042 aa9□□□□□ -0.97
CCDC39-206ENST00000489868 PF4P02776 101 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 ITGAEP38570 1179 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 TSNAXIP1Q2TAA8 658 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 TMEM87AQ8NBN3 555 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 ISL2Q96A47 359 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 MRRFQ96E11 262 aaKnown RBP8.99□□□□□ -0.97
CCDC39-206ENST00000489868 MFSD14AQ96MC6 490 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 TMEM74Q96NL1 305 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 C1GALT1Q9NS00 363 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 PRKAG2Q9UGJ0 569 aa8.99□□□□□ -0.97
CCDC39-206ENST00000489868 RLBP1P12271 317 aa8.98□□□□□ -0.97
CCDC39-206ENST00000489868 VAMP1P23763 118 aa8.98□□□□□ -0.97
CCDC39-206ENST00000489868 CAMK2GQ13555 558 aaPredicted RBP8.98□□□□□ -0.97
CCDC39-206ENST00000489868 BNC2Q6ZN30 1099 aaPredicted RBP8.98□□□□□ -0.97
CCDC39-206ENST00000489868 CYFIP1Q7L576 1253 aa8.98□□□□□ -0.97
CCDC39-206ENST00000489868 RNF214Q8ND24 703 aa8.98□□□□□ -0.97
CCDC39-206ENST00000489868 MIR1-1HGQ9H1L0 117 aa8.98□□□□□ -0.97
CCDC39-206ENST00000489868 MINDY4BA8MYZ0 360 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 GARTP22102 1010 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 GBP2P32456 591 aaPredicted RBP8.97□□□□□ -0.97
CCDC39-206ENST00000489868 FANCCQ00597 558 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 WIPI1Q5MNZ9 446 aaPredicted RBP8.97□□□□□ -0.97
CCDC39-206ENST00000489868 ZBTB37Q5TC79 503 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 PAOXQ6QHF9 649 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 ZDHHC13Q8IUH4 622 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 SMYD4Q8IYR2 804 aaPredicted RBP8.97□□□□□ -0.97
CCDC39-206ENST00000489868 DBNDD2Q9BQY9 259 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 YIPF2Q9BWQ6 316 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 PIDD1Q9HB75 910 aa8.97□□□□□ -0.97
CCDC39-206ENST00000489868 GFRA2O00451 464 aa8.96□□□□□ -0.98
CCDC39-206ENST00000489868 RNGTTO60942 597 aaKnown RBP8.96□□□□□ -0.98
CCDC39-206ENST00000489868 F13BP05160 661 aa8.96□□□□□ -0.98
CCDC39-206ENST00000489868 HNRNPUQ00839 825 aaKnown RBP eCLIP8.96□□□□□ -0.98
CCDC39-206ENST00000489868 LMNB2Q03252 620 aa8.96□□□□□ -0.98
CCDC39-206ENST00000489868 FAM160A1Q05DH4 1040 aa8.96□□□□□ -0.98
CCDC39-206ENST00000489868 FBXL6Q8N531 539 aa8.96□□□□□ -0.98
CCDC39-206ENST00000489868 SHKBP1Q8TBC3 707 aa8.96□□□□□ -0.98
CCDC39-206ENST00000489868 JARID2Q92833 1246 aaPredicted RBP8.96□□□□□ -0.98
CCDC39-206ENST00000489868 GGT7Q9UJ14 662 aa8.96□□□□□ -0.98
CCDC39-206ENST00000489868 PRAMEF27A3QJZ7 478 aa8.95□□□□□ -0.98
CCDC39-206ENST00000489868 FAM221AA4D161 298 aa8.95□□□□□ -0.98
CCDC39-206ENST00000489868 F13A1P00488 732 aa8.95□□□□□ -0.98
CCDC39-206ENST00000489868 LMNB1P20700 586 aa8.95□□□□□ -0.98
CCDC39-206ENST00000489868 CDK5R2Q13319 367 aa8.95□□□□□ -0.98
CCDC39-206ENST00000489868 MAP7Q14244 749 aa8.95□□□□□ -0.98
CCDC39-206ENST00000489868 RELL1Q8IUW5 271 aa8.95□□□□□ -0.98
CCDC39-206ENST00000489868 ELMO3Q96BJ8 720 aa8.95□□□□□ -0.98
CCDC39-206ENST00000489868 PRR19A6NJB7 356 aa8.94□□□□□ -0.98
CCDC39-206ENST00000489868 HS2ST1Q7LGA3 356 aa8.94□□□□□ -0.98
CCDC39-206ENST00000489868 ZAR1Q86SH2 424 aa8.94□□□□□ -0.98
CCDC39-206ENST00000489868 BCL11AQ9H165 835 aa8.94□□□□□ -0.98
CCDC39-206ENST00000489868 FBRSQ9HAH7 460 aa8.94□□□□□ -0.98
CCDC39-206ENST00000489868 FAM170BA6NMN3 283 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 GSC2O15499 205 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 CILPO75339 1184 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 TGFB1P01137 390 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 ZNF76P36508 570 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 FBXL19Q6PCT2 694 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 HDXQ7Z353 690 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 FBXO27Q8NI29 283 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 TBC1D32Q96NH3 1257 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 PSMG3-AS1Q96PY0 264 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 ADAMTS1Q9UHI8 967 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 SNCAIPQ9Y6H5 919 aa8.93□□□□□ -0.98
CCDC39-206ENST00000489868 WDR64B1ANS9 1081 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms