RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 NTRK3Q16288 839 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 NAT10Q9H0A0 1025 aaKnown RBP18.18■□□□□ 0.5
BRD9-208ENST00000489816 CBX1P83916 185 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 SLC39A14Q15043 492 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 ZNF827Q17R98 1081 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 ATL3Q6DD88 541 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 GRAMD1CQ8IYS0 662 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 AKAP11Q9UKA4 1901 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 KDM4FA0A1W2PPD8 638 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 LONRF3Q496Y0 759 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 AKNAD1Q5T1N1 836 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 FAM182BQ5T319 152 aa18.17■□□□□ 0.5
BRD9-208ENST00000489816 DYNLL1P63167 89 aaKnown RBP18.16■□□□□ 0.5
BRD9-208ENST00000489816 SSRP1Q08945 709 aaKnown RBP18.16■□□□□ 0.5
BRD9-208ENST00000489816 NBPF11Q86T75 865 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 OXER1Q8TDS5 423 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 A0A1W2PQ27 194 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 A0A1W2PQ64 194 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 A0A1W2PQD8 194 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 SLC51AQ86UW1 340 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 MROH5Q6ZUA9 1318 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 FAM205CA6NFA0 338 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 PTF1AQ7RTS3 328 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 FBXL16Q8N461 479 aa18.16■□□□□ 0.5
BRD9-208ENST00000489816 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
BRD9-208ENST00000489816 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.15■□□□□ 0.5
BRD9-208ENST00000489816 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
BRD9-208ENST00000489816 MARCH10Q8NA82 808 aaPredicted RBP18.15■□□□□ 0.5
BRD9-208ENST00000489816 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.15■□□□□ 0.5
BRD9-208ENST00000489816 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
BRD9-208ENST00000489816 CMA1P23946 247 aa18.15■□□□□ 0.5
BRD9-208ENST00000489816 WTAPQ15007 396 aa18.15■□□□□ 0.5
BRD9-208ENST00000489816 USP49Q70CQ1 688 aa18.15■□□□□ 0.5
BRD9-208ENST00000489816 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
BRD9-208ENST00000489816 MRFAP1L1Q96HT8 127 aa18.15■□□□□ 0.5
BRD9-208ENST00000489816 MTMR7Q9Y216 660 aa18.15■□□□□ 0.5
BRD9-208ENST00000489816 ABCC6O95255 1503 aa18.15■□□□□ 0.5
BRD9-208ENST00000489816 ERVV-1B6SEH8 477 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 CDKL5O76039 1030 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 CCDC152Q4G0S7 254 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 DPF2Q92785 391 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 KLRK1P26718 216 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 TMEM87BQ96K49 555 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 CAMTA2O94983 1202 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 CAVIN2O95810 425 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 RTN1Q16799 776 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 ERFEQ4G0M1 354 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 CNNM3Q8NE01 707 aa18.14■□□□□ 0.49
BRD9-208ENST00000489816 PTPAQ15257 358 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 SARM1Q6SZW1 724 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 ZMYND15Q9H091 742 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 CABP5Q9NP86 173 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 TFCP2L1Q9NZI6 479 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 PCDHB6Q9Y5E3 794 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 ERICH2A1L162 156 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 CASP1P29466 404 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 CCZ1BP86790 482 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 CCZ1P86791 482 aaPredicted RBP18.13■□□□□ 0.49
BRD9-208ENST00000489816 CEP135Q66GS9 1140 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 UBAC1Q9BSL1 405 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 NACAP1Q9BZK3 213 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 SLIT2O94813 1529 aa18.13■□□□□ 0.49
BRD9-208ENST00000489816 U2AF2P26368 475 aaKnown RBP eCLIP18.12■□□□□ 0.49
BRD9-208ENST00000489816 VPS54Q9P1Q0 977 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 PCDHA5Q9Y5H7 936 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 SERPINC1P01008 464 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 TOB1P50616 345 aaPredicted RBP18.12■□□□□ 0.49
BRD9-208ENST00000489816 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 TRMT44Q8IYL2 757 aaKnown RBP18.12■□□□□ 0.49
BRD9-208ENST00000489816 MAP3K14Q99558 947 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 KCNH3Q9ULD8 1083 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 NLRP12P59046 1061 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 PTPN14Q15678 1187 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 CCDC112Q8NEF3 446 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 TMX1Q9H3N1 280 aa18.12■□□□□ 0.49
BRD9-208ENST00000489816 POLR2DO15514 142 aaKnown RBP18.11■□□□□ 0.49
BRD9-208ENST00000489816 NMT2O60551 498 aa18.11■□□□□ 0.49
BRD9-208ENST00000489816 NCAPHQ15003 741 aa18.11■□□□□ 0.49
BRD9-208ENST00000489816 CFAP100Q494V2 611 aa18.11■□□□□ 0.49
BRD9-208ENST00000489816 NOM1Q5C9Z4 860 aaKnown RBP18.11■□□□□ 0.49
BRD9-208ENST00000489816 FAM177A1Q8N128 213 aaPredicted RBP18.11■□□□□ 0.49
BRD9-208ENST00000489816 ZNF512BQ96KM6 892 aaPredicted RBP18.11■□□□□ 0.49
BRD9-208ENST00000489816 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
BRD9-208ENST00000489816 PPARAQ07869 468 aa18.11■□□□□ 0.49
BRD9-208ENST00000489816 ARMCX5Q6P1M9 558 aa18.11■□□□□ 0.49
BRD9-208ENST00000489816 METTL16Q86W50 562 aaKnown RBP18.11■□□□□ 0.49
BRD9-208ENST00000489816 FANCLQ9NW38 375 aa18.11■□□□□ 0.49
BRD9-208ENST00000489816 ITGB4P16144 1822 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 TMEM232C9JQI7 657 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 COBLO75128 1261 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 FANCCQ00597 558 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 PDE4BQ07343 736 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 NOSTRINQ8IVI9 506 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 TRIM22Q8IYM9 498 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 PDCL2Q8N4E4 241 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 STAMQ92783 540 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 CELF1Q92879 486 aaKnown RBP18.1■□□□□ 0.49
BRD9-208ENST00000489816 EP400Q96L91 3159 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 IGSF3O75054 1194 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 NTSR2O95665 410 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms