RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 AKAP11Q9UKA4 1901 aa23.2■■□□□ 1.3
MRPL55-230ENST00000489430 IFIT2P09913 472 aaKnown RBP23.19■■□□□ 1.3
MRPL55-230ENST00000489430 PPATQ06203 517 aa23.19■■□□□ 1.3
MRPL55-230ENST00000489430 NOL9Q5SY16 702 aaKnown RBP23.19■■□□□ 1.3
MRPL55-230ENST00000489430 ZFPM1Q8IX07 1006 aa23.19■■□□□ 1.3
MRPL55-230ENST00000489430 MS4A4AQ96JQ5 239 aa23.19■■□□□ 1.3
MRPL55-230ENST00000489430 MYH2Q9UKX2 1941 aa23.19■■□□□ 1.3
MRPL55-230ENST00000489430 COL2A1P02458 1487 aaPredicted RBP23.18■■□□□ 1.3
MRPL55-230ENST00000489430 PPIL2Q13356 520 aa23.18■■□□□ 1.3
MRPL55-230ENST00000489430 TTF1Q15361 905 aaPredicted RBP23.18■■□□□ 1.3
MRPL55-230ENST00000489430 ZSCAN29Q8IWY8 852 aaPredicted RBP23.18■■□□□ 1.3
MRPL55-230ENST00000489430 ZKSCAN4Q969J2 545 aaPredicted RBP23.18■■□□□ 1.3
MRPL55-230ENST00000489430 DDX4Q9NQI0 724 aaKnown RBP23.18■■□□□ 1.3
MRPL55-230ENST00000489430 LAMB1P07942 1786 aa23.17■■□□□ 1.3
MRPL55-230ENST00000489430 GPR25O00155 361 aa23.17■■□□□ 1.3
MRPL55-230ENST00000489430 IGF2BP3O00425 579 aaKnown RBP eCLIP23.17■■□□□ 1.3
MRPL55-230ENST00000489430 TBC1D12O60347 775 aa23.17■■□□□ 1.3
MRPL55-230ENST00000489430 TBC1D8O95759 1140 aa23.17■■□□□ 1.3
MRPL55-230ENST00000489430 RRP1P56182 461 aaKnown RBP23.17■■□□□ 1.3
MRPL55-230ENST00000489430 SH3BP5LQ7L8J4 393 aa23.17■■□□□ 1.3
MRPL55-230ENST00000489430 OTUD5Q96G74 571 aa23.17■■□□□ 1.3
MRPL55-230ENST00000489430 PIH1D3Q9NQM4 214 aaKnown RBP23.17■■□□□ 1.3
MRPL55-230ENST00000489430 MAP3K12Q12852 859 aa23.16■■□□□ 1.3
MRPL55-230ENST00000489430 PICALMQ13492 652 aa23.16■■□□□ 1.3
MRPL55-230ENST00000489430 ZCCHC17Q9NP64 241 aaKnown RBP23.16■■□□□ 1.3
MRPL55-230ENST00000489430 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.16■■□□□ 1.3
MRPL55-230ENST00000489430 OTOFQ9HC10 1997 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 DDTLA6NHG4 134 aaPredicted RBP23.15■■□□□ 1.3
MRPL55-230ENST00000489430 CETPP11597 493 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 INPP5BP32019 993 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 SNAPC2Q13487 334 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 TEX11Q8IYF3 940 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 CNKSR2Q8WXI2 1034 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 ABHD8Q96I13 439 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 PTPN18Q99952 460 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 LRRCC1Q9C099 1032 aa23.15■■□□□ 1.3
MRPL55-230ENST00000489430 OSBPL5Q9H0X9 879 aaPredicted RBP23.15■■□□□ 1.3
MRPL55-230ENST00000489430 DHX36Q9H2U1 1008 aaKnown RBP23.15■■□□□ 1.3
MRPL55-230ENST00000489430 PHF20L1A8MW92 1017 aa23.14■■□□□ 1.29
MRPL55-230ENST00000489430 APBB1O00213 710 aa23.14■■□□□ 1.29
MRPL55-230ENST00000489430 IDH1O75874 414 aaKnown RBP23.14■■□□□ 1.29
MRPL55-230ENST00000489430 ZNF296Q8WUU4 475 aaPredicted RBP23.14■■□□□ 1.29
MRPL55-230ENST00000489430 AATFQ9NY61 560 aaKnown RBP eCLIP23.14■■□□□ 1.29
MRPL55-230ENST00000489430 CCL15-CCL14A0A0B4J2E2 113 aa23.13■■□□□ 1.29
MRPL55-230ENST00000489430 IRF6O14896 467 aa23.13■■□□□ 1.29
MRPL55-230ENST00000489430 CTNND1O60716 968 aaKnown RBP23.13■■□□□ 1.29
MRPL55-230ENST00000489430 DGKZQ13574 1117 aa23.13■■□□□ 1.29
MRPL55-230ENST00000489430 PKN2Q16513 984 aaKnown RBP23.13■■□□□ 1.29
MRPL55-230ENST00000489430 CCL15Q16663 113 aa23.13■■□□□ 1.29
MRPL55-230ENST00000489430 CTU1Q7Z7A3 348 aaKnown RBP23.13■■□□□ 1.29
MRPL55-230ENST00000489430 SH3RF3Q8TEJ3 882 aaPredicted RBP23.13■■□□□ 1.29
MRPL55-230ENST00000489430 BRI3BPQ8WY22 251 aa23.13■■□□□ 1.29
MRPL55-230ENST00000489430 MCOLN1Q9GZU1 580 aa23.13■■□□□ 1.29
MRPL55-230ENST00000489430 DCTPP1Q9H773 170 aa23.13■■□□□ 1.29
MRPL55-230ENST00000489430 FKTNO75072 461 aa23.12■■□□□ 1.29
MRPL55-230ENST00000489430 CYP7A1P22680 504 aa23.12■■□□□ 1.29
MRPL55-230ENST00000489430 ADGRA1Q86SQ6 560 aa23.12■■□□□ 1.29
MRPL55-230ENST00000489430 SCYL3Q8IZE3 742 aa23.12■■□□□ 1.29
MRPL55-230ENST00000489430 YTHDC1Q96MU7 727 aaKnown RBP23.12■■□□□ 1.29
MRPL55-230ENST00000489430 KCNH4Q9UQ05 1017 aa23.12■■□□□ 1.29
MRPL55-230ENST00000489430 MAST2Q6P0Q8 1798 aa23.12■■□□□ 1.29
MRPL55-230ENST00000489430 ATP5JP18859 108 aa23.11■■□□□ 1.29
MRPL55-230ENST00000489430 ANTXR1Q9H6X2 564 aa23.11■■□□□ 1.29
MRPL55-230ENST00000489430 PICK1Q9NRD5 415 aa23.11■■□□□ 1.29
MRPL55-230ENST00000489430 PI4KBQ9UBF8 816 aa23.11■■□□□ 1.29
MRPL55-230ENST00000489430 HERC5Q9UII4 1024 aaKnown RBP23.11■■□□□ 1.29
MRPL55-230ENST00000489430 CXCL11O14625 94 aa23.1■■□□□ 1.29
MRPL55-230ENST00000489430 MAGEB6Q8N7X4 407 aa23.1■■□□□ 1.29
MRPL55-230ENST00000489430 CASP8AP2Q9UKL3 1982 aa23.09■■□□□ 1.29
MRPL55-230ENST00000489430 CRHR2Q13324 411 aa23.09■■□□□ 1.29
MRPL55-230ENST00000489430 AAMPQ13685 434 aa23.09■■□□□ 1.29
MRPL55-230ENST00000489430 R3HDMLQ9H3Y0 253 aa23.09■■□□□ 1.29
MRPL55-230ENST00000489430 METTL16Q86W50 562 aaKnown RBP23.08■■□□□ 1.29
MRPL55-230ENST00000489430 FOXP4Q8IVH2 680 aaPredicted RBP23.08■■□□□ 1.29
MRPL55-230ENST00000489430 TGFBRAP1Q8WUH2 860 aa23.08■■□□□ 1.29
MRPL55-230ENST00000489430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.29
MRPL55-230ENST00000489430 ZFYVE28Q9HCC9 887 aa23.08■■□□□ 1.29
MRPL55-230ENST00000489430 NDUFB9Q9Y6M9 179 aa23.08■■□□□ 1.29
MRPL55-230ENST00000489430 FLT1P17948 1338 aa23.08■■□□□ 1.28
MRPL55-230ENST00000489430 PTPRAP18433 802 aa23.07■■□□□ 1.28
MRPL55-230ENST00000489430 HAUS7Q99871 368 aa23.07■■□□□ 1.28
MRPL55-230ENST00000489430 TBC1D2Q9BYX2 928 aa23.07■■□□□ 1.28
MRPL55-230ENST00000489430 TAF1CQ15572 869 aaPredicted RBP23.06■■□□□ 1.28
MRPL55-230ENST00000489430 SLC9C2Q5TAH2 1124 aa23.06■■□□□ 1.28
MRPL55-230ENST00000489430 ANKRD23Q86SG2 305 aa23.06■■□□□ 1.28
MRPL55-230ENST00000489430 FAM43AQ8N2R8 423 aa23.06■■□□□ 1.28
MRPL55-230ENST00000489430 PAG1Q9NWQ8 432 aa23.06■■□□□ 1.28
MRPL55-230ENST00000489430 DOCK2Q92608 1830 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 BTBD19C9JJ37 291 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 GOLIM4O00461 696 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 CAPN15O75808 1086 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 PDE6AP16499 860 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 MAPKAPK5Q8IW41 473 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 ERO1AQ96HE7 468 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 DNAJC2Q99543 621 aaKnown RBP23.05■■□□□ 1.28
MRPL55-230ENST00000489430 AFG3L2Q9Y4W6 797 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 PCDHB15Q9Y5E8 787 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 ZHX2Q9Y6X8 837 aa23.05■■□□□ 1.28
MRPL55-230ENST00000489430 FASTKD5Q7L8L6 764 aaKnown RBP23.04■■□□□ 1.28
MRPL55-230ENST00000489430 GPATCH3Q96I76 525 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms