RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 RGS17Q9UGC6 210 aaPredicted RBP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 NIP7Q9Y221 180 aaKnown RBP eCLIP22.69■■□□□ 1.22
SYNGR1-207ENST00000489206 FMNL1O95466 1100 aaPredicted RBP22.68■■□□□ 1.22
SYNGR1-207ENST00000489206 PFKFB1P16118 471 aa22.68■■□□□ 1.22
SYNGR1-207ENST00000489206 IFNAR1P17181 557 aa22.68■■□□□ 1.22
SYNGR1-207ENST00000489206 SSRP1Q08945 709 aaKnown RBP22.68■■□□□ 1.22
SYNGR1-207ENST00000489206 AOPEPQ8N6M6 819 aa22.68■■□□□ 1.22
SYNGR1-207ENST00000489206 SMARCC1Q92922 1105 aaPredicted RBP22.68■■□□□ 1.22
SYNGR1-207ENST00000489206 SENP2Q9HC62 589 aa22.68■■□□□ 1.22
SYNGR1-207ENST00000489206 FAM13BQ9NYF5 915 aa22.68■■□□□ 1.22
SYNGR1-207ENST00000489206 TDO2P48775 406 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 NLRP12P59046 1061 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 CTDSPL2Q05D32 466 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 LRMPQ12912 555 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 ITPK1Q13572 414 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 TMTC2Q8N394 836 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 AIFM3Q96NN9 605 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 MYH6P13533 1939 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 RANBP6O60518 1105 aaKnown RBP22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 RXRAP19793 462 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 RBM10P98175 930 aaKnown RBP22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 CHRNDQ07001 517 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 CCDC144BQ3MJ40 725 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 CCDC144CPQ8IYA2 1237 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 CACTINQ8WUQ7 758 aaKnown RBP22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 PHKBQ93100 1093 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 SLC4A4Q9Y6R1 1079 aa22.67■■□□□ 1.22
SYNGR1-207ENST00000489206 FAM177BA6PVY3 158 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 BCAMP50895 628 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 PTPAQ15257 358 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 CLEC4GQ6UXB4 293 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 LCORLQ8N3X6 602 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 MARCH10Q8NA82 808 aaPredicted RBP22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 HPSEQ9Y251 543 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 SCN7AQ01118 1682 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 MROH7-TTC4A0A0A0MT08 1334 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 ZNF804BA4D1E1 1349 aa22.66■■□□□ 1.22
SYNGR1-207ENST00000489206 TPM4P67936 248 aa22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 GLIPR1L2Q4G1C9 344 aa22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 LRRC8AQ8IWT6 810 aa22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 C8orf37Q96NL8 207 aa22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 MAP3K14Q99558 947 aa22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 ERICH2A1L162 156 aa22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 WDHD1O75717 1129 aaPredicted RBP22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 LRP2BPQ9P2M1 347 aa22.65■■□□□ 1.22
SYNGR1-207ENST00000489206 CCDC196A0A1B0GTZ2 297 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 SMTNL1A8MU46 457 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 SNAP23O00161 211 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 RGL2O15211 777 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 CUTAO60888 179 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 SYKP43405 635 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 GSDMDP57764 484 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 DHX8Q14562 1220 aaKnown RBP22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 WTAPQ15007 396 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 TRIM22Q8IYM9 498 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 ACSBG1Q96GR2 724 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 SLC26A6Q9BXS9 759 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 GNL3LQ9NVN8 582 aaKnown RBP22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 IMPACTQ9P2X3 320 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 TACC3Q9Y6A5 838 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 SPATA31A5Q5VU36 1347 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 SPATA31A7Q8IWB4 1347 aa22.64■■□□□ 1.21
SYNGR1-207ENST00000489206 DPCR1Q3MIW9 517 aa22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 BARGINQ6ZT62 677 aa22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 CACNA1SQ13698 1873 aa22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 SAFBQ15424 915 aaKnown RBP eCLIP22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 RTN1Q16799 776 aa22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 RESP18Q5W5W9 173 aa22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 ERCC4Q92889 916 aaPredicted RBP22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 INCENPQ9NQS7 918 aa22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 TUBE1Q9UJT0 475 aa22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 ANAPC4Q9UJX5 808 aa22.63■■□□□ 1.21
SYNGR1-207ENST00000489206 DLEC1Q9Y238 1755 aa22.62■■□□□ 1.21
SYNGR1-207ENST00000489206 MYH13Q9UKX3 1938 aa22.62■■□□□ 1.21
SYNGR1-207ENST00000489206 A0A0G2JS52 829 aa22.62■■□□□ 1.21
SYNGR1-207ENST00000489206 PRKAB2O43741 272 aa22.62■■□□□ 1.21
SYNGR1-207ENST00000489206 MARCKSP29966 332 aaPredicted RBP22.62■■□□□ 1.21
SYNGR1-207ENST00000489206 UBE4AQ14139 1066 aa22.62■■□□□ 1.21
SYNGR1-207ENST00000489206 MYL10Q9BUA6 226 aa22.62■■□□□ 1.21
SYNGR1-207ENST00000489206 A0A087WWV3 80 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 IKBKBO14920 756 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 PPP2R5BQ15173 497 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 ELOA2Q8IYF1 753 aaPredicted RBP22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 MMP1P03956 469 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 CYP7A1P22680 504 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 PPARAQ07869 468 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 SF3B3Q15393 1217 aaKnown RBP22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 SHC4Q6S5L8 630 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 ANKRD18AQ8IVF6 992 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 NOSTRINQ8IVI9 506 aa22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 OSBPL5Q9H0X9 879 aaPredicted RBP22.61■■□□□ 1.21
SYNGR1-207ENST00000489206 COL4A1P02462 1669 aa22.6■■□□□ 1.21
SYNGR1-207ENST00000489206 DEXIO95424 95 aa22.6■■□□□ 1.21
SYNGR1-207ENST00000489206 FOXP1Q9H334 677 aaPredicted RBP22.6■■□□□ 1.21
SYNGR1-207ENST00000489206 RRP12Q5JTH9 1297 aaKnown RBP22.59■■□□□ 1.21
SYNGR1-207ENST00000489206 TOMM22Q9NS69 142 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms