RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 Q6ZUG5 572 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 ANKRD18AQ8IVF6 992 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 FAM184AQ8NB25 1140 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 SPATA5Q8NB90 893 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 NCOA7Q8NI08 942 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 OSBP2Q969R2 916 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 CCDC85AQ96PX6 553 aaPredicted RBP7.8□□□□□ -1.16
HDLBP-243ENST00000488923 SCAND2PQ9GZW5 306 aaPredicted RBP7.8□□□□□ -1.16
HDLBP-243ENST00000488923 NARFQ9UHQ1 456 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 VPS37CA5D8V6 355 aaPredicted RBP7.79□□□□□ -1.16
HDLBP-243ENST00000488923 H3BQV1 296 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 M0R2C6 588 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 LARGE1O95461 756 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 GTF2E1P29083 439 aaPredicted RBP7.79□□□□□ -1.16
HDLBP-243ENST00000488923 MCAMP43121 646 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 NT5C2P49902 561 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 CCDC173Q0VFZ6 552 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 UBE4AQ14139 1066 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 CAVIN4Q5BKX8 364 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 CCDC183Q5T5S1 534 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 SLC9C2Q5TAH2 1124 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 NAA16Q6N069 864 aaPredicted RBP7.79□□□□□ -1.16
HDLBP-243ENST00000488923 CPLX2Q6PUV4 134 aaKnown RBP7.79□□□□□ -1.16
HDLBP-243ENST00000488923 LRSAM1Q6UWE0 723 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 SYNE4Q8N205 404 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 BRF1Q92994 677 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 AIDAQ96BJ3 306 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 TMEM87BQ96K49 555 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 MTA3Q9BTC8 594 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 NACAP1Q9BZK3 213 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 ANKRD2Q9GZV1 360 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 CNNM2Q9H8M5 875 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 BSDC1Q9NW68 430 aaPredicted RBP7.79□□□□□ -1.16
HDLBP-243ENST00000488923 CFAP45Q9UL16 551 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 RTCBQ9Y3I0 505 aaKnown RBP7.79□□□□□ -1.16
HDLBP-243ENST00000488923 NDUFB9Q9Y6M9 179 aa7.79□□□□□ -1.16
HDLBP-243ENST00000488923 PDS5AQ29RF7 1337 aaKnown RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 NUP98P52948 1817 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 MYH3P11055 1940 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 IDH1O75874 414 aaKnown RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 FGAP02671 866 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 PCP11498 1178 aaKnown RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 HCLS1P14317 486 aaPredicted RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 PHKA1P46020 1223 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 NASPP49321 788 aaPredicted RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 SCARF1Q14162 830 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 CTC1Q2NKJ3 1217 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 KMT5BQ4FZB7 885 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 MEX3CQ5U5Q3 659 aaKnown RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 FOXD4L5Q5VV16 416 aaPredicted RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 TPTE2Q6XPS3 522 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 NECAB1Q8N987 351 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 LINC00116Q8NCU8 138 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 SMARCC2Q8TAQ2 1214 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 GPT2Q8TD30 523 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 FOXD4L4Q8WXT5 416 aaPredicted RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 TRIM44Q96DX7 344 aaPredicted RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 SETDB2Q96T68 719 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 LAMB2P55268 1798 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 COL5A3P25940 1745 aaPredicted RBP7.78□□□□□ -1.16
HDLBP-243ENST00000488923 PNPLA7Q6ZV29 1317 aa7.78□□□□□ -1.16
HDLBP-243ENST00000488923 BCORQ6W2J9 1755 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 THSD7AQ9UPZ6 1657 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 GOLGA6L4A6NEF3 574 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 FAM181BA6NEQ2 426 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 PATL2C9JE40 543 aaKnown RBP7.77□□□□□ -1.17
HDLBP-243ENST00000488923 AXIN1O15169 862 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 KCNQ2O43526 872 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 CDKL5O76039 1030 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 PDE6AP16499 860 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 CHRNDQ07001 517 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 ST3GAL1Q11201 340 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 NFX1Q12986 1120 aaKnown RBP7.77□□□□□ -1.17
HDLBP-243ENST00000488923 STOX1Q6ZVD7 989 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 USP48Q86UV5 1035 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 FAM43AQ8N2R8 423 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 GJD4Q96KN9 370 aaPredicted RBP7.77□□□□□ -1.17
HDLBP-243ENST00000488923 ZNF396Q96N95 335 aaPredicted RBP7.77□□□□□ -1.17
HDLBP-243ENST00000488923 KRT23Q9C075 422 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 RNF41Q9H4P4 317 aaPredicted RBP7.77□□□□□ -1.17
HDLBP-243ENST00000488923 CCNL1Q9UK58 526 aaPredicted RBP7.77□□□□□ -1.17
HDLBP-243ENST00000488923 TRPC5Q9UL62 973 aaPredicted RBP7.77□□□□□ -1.17
HDLBP-243ENST00000488923 DENND2AQ9ULE3 1009 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 ARAP2Q8WZ64 1704 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 ZNF804BA4D1E1 1349 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 ZNF532Q9HCE3 1301 aa7.77□□□□□ -1.17
HDLBP-243ENST00000488923 NHSQ6T4R5 1651 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 TCRBV5S4A2TA0A5A2 114 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 PRC1O43663 620 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 ACTN4O43707 911 aaKnown RBP7.76□□□□□ -1.17
HDLBP-243ENST00000488923 ADH1BP00325 375 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 AVPP01185 164 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 APPP05067 770 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 PDIA3P30101 505 aaKnown RBP7.76□□□□□ -1.17
HDLBP-243ENST00000488923 RCAN1P53805 252 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 SCRN1Q12765 414 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 STK3Q13188 491 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 RASGRF1Q13972 1273 aa7.76□□□□□ -1.17
HDLBP-243ENST00000488923 SART3Q15020 963 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms