RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 ZKSCAN4Q969J2 545 aaPredicted RBP16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 COL2A1P02458 1487 aaPredicted RBP16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 CETPP11597 493 aa16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 PPATQ06203 517 aa16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 SNAPC2Q13487 334 aa16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 TBC1D9Q6ZT07 1266 aa16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 ZNF112Q9UJU3 913 aa16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 COG6Q9Y2V7 657 aa16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 ATAD5Q96QE3 1844 aa16.91■□□□□ 0.3
SPTLC1-207ENST00000488921 ATRNL1Q5VV63 1379 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 INPP5BP32019 993 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 CRHR2Q13324 411 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 PICALMQ13492 652 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 ZNF384Q8TF68 577 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 BRI3BPQ8WY22 251 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 PTPN18Q99952 460 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 ZCCHC17Q9NP64 241 aaKnown RBP16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 EXOC6BQ9Y2D4 811 aa16.9■□□□□ 0.3
SPTLC1-207ENST00000488921 BAG3O95817 575 aa16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 RHBDL3P58872 404 aa16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 NAA16Q6N069 864 aaPredicted RBP16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 ZFPM1Q8IX07 1006 aa16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 EAF2Q96CJ1 260 aaPredicted RBP16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 ERO1AQ96HE7 468 aa16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 SNRKQ9NRH2 765 aa16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 ZBTB40Q9NUA8 1239 aa16.89■□□□□ 0.29
SPTLC1-207ENST00000488921 PTPRFP10586 1907 aa16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 IRF6O14896 467 aa16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 CYP2E1P05181 493 aaPredicted RBP16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 PLCG2P16885 1265 aa16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 PDE3AQ14432 1141 aa16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 TAF1CQ15572 869 aaPredicted RBP16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 ZFYVE28Q9HCC9 887 aa16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 DDX4Q9NQI0 724 aaKnown RBP16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 PHIPQ8WWQ0 1821 aa16.88■□□□□ 0.29
SPTLC1-207ENST00000488921 MAP3K10Q02779 954 aa16.87■□□□□ 0.29
SPTLC1-207ENST00000488921 FBXO46Q6PJ61 603 aaPredicted RBP16.87■□□□□ 0.29
SPTLC1-207ENST00000488921 AACSQ86V21 672 aa16.87■□□□□ 0.29
SPTLC1-207ENST00000488921 TEX11Q8IYF3 940 aa16.87■□□□□ 0.29
SPTLC1-207ENST00000488921 RHPN1Q8TCX5 695 aa16.87■□□□□ 0.29
SPTLC1-207ENST00000488921 KIF1BPQ96EK5 621 aa16.87■□□□□ 0.29
SPTLC1-207ENST00000488921 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
SPTLC1-207ENST00000488921 DDTLA6NHG4 134 aaPredicted RBP16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 ZAP70P43403 619 aa16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 SP3Q02447 781 aa16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 TMED8Q6PL24 325 aaPredicted RBP16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 SCYL3Q8IZE3 742 aa16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 FAM43AQ8N2R8 423 aa16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 KCNH4Q9UQ05 1017 aa16.86■□□□□ 0.29
SPTLC1-207ENST00000488921 SIPA1L1O43166 1804 aa16.85■□□□□ 0.29
SPTLC1-207ENST00000488921 TBC1D12O60347 775 aa16.85■□□□□ 0.29
SPTLC1-207ENST00000488921 RAB11FIP3O75154 756 aa16.85■□□□□ 0.29
SPTLC1-207ENST00000488921 ARHGEF6Q15052 776 aa16.85■□□□□ 0.29
SPTLC1-207ENST00000488921 CERS3Q8IU89 383 aa16.85■□□□□ 0.29
SPTLC1-207ENST00000488921 AATFQ9NY61 560 aaKnown RBP eCLIP16.85■□□□□ 0.29
SPTLC1-207ENST00000488921 TRIM17Q9Y577 477 aa16.85■□□□□ 0.29
SPTLC1-207ENST00000488921 MYH1P12882 1939 aa16.85■□□□□ 0.29
SPTLC1-207ENST00000488921 PHF20L1A8MW92 1017 aa16.84■□□□□ 0.29
SPTLC1-207ENST00000488921 BTBD19C9JJ37 291 aa16.84■□□□□ 0.29
SPTLC1-207ENST00000488921 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
SPTLC1-207ENST00000488921 PPP4CP60510 307 aa16.84■□□□□ 0.29
SPTLC1-207ENST00000488921 SH3RF3Q8TEJ3 882 aaPredicted RBP16.84■□□□□ 0.29
SPTLC1-207ENST00000488921 IL1RAPL2Q9NP60 686 aa16.84■□□□□ 0.29
SPTLC1-207ENST00000488921 CXCL11O14625 94 aa16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 IFIT2P09913 472 aaKnown RBP16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 RGS19P49795 217 aa16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 OTOP1Q7RTM1 612 aa16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 ANKRD23Q86SG2 305 aa16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 CD99L2Q8TCZ2 262 aa16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 DHX36Q9H2U1 1008 aaKnown RBP16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.83■□□□□ 0.283e-6■■■■■ 31.2
SPTLC1-207ENST00000488921 PIH1D3Q9NQM4 214 aaKnown RBP16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 HERC5Q9UII4 1024 aaKnown RBP16.83■□□□□ 0.28
SPTLC1-207ENST00000488921 MYH7P12883 1935 aa16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 TLR2O60603 784 aa16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 PTPRAP18433 802 aa16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 MAP3K12Q12852 859 aa16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 TTF1Q15361 905 aaPredicted RBP16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 SIRT2Q8IXJ6 389 aa16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 LOC285556D6RIA3 1793 aa16.82■□□□□ 0.28
SPTLC1-207ENST00000488921 FLT1P17948 1338 aa16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 APBB1O00213 710 aa16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 CYP7A1P22680 504 aa16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 MLLT1Q03111 559 aaPredicted RBP16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 C20orf194Q5TEA3 1177 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms