RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 POLRMTO00411 1230 aaKnown RBP7.82□□□□□ -1.16
CDHR3-213ENST00000488386 F11P03951 625 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 IGFBP4P22692 258 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 BRCA1P38398 1863 aaKnown RBP7.82□□□□□ -1.16
CDHR3-213ENST00000488386 NFIXQ14938 502 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 NPAS3Q8IXF0 933 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 CCDC146Q8IYE0 955 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 GPR161Q8N6U8 529 aaKnown RBP7.82□□□□□ -1.16
CDHR3-213ENST00000488386 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 RTF1Q92541 710 aaKnown RBP7.82□□□□□ -1.16
CDHR3-213ENST00000488386 CLP1Q92989 425 aaKnown RBP7.82□□□□□ -1.16
CDHR3-213ENST00000488386 FMNL2Q96PY5 1086 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 PLEKHF1Q96S99 279 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 USP16Q9Y5T5 823 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 CARMIL3Q8ND23 1372 aa7.82□□□□□ -1.16
CDHR3-213ENST00000488386 ATP10DQ9P241 1426 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 CDC14CA4D256 554 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 GRIN3BO60391 1043 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 VSIG8P0DPA2 414 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 KCNA3P22001 575 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 TM4SF1P30408 202 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 EIF5P55010 431 aaKnown RBP7.81□□□□□ -1.16
CDHR3-213ENST00000488386 FKBP5Q13451 457 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-213ENST00000488386 TBC1D9BQ66K14 1250 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 VWA5B2Q8N398 1253 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 NARFQ9UHQ1 456 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 RRP7AQ9Y3A4 280 aaKnown RBP7.81□□□□□ -1.16
CDHR3-213ENST00000488386 HCN4Q9Y3Q4 1203 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 SCN7AQ01118 1682 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 KDM3BQ7LBC6 1761 aa7.81□□□□□ -1.16
CDHR3-213ENST00000488386 WFS1O76024 890 aa7.8□□□□□ -1.16
CDHR3-213ENST00000488386 STARD3NLO95772 234 aa7.8□□□□□ -1.16
CDHR3-213ENST00000488386 HIRAP54198 1017 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-213ENST00000488386 UBAP2LQ14157 1087 aaKnown RBP7.8□□□□□ -1.16
CDHR3-213ENST00000488386 CAPN12Q6ZSI9 719 aa7.8□□□□□ -1.16
CDHR3-213ENST00000488386 TRIM22Q8IYM9 498 aa7.8□□□□□ -1.16
CDHR3-213ENST00000488386 STAG2Q8N3U4 1231 aa7.8□□□□□ -1.16
CDHR3-213ENST00000488386 C7orf43Q8WVR3 580 aa7.8□□□□□ -1.16
CDHR3-213ENST00000488386 NANOS1Q8WY41 292 aaKnown RBP7.8□□□□□ -1.16
CDHR3-213ENST00000488386 PHACTR1Q9C0D0 580 aa7.8□□□□□ -1.16
CDHR3-213ENST00000488386 ZDHHC3Q9NYG2 299 aa7.8□□□□□ -1.16
CDHR3-213ENST00000488386 MAPK8IP3Q9UPT6 1336 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 BCORQ6W2J9 1755 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 CACNA1SQ13698 1873 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 ANKRD31Q8N7Z5 1873 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 NRXN2Q9P2S2 1712 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 SERPINB2P05120 415 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 SCNN1AP37088 669 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 TGFB2P61812 414 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 NFE2L2Q16236 605 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 TREML4Q6UXN2 200 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 ARHGAP27Q6ZUM4 889 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 NGEFQ8N5V2 710 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 CRISPLD1Q9H336 500 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 CXXC1Q9P0U4 656 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-213ENST00000488386 LAMB4A4D0S4 1761 aa7.79□□□□□ -1.16
CDHR3-213ENST00000488386 MYBBP1AQ9BQG0 1328 aaKnown RBP7.78□□□□□ -1.16
CDHR3-213ENST00000488386 COL11A2P13942 1736 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-213ENST00000488386 FAM177BA6PVY3 158 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 GPR25O00155 361 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 CAMTA2O94983 1202 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 NEFMP07197 916 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 SNRPA1P09661 255 aaKnown RBP7.78□□□□□ -1.16
CDHR3-213ENST00000488386 ATP2B4P23634 1241 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 RALBP1Q15311 655 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 TAF7Q15545 349 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-213ENST00000488386 ALDH16A1Q8IZ83 802 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 C1orf216Q8TAB5 229 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 GTPBP3Q969Y2 492 aaKnown RBP7.78□□□□□ -1.16
CDHR3-213ENST00000488386 ZIC5Q96T25 663 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 MKNK1Q9BUB5 465 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 NUCKS1Q9H1E3 243 aaKnown RBP7.78□□□□□ -1.16
CDHR3-213ENST00000488386 ARFGEF1Q9Y6D6 1849 aa7.78□□□□□ -1.16
CDHR3-213ENST00000488386 ADCY9O60503 1353 aa7.77□□□□□ -1.17
CDHR3-213ENST00000488386 A0A1W2PNR3 127 aa7.77□□□□□ -1.17
CDHR3-213ENST00000488386 IL6STP40189 918 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-213ENST00000488386 RIPK4P57078 832 aa7.77□□□□□ -1.17
CDHR3-213ENST00000488386 KRT76Q01546 638 aa7.77□□□□□ -1.17
CDHR3-213ENST00000488386 RASSF7Q02833 373 aa7.77□□□□□ -1.17
CDHR3-213ENST00000488386 CCDC184Q52MB2 194 aa7.77□□□□□ -1.17
CDHR3-213ENST00000488386 PIM2Q9P1W9 311 aa7.77□□□□□ -1.17
CDHR3-213ENST00000488386 HCN2Q9UL51 889 aa7.77□□□□□ -1.17
CDHR3-213ENST00000488386 DLEC1Q9Y238 1755 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 A0A087WZG4 1122 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 HTATSF1O43719 755 aaKnown RBP7.76□□□□□ -1.17
CDHR3-213ENST00000488386 ANXA1P04083 346 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 MYL6BP14649 208 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 GMPRP36959 345 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 EIF4A1P60842 406 aaKnown RBP7.76□□□□□ -1.17
CDHR3-213ENST00000488386 GAS6Q14393 721 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 HLFQ16534 295 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 KRT24Q2M2I5 525 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 DALRD3Q5D0E6 543 aaKnown RBP7.76□□□□□ -1.17
CDHR3-213ENST00000488386 ARSJQ5FYB0 599 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-213ENST00000488386 RNFT1Q5M7Z0 435 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 PRR5LQ6MZQ0 368 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 SV2AQ7L0J3 742 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 C2CD5Q86YS7 1000 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 RHPN1Q8TCX5 695 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 IRF7Q92985 503 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms