RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PRKG1Q13976 671 aa18.92■□□□□ 0.62
C9orf3-219ENST00000488186 NBPF12Q5TAG4 269 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-219ENST00000488186 MAPKAPK5Q8IW41 473 aa18.92■□□□□ 0.62
C9orf3-219ENST00000488186 JMYQ8N9B5 988 aa18.92■□□□□ 0.62
C9orf3-219ENST00000488186 DDRGK1Q96HY6 314 aa18.92■□□□□ 0.62
C9orf3-219ENST00000488186 RIOK1Q9BRS2 568 aaKnown RBP18.92■□□□□ 0.62
C9orf3-219ENST00000488186 PUS7LQ9H0K6 701 aaKnown RBP18.92■□□□□ 0.62
C9orf3-219ENST00000488186 GBA2Q9HCG7 927 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-219ENST00000488186 DIAPH3Q9NSV4 1193 aa18.92■□□□□ 0.62
C9orf3-219ENST00000488186 ABT1Q9ULW3 272 aaKnown RBP18.92■□□□□ 0.62
C9orf3-219ENST00000488186 PAPPA2Q9BXP8 1791 aa18.91■□□□□ 0.62
C9orf3-219ENST00000488186 UNCXA6NJT0 531 aa18.91■□□□□ 0.62
C9orf3-219ENST00000488186 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
C9orf3-219ENST00000488186 DEFB115Q30KQ5 88 aa18.91■□□□□ 0.62
C9orf3-219ENST00000488186 LCORLQ8N3X6 602 aa18.91■□□□□ 0.62
C9orf3-219ENST00000488186 DDX4Q9NQI0 724 aaKnown RBP18.91■□□□□ 0.62
C9orf3-219ENST00000488186 GSPT1P15170 499 aaKnown RBP18.9■□□□□ 0.62
C9orf3-219ENST00000488186 SDSP20132 328 aa18.9■□□□□ 0.62
C9orf3-219ENST00000488186 HTRA3P83110 453 aa18.9■□□□□ 0.62
C9orf3-219ENST00000488186 DCAF15Q66K64 600 aa18.9■□□□□ 0.62
C9orf3-219ENST00000488186 ARMC9Q7Z3E5 817 aa18.9■□□□□ 0.62
C9orf3-219ENST00000488186 SKAP1Q86WV1 359 aa18.9■□□□□ 0.62
C9orf3-219ENST00000488186 ZFPM1Q8IX07 1006 aa18.9■□□□□ 0.62
C9orf3-219ENST00000488186 OSBP2Q969R2 916 aa18.9■□□□□ 0.62
C9orf3-219ENST00000488186 OSBPL5Q9H0X9 879 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-219ENST00000488186 SLC4A4Q9Y6R1 1079 aa18.9■□□□□ 0.62
C9orf3-219ENST00000488186 APPP05067 770 aa18.89■□□□□ 0.61
C9orf3-219ENST00000488186 GNAT2P19087 354 aa18.89■□□□□ 0.61
C9orf3-219ENST00000488186 ZMYM1Q5SVZ6 1142 aa18.89■□□□□ 0.61
C9orf3-219ENST00000488186 TEPSINQ96N21 525 aa18.89■□□□□ 0.61
C9orf3-219ENST00000488186 CSRNP1Q96S65 589 aa18.89■□□□□ 0.61
C9orf3-219ENST00000488186 TRIM34Q9BYJ4 488 aa18.89■□□□□ 0.61
C9orf3-219ENST00000488186 DHX36Q9H2U1 1008 aaKnown RBP18.89■□□□□ 0.61
C9orf3-219ENST00000488186 HELLSQ9NRZ9 838 aa18.89■□□□□ 0.61
C9orf3-219ENST00000488186 SAP30BPQ9UHR5 308 aaKnown RBP18.89■□□□□ 0.61
C9orf3-219ENST00000488186 RPAP1Q9BWH6 1393 aaPredicted RBP18.89■□□□□ 0.61
C9orf3-219ENST00000488186 MYH7P12883 1935 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 GPAA1O43292 621 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 POLR3DP05423 398 aaPredicted RBP18.88■□□□□ 0.61
C9orf3-219ENST00000488186 HLA-DOAP06340 250 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 ECE1P42892 770 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 IREB2P48200 963 aaKnown RBP18.88■□□□□ 0.61
C9orf3-219ENST00000488186 MAP3K11Q16584 847 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 STRBPQ96SI9 672 aaKnown RBP18.88■□□□□ 0.61
C9orf3-219ENST00000488186 ATP8A2Q9NTI2 1148 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
C9orf3-219ENST00000488186 FLT1P17948 1338 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 RFX7Q2KHR2 1363 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 PCNTO95613 3336 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 AK9Q5TCS8 1911 aa18.88■□□□□ 0.61
C9orf3-219ENST00000488186 M0R2C6 588 aa18.87■□□□□ 0.61
C9orf3-219ENST00000488186 MFAP1P55081 439 aaKnown RBP18.87■□□□□ 0.61
C9orf3-219ENST00000488186 HUNKP57058 714 aa18.87■□□□□ 0.61
C9orf3-219ENST00000488186 NMIQ13287 307 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-219ENST00000488186 MCMDC2Q4G0Z9 681 aa18.87■□□□□ 0.61
C9orf3-219ENST00000488186 CWC27Q6UX04 472 aaKnown RBP18.87■□□□□ 0.61
C9orf3-219ENST00000488186 PAXIP1Q6ZW49 1069 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-219ENST00000488186 MIGA2Q7L4E1 593 aa18.87■□□□□ 0.61
C9orf3-219ENST00000488186 SDR42E1Q8WUS8 393 aa18.87■□□□□ 0.61
C9orf3-219ENST00000488186 SEC62Q99442 399 aaKnown RBP18.87■□□□□ 0.61
C9orf3-219ENST00000488186 MCM9Q9NXL9 1143 aa18.87■□□□□ 0.61
C9orf3-219ENST00000488186 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-219ENST00000488186 DDTLA6NHG4 134 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-219ENST00000488186 PRKAB2O43741 272 aa18.86■□□□□ 0.61
C9orf3-219ENST00000488186 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
C9orf3-219ENST00000488186 CDAN1Q8IWY9 1227 aa18.86■□□□□ 0.61
C9orf3-219ENST00000488186 CRACR2BQ8N4Y2 399 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-219ENST00000488186 FAM227BQ96M60 508 aa18.86■□□□□ 0.61
C9orf3-219ENST00000488186 NACAP1Q9BZK3 213 aa18.86■□□□□ 0.61
C9orf3-219ENST00000488186 PI4KBQ9UBF8 816 aa18.86■□□□□ 0.61
C9orf3-219ENST00000488186 PALD1Q9ULE6 856 aa18.86■□□□□ 0.61
C9orf3-219ENST00000488186 PATL2C9JE40 543 aaKnown RBP18.85■□□□□ 0.61
C9orf3-219ENST00000488186 UBE2Q2LH0YL09 131 aa18.85■□□□□ 0.61
C9orf3-219ENST00000488186 RUFY2Q8WXA3 655 aa18.85■□□□□ 0.61
C9orf3-219ENST00000488186 CCDC102AQ96A19 550 aa18.85■□□□□ 0.61
C9orf3-219ENST00000488186 ZNF341Q9BYN7 854 aa18.85■□□□□ 0.61
C9orf3-219ENST00000488186 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.85■□□□□ 0.61
C9orf3-219ENST00000488186 DCP1AQ9NPI6 582 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-219ENST00000488186 A0A0D9SFI3 127 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 USP2O75604 605 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-219ENST00000488186 MAP2K2P36507 400 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 VEGFBP49765 207 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 SLC4A8Q2Y0W8 1093 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 LDLRAD1Q5T700 205 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 CCDC129Q6ZRS4 1044 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 MOB2Q70IA6 237 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 SH3BP5LQ7L8J4 393 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 MKRN1Q9UHC7 482 aaKnown RBP18.84■□□□□ 0.61
C9orf3-219ENST00000488186 FZD1Q9UP38 647 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 THSD7BQ9C0I4 1608 aa18.84■□□□□ 0.61
C9orf3-219ENST00000488186 WDR33Q9C0J8 1336 aaKnown RBP18.83■□□□□ 0.61
C9orf3-219ENST00000488186 TDO2P48775 406 aa18.83■□□□□ 0.6
C9orf3-219ENST00000488186 RGMBQ6NW40 437 aa18.83■□□□□ 0.6
C9orf3-219ENST00000488186 CASC1Q6TDU7 716 aa18.83■□□□□ 0.6
C9orf3-219ENST00000488186 FOXP4Q8IVH2 680 aaPredicted RBP18.83■□□□□ 0.6
C9orf3-219ENST00000488186 GTF3C3Q9Y5Q9 886 aa18.83■□□□□ 0.6
C9orf3-219ENST00000488186 ATRNL1Q5VV63 1379 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 ZNF157P51786 506 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms