RNA–Protein interactions for RNA: ENST00000488121.1

COL1A2-209, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 380 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-209ENST00000488121 POTECB2RU33 542 aa13.65□□□□□ -0.22
COL1A2-209ENST00000488121 TCP10L2B9ZVM9 353 aa13.65□□□□□ -0.22
COL1A2-209ENST00000488121 WDHD1O75717 1129 aaPredicted RBP13.65□□□□□ -0.22
COL1A2-209ENST00000488121 TCP10Q12799 353 aa13.65□□□□□ -0.22
COL1A2-209ENST00000488121 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
COL1A2-209ENST00000488121 AMOTL1Q8IY63 956 aa13.65□□□□□ -0.22
COL1A2-209ENST00000488121 TRPM4Q8TD43 1214 aa13.65□□□□□ -0.22
COL1A2-209ENST00000488121 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
COL1A2-209ENST00000488121 MCM9Q9NXL9 1143 aa13.65□□□□□ -0.22
COL1A2-209ENST00000488121 RBM8AQ9Y5S9 174 aaKnown RBP13.65□□□□□ -0.22
COL1A2-209ENST00000488121 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 USP17L12C9JPN9 530 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 USP17L21D6R901 530 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 ZNF213O14771 459 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 FOXP2O15409 715 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 ENTPD3O75355 529 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 POLR3DP05423 398 aaPredicted RBP13.64□□□□□ -0.23
COL1A2-209ENST00000488121 MCCP23508 829 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 TNNI2P48788 182 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 NFIAQ12857 509 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 ANGEL2Q5VTE6 544 aaKnown RBP13.64□□□□□ -0.23
COL1A2-209ENST00000488121 RNF20Q5VTR2 975 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 FKBP1CQ5VVH2 108 aa13.64□□□□□ -0.23
COL1A2-209ENST00000488121 ZNF526Q8TF50 670 aaPredicted RBP13.64□□□□□ -0.23
COL1A2-209ENST00000488121 MKRN1Q9UHC7 482 aaKnown RBP13.64□□□□□ -0.23
COL1A2-209ENST00000488121 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
COL1A2-209ENST00000488121 ADAMTSL1Q8N6G6 1762 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 TNFAIP1Q13829 316 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 IMMTQ16891 758 aaKnown RBP13.63□□□□□ -0.23
COL1A2-209ENST00000488121 SBK1Q52WX2 424 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
COL1A2-209ENST00000488121 CTR9Q6PD62 1173 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 TTC6Q86TZ1 520 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 ZSCAN29Q8IWY8 852 aaPredicted RBP13.63□□□□□ -0.23
COL1A2-209ENST00000488121 FAM151AQ8WW52 585 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 DCPSQ96C86 337 aaKnown RBP13.63□□□□□ -0.23
COL1A2-209ENST00000488121 C22orf23Q9BZE7 217 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 EPB41L4AQ9HCS5 686 aaPredicted RBP13.63□□□□□ -0.23
COL1A2-209ENST00000488121 DDX4Q9NQI0 724 aaKnown RBP13.63□□□□□ -0.23
COL1A2-209ENST00000488121 FAM198AQ9UFP1 575 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 PALD1Q9ULE6 856 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 ASTN2O75129 1339 aaPredicted RBP13.63□□□□□ -0.23
COL1A2-209ENST00000488121 FLT1P17948 1338 aa13.63□□□□□ -0.23
COL1A2-209ENST00000488121 ZKSCAN1P17029 563 aaPredicted RBP13.62□□□□□ -0.23
COL1A2-209ENST00000488121 HSPA4P34932 840 aa13.62□□□□□ -0.23
COL1A2-209ENST00000488121 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
COL1A2-209ENST00000488121 FAM83AQ86UY5 434 aa13.62□□□□□ -0.23
COL1A2-209ENST00000488121 APOBEC3FQ8IUX4 373 aaKnown RBP13.62□□□□□ -0.23
COL1A2-209ENST00000488121 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
COL1A2-209ENST00000488121 ZC3H15Q8WU90 426 aaKnown RBP13.62□□□□□ -0.23
COL1A2-209ENST00000488121 OSBPL5Q9H0X9 879 aaPredicted RBP13.62□□□□□ -0.23
COL1A2-209ENST00000488121 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
COL1A2-209ENST00000488121 ARPP21Q9UBL0 812 aaPredicted RBP13.62□□□□□ -0.23
COL1A2-209ENST00000488121 SCN4AP35499 1836 aa13.62□□□□□ -0.23
COL1A2-209ENST00000488121 ZMYM6O95789 1325 aa13.62□□□□□ -0.23
COL1A2-209ENST00000488121 SLC27A2O14975 620 aa13.61□□□□□ -0.23
COL1A2-209ENST00000488121 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
COL1A2-209ENST00000488121 HAND2P61296 217 aa13.61□□□□□ -0.23
COL1A2-209ENST00000488121 PPARAQ07869 468 aa13.61□□□□□ -0.23
COL1A2-209ENST00000488121 RASA3Q14644 834 aa13.61□□□□□ -0.23
COL1A2-209ENST00000488121 C12orf60Q5U649 245 aa13.61□□□□□ -0.23
COL1A2-209ENST00000488121 FOXP4Q8IVH2 680 aaPredicted RBP13.61□□□□□ -0.23
COL1A2-209ENST00000488121 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
COL1A2-209ENST00000488121 WDR90Q96KV7 1748 aa13.61□□□□□ -0.23
COL1A2-209ENST00000488121 ECM29Q5VYK3 1845 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 CYP2D7A0A087X1C5 515 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 HLA-DOAP06340 250 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 CYP21A2P08686 494 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 CYP2D6P10635 497 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 DEFB129Q9H1M3 183 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 NMRK2Q9NPI5 230 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 GGA3Q9NZ52 723 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 SCAF8Q9UPN6 1271 aaKnown RBP13.6□□□□□ -0.23
COL1A2-209ENST00000488121 PITPNM2Q9BZ72 1349 aa13.6□□□□□ -0.23
COL1A2-209ENST00000488121 DDTLA6NHG4 134 aaPredicted RBP13.59□□□□□ -0.23
COL1A2-209ENST00000488121 PLCD1P51178 756 aa13.59□□□□□ -0.23
COL1A2-209ENST00000488121 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
COL1A2-209ENST00000488121 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
COL1A2-209ENST00000488121 SULF1Q8IWU6 871 aa13.59□□□□□ -0.23
COL1A2-209ENST00000488121 STK11IPQ8N1F8 1099 aa13.59□□□□□ -0.23
COL1A2-209ENST00000488121 KCNB2Q92953 911 aa13.59□□□□□ -0.23
COL1A2-209ENST00000488121 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
COL1A2-209ENST00000488121 ANAPC4Q9UJX5 808 aa13.59□□□□□ -0.23
COL1A2-209ENST00000488121 CNTNAP1P78357 1384 aa13.58□□□□□ -0.23
COL1A2-209ENST00000488121 RBM25P49756 843 aaKnown RBP13.58□□□□□ -0.24
COL1A2-209ENST00000488121 PDE4BQ07343 736 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 KRT32Q14532 448 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 TSGA10IPQ3SY00 556 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 AKNAD1Q5T1N1 836 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 SH3BP5LQ7L8J4 393 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 USP48Q86UV5 1035 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
COL1A2-209ENST00000488121 CSRNP1Q96S65 589 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.24
COL1A2-209ENST00000488121 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms