RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 SOX4Q06945 474 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-217ENST00000487825 AKAP4Q5JQC9 854 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 DTHD1Q6ZMT9 781 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 ZDHHC13Q8IUH4 622 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 C2CD4AQ8NCU7 369 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-217ENST00000487825 FBLIM1Q8WUP2 373 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 DBNDD2Q9BQY9 259 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 RAD18Q9NS91 495 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 CARMIL1Q5VZK9 1371 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 UHRF1BP1Q6BDS2 1440 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 AKNAQ7Z591 1439 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 PTPN12Q05209 780 aaKnown RBP8.04□□□□□ -1.12
BRCA1-217ENST00000487825 FAAP100Q0VG06 881 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.04□□□□□ -1.12
BRCA1-217ENST00000487825 CDPF1Q6NVV7 123 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 MFSD14AQ96MC6 490 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 BCO2Q9BYV7 579 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 PCMTD2Q9NV79 361 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 PPP4R2Q9NY27 417 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 C3P01024 1663 aa8.04□□□□□ -1.12
BRCA1-217ENST00000487825 ADH5P11766 374 aa8.03□□□□□ -1.12
BRCA1-217ENST00000487825 MAPK8P45983 427 aa8.03□□□□□ -1.12
BRCA1-217ENST00000487825 PDE3AQ14432 1141 aa8.03□□□□□ -1.12
BRCA1-217ENST00000487825 NFKBIBQ15653 356 aa8.03□□□□□ -1.12
BRCA1-217ENST00000487825 ENOX2Q16206 610 aaKnown RBP8.03□□□□□ -1.12
BRCA1-217ENST00000487825 FBXL6Q8N531 539 aa8.03□□□□□ -1.12
BRCA1-217ENST00000487825 SHKBP1Q8TBC3 707 aa8.03□□□□□ -1.12
BRCA1-217ENST00000487825 ZC3H12CQ9C0D7 883 aaKnown RBP8.03□□□□□ -1.12
BRCA1-217ENST00000487825 ZFYVE1Q9HBF4 777 aa8.03□□□□□ -1.12
BRCA1-217ENST00000487825 FHOD3Q2V2M9 1422 aa8.03□□□□□ -1.12
BRCA1-217ENST00000487825 DENND4BO75064 1496 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-217ENST00000487825 FAM95CA0A1B0GW59 222 aa8.02□□□□□ -1.13
BRCA1-217ENST00000487825 WDR64B1ANS9 1081 aa8.02□□□□□ -1.13
BRCA1-217ENST00000487825 RPS26P11Q5JNZ5 115 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-217ENST00000487825 HP1BP3Q5SSJ5 553 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-217ENST00000487825 NXPE4Q6UWF7 544 aa8.02□□□□□ -1.13
BRCA1-217ENST00000487825 DYMQ7RTS9 669 aa8.02□□□□□ -1.13
BRCA1-217ENST00000487825 ZSCAN29Q8IWY8 852 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-217ENST00000487825 SETDB2Q96T68 719 aa8.02□□□□□ -1.13
BRCA1-217ENST00000487825 TRAIPQ9BWF2 469 aa8.02□□□□□ -1.13
BRCA1-217ENST00000487825 ACTL7BQ9Y614 415 aa8.02□□□□□ -1.13
BRCA1-217ENST00000487825 COBLO75128 1261 aa8.01□□□□□ -1.13
BRCA1-217ENST00000487825 MED26O95402 600 aa8.01□□□□□ -1.13
BRCA1-217ENST00000487825 RAB6AP20340 208 aa8.01□□□□□ -1.13
BRCA1-217ENST00000487825 AP3B2Q13367 1082 aa8.01□□□□□ -1.13
BRCA1-217ENST00000487825 GPN3Q9UHW5 284 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-217ENST00000487825 AP4E1Q9UPM8 1137 aa8.01□□□□□ -1.13
BRCA1-217ENST00000487825 AKAP2Q9Y2D5 859 aa8.01□□□□□ -1.13
BRCA1-217ENST00000487825 MAGI2Q86UL8 1455 aa8□□□□□ -1.13
BRCA1-217ENST00000487825 HECW1Q76N89 1606 aa8□□□□□ -1.13
BRCA1-217ENST00000487825 CD97P48960 835 aa8□□□□□ -1.13
BRCA1-217ENST00000487825 PAOXQ6QHF9 649 aa8□□□□□ -1.13
BRCA1-217ENST00000487825 ASB16Q96NS5 453 aa8□□□□□ -1.13
BRCA1-217ENST00000487825 WWC3Q9ULE0 1092 aa8□□□□□ -1.13
BRCA1-217ENST00000487825 NCOA1Q15788 1441 aa8□□□□□ -1.13
BRCA1-217ENST00000487825 PRR19A6NJB7 356 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 AOC2O75106 756 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 LIG1P18858 919 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 SUPT6HQ7KZ85 1726 aaKnown RBP7.99□□□□□ -1.13
BRCA1-217ENST00000487825 SHISA5Q8N114 240 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 YIPF2Q9BWQ6 316 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 CCDC86Q9H6F5 360 aaKnown RBP7.99□□□□□ -1.13
BRCA1-217ENST00000487825 FAM105AQ9NUU6 356 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 TMEM39AQ9NV64 488 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 ATP10BO94823 1461 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 GOLGA3Q08378 1498 aa7.99□□□□□ -1.13
BRCA1-217ENST00000487825 NFICP08651 508 aa7.98□□□□□ -1.13
BRCA1-217ENST00000487825 GRIK1P39086 918 aa7.98□□□□□ -1.13
BRCA1-217ENST00000487825 ASPAP45381 313 aa7.98□□□□□ -1.13
BRCA1-217ENST00000487825 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
BRCA1-217ENST00000487825 WDR89Q96FK6 387 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-217ENST00000487825 WDR18Q9BV38 432 aa7.98□□□□□ -1.13
BRCA1-217ENST00000487825 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
BRCA1-217ENST00000487825 ATG3Q9NT62 314 aa7.98□□□□□ -1.13
BRCA1-217ENST00000487825 F13BP05160 661 aa7.97□□□□□ -1.13
BRCA1-217ENST00000487825 XRCC5P13010 732 aaKnown RBP7.97□□□□□ -1.13
BRCA1-217ENST00000487825 PPP2R3AQ06190 1150 aa7.97□□□□□ -1.13
BRCA1-217ENST00000487825 PPP1R9AQ9ULJ8 1098 aa7.97□□□□□ -1.13
BRCA1-217ENST00000487825 CAMSAP1Q5T5Y3 1602 aa7.96□□□□□ -1.13
BRCA1-217ENST00000487825 GSTP1P09211 210 aaKnown RBP7.96□□□□□ -1.14
BRCA1-217ENST00000487825 HOXA10P31260 410 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-217ENST00000487825 HSPA1LP34931 641 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 ADMP35318 185 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 MLECQ14165 292 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 GIMAP7Q8NHV1 300 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-217ENST00000487825 KCNB2Q92953 911 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 TBC1D32Q96NH3 1257 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 OSBPL1AQ9BXW6 950 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 SEMA6CQ9H3T2 930 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 LGR6Q9HBX8 967 aa7.96□□□□□ -1.14
BRCA1-217ENST00000487825 ZNF142P52746 1687 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-217ENST00000487825 C9orf84Q5VXU9 1444 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 RAPGEF2Q9Y4G8 1499 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-217ENST00000487825 ZNF862O60290 1169 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 CEBPAP49715 358 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-217ENST00000487825 INTS5Q6P9B9 1019 aaKnown RBP7.95□□□□□ -1.14
BRCA1-217ENST00000487825 AEBP1Q8IUX7 1158 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 C3orf58Q8NDZ4 430 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms