RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 SPDYE2BA6NHP3 402 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 USP17L12C9JPN9 530 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 USP17L21D6R901 530 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 E7EWF7 191 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 WDHD1O75717 1129 aaPredicted RBP9.51□□□□□ -0.89
RBM28-206ENST00000487602 SPDYE6P0CI01 402 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 ZNF280AP59817 542 aaPredicted RBP9.51□□□□□ -0.89
RBM28-206ENST00000487602 PPARAQ07869 468 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 STOX1Q6ZVD7 989 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 MAPKAPK5Q8IW41 473 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 GPC2Q8N158 579 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 PRMT6Q96LA8 375 aaPredicted RBP9.51□□□□□ -0.89
RBM28-206ENST00000487602 NEK1Q96PY6 1258 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 IDI2Q9BXS1 227 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 NBPF3Q9H094 633 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 MCM9Q9NXL9 1143 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 ARPP21Q9UBL0 812 aaPredicted RBP9.51□□□□□ -0.89
RBM28-206ENST00000487602 CNOT7Q9UIV1 285 aaKnown RBP9.51□□□□□ -0.89
RBM28-206ENST00000487602 ANAPC4Q9UJX5 808 aa9.51□□□□□ -0.89
RBM28-206ENST00000487602 SHTN1A0MZ66 631 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 MINDY4BA8MYZ0 360 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 CASTP20810 708 aaKnown RBP9.5□□□□□ -0.89
RBM28-206ENST00000487602 NEK4P51957 841 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 C12orf60Q5U649 245 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 RUFY3Q7L099 469 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 TBC1D10CQ8IV04 446 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 SNX21Q969T3 373 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 TDRD3Q9H7E2 651 aaKnown RBP9.5□□□□□ -0.89
RBM28-206ENST00000487602 MYOZ2Q9NPC6 264 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 DDX4Q9NQI0 724 aaKnown RBP9.5□□□□□ -0.89
RBM28-206ENST00000487602 CYP46A1Q9Y6A2 500 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 TACC3Q9Y6A5 838 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 FLT1P17948 1338 aa9.5□□□□□ -0.89
RBM28-206ENST00000487602 CYP2D7A0A087X1C5 515 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 H7C1D1 291 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 ST18O60284 1047 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 POLR3DP05423 398 aaPredicted RBP9.49□□□□□ -0.89
RBM28-206ENST00000487602 HMGB1P09429 215 aaKnown RBP9.49□□□□□ -0.89
RBM28-206ENST00000487602 FGRP09769 529 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 CYP2D6P10635 497 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 CPA1P15085 419 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 RPS6KB1P23443 525 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 NFIAQ12857 509 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 BLOC1S2Q6QNY1 142 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 MFSD6Q6ZSS7 791 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 AMOTL1Q8IY63 956 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 NCOA7Q8NI08 942 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 STAG1Q8WVM7 1258 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 UPF3BQ9BZI7 483 aaKnown RBP9.49□□□□□ -0.89
RBM28-206ENST00000487602 ALDH8A1Q9H2A2 487 aaPredicted RBP9.49□□□□□ -0.89
RBM28-206ENST00000487602 RNF41Q9H4P4 317 aaPredicted RBP9.49□□□□□ -0.89
RBM28-206ENST00000487602 PDRG1Q9NUG6 133 aa9.49□□□□□ -0.89
RBM28-206ENST00000487602 ZNF70Q9UC06 446 aaPredicted RBP9.49□□□□□ -0.89
RBM28-206ENST00000487602 SAP30BPQ9UHR5 308 aaKnown RBP9.49□□□□□ -0.89
RBM28-206ENST00000487602 SMIM22K7EJ46 135 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 WNT10BO00744 389 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 ENTPD3O75355 529 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 DDNO94850 711 aaPredicted RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 SLC3A2P08195 630 aaKnown RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 PCP11498 1178 aaKnown RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 EXOSC10Q01780 885 aaKnown RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 TRDNQ13061 729 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 PICALMQ13492 652 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 BECN1Q14457 450 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 RBM26Q5T8P6 1007 aaKnown RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 FKBP1CQ5VVH2 108 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 DPY19L2Q6NUT2 758 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 DHX32Q7L7V1 743 aaKnown RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 SAMD7Q7Z3H4 446 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 TTC6Q86TZ1 520 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 MB21D2Q8IYB1 491 aaPredicted RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 TTC14Q96N46 770 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 IPO9Q96P70 1041 aaKnown RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 KRT23Q9C075 422 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 OSBPL5Q9H0X9 879 aaPredicted RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 INCENPQ9NQS7 918 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 GPRC5DQ9NZD1 345 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 TMOD2Q9NZR1 351 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 FAM198AQ9UFP1 575 aa9.48□□□□□ -0.89
RBM28-206ENST00000487602 ZC3H4Q9UPT8 1303 aaKnown RBP9.48□□□□□ -0.89
RBM28-206ENST00000487602 ADAMTSL1Q8N6G6 1762 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 MYO1BO43795 1136 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 ORC4O43929 436 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
RBM28-206ENST00000487602 EPS15P42566 896 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 MCM2P49736 904 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 PLCD1P51178 756 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 CACNB3P54284 484 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 EVX2Q03828 476 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 PDE4BQ07343 736 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 NBPF9Q3BBW0 867 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 RALYLQ86SE5 291 aaKnown RBP9.47□□□□□ -0.89
RBM28-206ENST00000487602 HSCBQ8IWL3 235 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 ZFPM1Q8IX07 1006 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms