RNA–Protein interactions for RNA: ENST00000487455.1

REPIN1-212, Transcript of replication initiator 1, humanhuman

TSL 4

Gene REPIN1, Length 464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-212ENST00000487455 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
REPIN1-212ENST00000487455 COL25A1Q9BXS0 654 aaPredicted RBP11.75□□□□□ -0.53
REPIN1-212ENST00000487455 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.75□□□□□ -0.53
REPIN1-212ENST00000487455 FAM198AQ9UFP1 575 aa11.75□□□□□ -0.53
REPIN1-212ENST00000487455 PDE8BO95263 885 aa11.74□□□□□ -0.53
REPIN1-212ENST00000487455 MAGEA10P43363 369 aaPredicted RBP11.74□□□□□ -0.53
REPIN1-212ENST00000487455 EXOSC9Q06265 439 aaKnown RBP11.74□□□□□ -0.53
REPIN1-212ENST00000487455 LRIT3Q3SXY7 679 aa11.74□□□□□ -0.53
REPIN1-212ENST00000487455 COA7Q96BR5 231 aa11.74□□□□□ -0.53
REPIN1-212ENST00000487455 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
REPIN1-212ENST00000487455 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
REPIN1-212ENST00000487455 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
REPIN1-212ENST00000487455 PICK1Q9NRD5 415 aa11.74□□□□□ -0.53
REPIN1-212ENST00000487455 DOCK2Q92608 1830 aa11.74□□□□□ -0.53
REPIN1-212ENST00000487455 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 NBPF7P0C2Y1 421 aaPredicted RBP11.73□□□□□ -0.53
REPIN1-212ENST00000487455 PTPRAP18433 802 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 ZEB1P37275 1124 aaPredicted RBP11.73□□□□□ -0.53
REPIN1-212ENST00000487455 DDX60LQ5H9U9 1706 aaKnown RBP11.73□□□□□ -0.53
REPIN1-212ENST00000487455 SCYL3Q8IZE3 742 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 TDHQ8IZJ6 230 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 ANKRD13CQ8N6S4 541 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 ANKLE1Q8NAG6 615 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 KLHDC4Q8TBB5 520 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 WDR66Q8TBY9 1149 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 NBPF3Q9H094 633 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 USP40Q9NVE5 1235 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 SLC45A1Q9Y2W3 748 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 AFG3L2Q9Y4W6 797 aa11.73□□□□□ -0.53
REPIN1-212ENST00000487455 ATRNL1Q5VV63 1379 aa11.72□□□□□ -0.53
REPIN1-212ENST00000487455 TRIM75PA6NK02 468 aa11.72□□□□□ -0.53
REPIN1-212ENST00000487455 IFIT1P09914 478 aaKnown RBP11.72□□□□□ -0.53
REPIN1-212ENST00000487455 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
REPIN1-212ENST00000487455 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
REPIN1-212ENST00000487455 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.72□□□□□ -0.53
REPIN1-212ENST00000487455 LAMA2P24043 3122 aaKnown RBP11.72□□□□□ -0.53
REPIN1-212ENST00000487455 PHIPQ8WWQ0 1821 aa11.72□□□□□ -0.53
REPIN1-212ENST00000487455 VCANP13611 3396 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 KIF16BQ96L93 1317 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 HMGCRP04035 888 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 SLURP2P0DP57 97 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 FGFR2P21802 821 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 PRDX5P30044 214 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 RGS3P49796 1198 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 TRIM32Q13049 653 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 PUM3Q15397 648 aaKnown RBP11.71□□□□□ -0.53
REPIN1-212ENST00000487455 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.53
REPIN1-212ENST00000487455 CCDC84Q86UT8 332 aaPredicted RBP11.71□□□□□ -0.53
REPIN1-212ENST00000487455 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■□□□□ 10.5
REPIN1-212ENST00000487455 C11orf49Q9H6J7 331 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 LRRFIP2Q9Y608 721 aaKnown RBP11.71□□□□□ -0.53
REPIN1-212ENST00000487455 DOCK1Q14185 1865 aa11.71□□□□□ -0.53
REPIN1-212ENST00000487455 FAM110CQ1W6H9 321 aa11.7□□□□□ -0.54
REPIN1-212ENST00000487455 CCDC184Q52MB2 194 aa11.7□□□□□ -0.54
REPIN1-212ENST00000487455 TREML2Q5T2D2 321 aa11.7□□□□□ -0.54
REPIN1-212ENST00000487455 SH3BP5LQ7L8J4 393 aa11.7□□□□□ -0.54
REPIN1-212ENST00000487455 ZSCAN29Q8IWY8 852 aaPredicted RBP11.7□□□□□ -0.54
REPIN1-212ENST00000487455 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
REPIN1-212ENST00000487455 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
REPIN1-212ENST00000487455 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
REPIN1-212ENST00000487455 MYH2Q9UKX2 1941 aa11.7□□□□□ -0.54
REPIN1-212ENST00000487455 UTYO14607 1347 aa11.69□□□□□ -0.54
REPIN1-212ENST00000487455 RPTORQ8N122 1335 aa11.69□□□□□ -0.54
REPIN1-212ENST00000487455 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
REPIN1-212ENST00000487455 LDHBP07195 334 aaKnown RBP11.69□□□□□ -0.54
REPIN1-212ENST00000487455 SLC5A1P13866 664 aa11.69□□□□□ -0.54
REPIN1-212ENST00000487455 ENTPD3O75355 529 aa11.68□□□□□ -0.54
REPIN1-212ENST00000487455 LPIN2Q92539 896 aa11.68□□□□□ -0.54
REPIN1-212ENST00000487455 IDI2Q9BXS1 227 aa11.68□□□□□ -0.54
REPIN1-212ENST00000487455 GJD2Q9UKL4 321 aa11.68□□□□□ -0.54
REPIN1-212ENST00000487455 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
REPIN1-212ENST00000487455 OGDHLQ9ULD0 1010 aa11.68□□□□□ -0.54
REPIN1-212ENST00000487455 PFASO15067 1338 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 DDTLA6NHG4 134 aaPredicted RBP11.67□□□□□ -0.54
REPIN1-212ENST00000487455 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
REPIN1-212ENST00000487455 MAP3K10Q02779 954 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 PICALMQ13492 652 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 WDR63Q8IWG1 891 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 TRIB2Q92519 343 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 FAM161BQ96MY7 647 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 GUCD1Q96NT3 240 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
REPIN1-212ENST00000487455 DNAH12Q6ZR08 3092 aa11.66□□□□□ -0.54
REPIN1-212ENST00000487455 SPTBN5Q9NRC6 3674 aaKnown RBP11.66□□□□□ -0.54
REPIN1-212ENST00000487455 FAM196BA6NMK8 535 aa11.66□□□□□ -0.54
REPIN1-212ENST00000487455 EYA2O00167 538 aa11.66□□□□□ -0.54
REPIN1-212ENST00000487455 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
REPIN1-212ENST00000487455 CYP2B6P20813 491 aa11.66□□□□□ -0.54
REPIN1-212ENST00000487455 GCLCP48506 637 aaPredicted RBP11.66□□□□□ -0.54
REPIN1-212ENST00000487455 SPP2Q13103 211 aa11.66□□□□□ -0.54
REPIN1-212ENST00000487455 PROCA1Q8NCQ7 364 aaPredicted RBP11.66□□□□□ -0.54
REPIN1-212ENST00000487455 DDX4Q9NQI0 724 aaKnown RBP11.66□□□□□ -0.54
REPIN1-212ENST00000487455 GNL3LQ9NVN8 582 aaKnown RBP11.66□□□□□ -0.54
REPIN1-212ENST00000487455 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
REPIN1-212ENST00000487455 GAKO14976 1311 aa11.65□□□□□ -0.54
REPIN1-212ENST00000487455 SALL1Q9NSC2 1324 aa11.65□□□□□ -0.54
REPIN1-212ENST00000487455 LOC285556D6RIA3 1793 aa11.65□□□□□ -0.54
REPIN1-212ENST00000487455 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
REPIN1-212ENST00000487455 HMGCS2P54868 508 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms