RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 FLT1P17948 1338 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 RPAP1Q9BWH6 1393 aaPredicted RBP15.34■□□□□ 0.05
PRDM2-208ENST00000487453 ENTPD3O75355 529 aa15.33■□□□□ 0.04
PRDM2-208ENST00000487453 ITGBL1O95965 494 aaPredicted RBP15.33■□□□□ 0.04
PRDM2-208ENST00000487453 NF2P35240 595 aa15.33■□□□□ 0.04
PRDM2-208ENST00000487453 CWC27Q6UX04 472 aaKnown RBP15.33■□□□□ 0.04
PRDM2-208ENST00000487453 TICAM2Q86XR7 235 aa15.33■□□□□ 0.04
PRDM2-208ENST00000487453 SDR42E1Q8WUS8 393 aa15.33■□□□□ 0.04
PRDM2-208ENST00000487453 FAM151AQ8WW52 585 aa15.33■□□□□ 0.04
PRDM2-208ENST00000487453 OSBPL5Q9H0X9 879 aaPredicted RBP15.33■□□□□ 0.04
PRDM2-208ENST00000487453 SLC4A4Q9Y6R1 1079 aa15.33■□□□□ 0.04
PRDM2-208ENST00000487453 LAMB1P07942 1786 aa15.33■□□□□ 0.04
PRDM2-208ENST00000487453 MYH1P12882 1939 aa15.33■□□□□ 0.04
PRDM2-208ENST00000487453 SSC5DA1L4H1 1573 aa15.32■□□□□ 0.04
PRDM2-208ENST00000487453 SLC4A8Q2Y0W8 1093 aa15.32■□□□□ 0.04
PRDM2-208ENST00000487453 CCDC129Q6ZRS4 1044 aa15.32■□□□□ 0.04
PRDM2-208ENST00000487453 CDAN1Q8IWY9 1227 aa15.32■□□□□ 0.04
PRDM2-208ENST00000487453 DDRGK1Q96HY6 314 aa15.32■□□□□ 0.04
PRDM2-208ENST00000487453 HELLSQ9NRZ9 838 aa15.32■□□□□ 0.04
PRDM2-208ENST00000487453 SAP30BPQ9UHR5 308 aaKnown RBP15.32■□□□□ 0.04
PRDM2-208ENST00000487453 COL2A1P02458 1487 aaPredicted RBP15.32■□□□□ 0.04
PRDM2-208ENST00000487453 PRKAB2O43741 272 aa15.31■□□□□ 0.04
PRDM2-208ENST00000487453 CELF2O95319 508 aaKnown RBP15.31■□□□□ 0.04
PRDM2-208ENST00000487453 MCMDC2Q4G0Z9 681 aa15.31■□□□□ 0.04
PRDM2-208ENST00000487453 ZFPM1Q8IX07 1006 aa15.31■□□□□ 0.04
PRDM2-208ENST00000487453 CSRNP1Q96S65 589 aa15.31■□□□□ 0.04
PRDM2-208ENST00000487453 STRBPQ96SI9 672 aaKnown RBP15.31■□□□□ 0.04
PRDM2-208ENST00000487453 PASKQ96RG2 1323 aa15.31■□□□□ 0.04
PRDM2-208ENST00000487453 PAPPA2Q9BXP8 1791 aa15.31■□□□□ 0.04
PRDM2-208ENST00000487453 APPP05067 770 aa15.3■□□□□ 0.04
PRDM2-208ENST00000487453 GNAT2P19087 354 aa15.3■□□□□ 0.04
PRDM2-208ENST00000487453 CHMLP26374 656 aa15.3■□□□□ 0.04
PRDM2-208ENST00000487453 PRKG1Q13976 671 aa15.3■□□□□ 0.04
PRDM2-208ENST00000487453 TTLL12Q14166 644 aaPredicted RBP15.3■□□□□ 0.04
PRDM2-208ENST00000487453 SUPT20HL1Q3ZLR7 823 aa15.3■□□□□ 0.04
PRDM2-208ENST00000487453 NBPF12Q5TAG4 269 aaPredicted RBP15.3■□□□□ 0.04
PRDM2-208ENST00000487453 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
PRDM2-208ENST00000487453 TEPSINQ96N21 525 aa15.3■□□□□ 0.04
PRDM2-208ENST00000487453 BAZ2AQ9UIF9 1905 aaKnown RBP15.3■□□□□ 0.04
PRDM2-208ENST00000487453 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 ATRNL1Q5VV63 1379 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 DDTLA6NHG4 134 aaPredicted RBP15.29■□□□□ 0.04
PRDM2-208ENST00000487453 CDC45O75419 566 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
PRDM2-208ENST00000487453 TDO2P48775 406 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 MFAP1P55081 439 aaKnown RBP15.29■□□□□ 0.04
PRDM2-208ENST00000487453 CASC1Q6TDU7 716 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
PRDM2-208ENST00000487453 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 DCP1AQ9NPI6 582 aaPredicted RBP15.29■□□□□ 0.04
PRDM2-208ENST00000487453 ATP8A2Q9NTI2 1148 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 MCM9Q9NXL9 1143 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 PALD1Q9ULE6 856 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 OTOFQ9HC10 1997 aa15.29■□□□□ 0.04
PRDM2-208ENST00000487453 RAD50Q92878 1312 aa15.28■□□□□ 0.04
PRDM2-208ENST00000487453 HLA-DOAP06340 250 aa15.28■□□□□ 0.04
PRDM2-208ENST00000487453 C1QTNF8P60827 252 aa15.28■□□□□ 0.04
PRDM2-208ENST00000487453 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
PRDM2-208ENST00000487453 AMOTL1Q8IY63 956 aa15.28■□□□□ 0.04
PRDM2-208ENST00000487453 DHX36Q9H2U1 1008 aaKnown RBP15.28■□□□□ 0.04
PRDM2-208ENST00000487453 FZD1Q9UP38 647 aa15.28■□□□□ 0.04
PRDM2-208ENST00000487453 POLR3DP05423 398 aaPredicted RBP15.27■□□□□ 0.04
PRDM2-208ENST00000487453 CRACR2BQ8N4Y2 399 aaPredicted RBP15.27■□□□□ 0.04
PRDM2-208ENST00000487453 C2orf69Q8N8R5 385 aa15.27■□□□□ 0.04
PRDM2-208ENST00000487453 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.04
PRDM2-208ENST00000487453 NACAP1Q9BZK3 213 aa15.27■□□□□ 0.04
PRDM2-208ENST00000487453 GBA2Q9HCG7 927 aaPredicted RBP15.27■□□□□ 0.04
PRDM2-208ENST00000487453 EPB41L4AQ9HCS5 686 aaPredicted RBP15.27■□□□□ 0.04
PRDM2-208ENST00000487453 TMEM88BA6NKF7 163 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 GSG1L2A8MUP6 293 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 PPP1R12BO60237 982 aaPredicted RBP15.26■□□□□ 0.03
PRDM2-208ENST00000487453 APLP1P51693 650 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 VPS53Q5VIR6 699 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 CST9Q5W186 159 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 DCAF15Q66K64 600 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 MIGA2Q7L4E1 593 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 TTC6Q86TZ1 520 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 NAPBQ9H115 298 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 IL25Q9H293 177 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 ARPP21Q9UBL0 812 aaPredicted RBP15.26■□□□□ 0.03
PRDM2-208ENST00000487453 ABT1Q9ULW3 272 aaKnown RBP15.26■□□□□ 0.03
PRDM2-208ENST00000487453 ANGEL1Q9UNK9 670 aaKnown RBP15.26■□□□□ 0.03
PRDM2-208ENST00000487453 LAMA4Q16363 1823 aa15.26■□□□□ 0.03
PRDM2-208ENST00000487453 PATL2C9JE40 543 aaKnown RBP15.25■□□□□ 0.03
PRDM2-208ENST00000487453 CYP2D6P10635 497 aa15.25■□□□□ 0.03
PRDM2-208ENST00000487453 MOB2Q70IA6 237 aa15.25■□□□□ 0.03
PRDM2-208ENST00000487453 ARMC9Q7Z3E5 817 aa15.25■□□□□ 0.03
PRDM2-208ENST00000487453 IFNL3Q8IZI9 196 aa15.25■□□□□ 0.03
PRDM2-208ENST00000487453 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.25■□□□□ 0.03
PRDM2-208ENST00000487453 PI4KBQ9UBF8 816 aa15.25■□□□□ 0.03
PRDM2-208ENST00000487453 MKRN1Q9UHC7 482 aaKnown RBP15.25■□□□□ 0.03
PRDM2-208ENST00000487453 MYH8P13535 1937 aa15.25■□□□□ 0.03
PRDM2-208ENST00000487453 CYP2D7A0A087X1C5 515 aa15.24■□□□□ 0.03
PRDM2-208ENST00000487453 USP17L12C9JPN9 530 aa15.24■□□□□ 0.03
PRDM2-208ENST00000487453 USP17L21D6R901 530 aa15.24■□□□□ 0.03
PRDM2-208ENST00000487453 SGSM2O43147 1006 aa15.24■□□□□ 0.03
PRDM2-208ENST00000487453 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
PRDM2-208ENST00000487453 FKBP1BP68106 108 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms