RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TMEM88BA6NKF7 163 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 SIN3BO75182 1162 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 SPATA31C1P0DKV0 1188 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 HMGB2P26583 209 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 INPP5BP32019 993 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 IDH3AP50213 366 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 NME9Q86XW9 330 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 ANKRD24Q8TF21 1146 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 ACSBG1Q96GR2 724 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 MDFIQ99750 246 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 NSD2O96028 1365 aa7.21□□□□□ -1.25
R3HDM1-218ENST00000487294 MICAL2O94851 1124 aa7.21□□□□□ -1.26
R3HDM1-218ENST00000487294 ATP2B4P23634 1241 aa7.21□□□□□ -1.26
R3HDM1-218ENST00000487294 POLD1P28340 1107 aa7.21□□□□□ -1.26
R3HDM1-218ENST00000487294 NAA30Q147X3 362 aaPredicted RBP7.21□□□□□ -1.26
R3HDM1-218ENST00000487294 C16orf46Q6P387 395 aa7.21□□□□□ -1.26
R3HDM1-218ENST00000487294 IFT43Q96FT9 208 aa7.21□□□□□ -1.26
R3HDM1-218ENST00000487294 GSX2Q9BZM3 304 aa7.21□□□□□ -1.26
R3HDM1-218ENST00000487294 SHANK3Q9BYB0 1731 aa7.21□□□□□ -1.26
R3HDM1-218ENST00000487294 SPDYE3A6NKU9 549 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 OPLAHO14841 1288 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 GRIN3BO60391 1043 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 PTCD1O75127 700 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 GPR162Q16538 588 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 FAM26DQ5JW98 314 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 HDGFL2Q7Z4V5 671 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 TNFRSF25Q93038 417 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 TRIM11Q96F44 468 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 ARID3AQ99856 593 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 TERF2IPQ9NYB0 399 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 CGNL1Q0VF96 1302 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 TUBGCP6Q96RT7 1819 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 A0A1W2PP64 1363 aa7.2□□□□□ -1.26
R3HDM1-218ENST00000487294 ELOA3CA0A087WX78 387 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 CARNS1A5YM72 827 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 ELOA3DA6NLF2 546 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 ITGB7P26010 798 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 GATA4P43694 442 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 ARSDP51689 593 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 ELOA3BQ3SY89 546 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 TREML1Q86YW5 311 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 ETFBKMTQ8IXQ9 262 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 ELOA3Q8NG57 546 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 BHMTQ93088 406 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 SIN3AQ96ST3 1273 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 SLC12A5Q9H2X9 1139 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 TFCP2L1Q9NZI6 479 aa7.19□□□□□ -1.26
R3HDM1-218ENST00000487294 ADARB2-AS1A8MUL3 147 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 HOXC9P31274 260 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 SCNN1AP37088 669 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 NEUROD1Q13562 356 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 CCINQ13939 588 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 PLVAPQ9BX97 442 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 SEMA6BQ9H3T3 888 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 SEPT3Q9UH03 358 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 USP20Q9Y2K6 914 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 CD2APQ9Y5K6 639 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 RTL1A6NKG5 1358 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 KAT6BQ8WYB5 2073 aa7.18□□□□□ -1.26
R3HDM1-218ENST00000487294 EPB42P16452 691 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 YBX3P16989 372 aaKnown RBP eCLIP7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 BRD2P25440 801 aaKnown RBP7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 DOC2BQ14184 412 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 COL23A1Q86Y22 540 aaPredicted RBP7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 FLAD1Q8NFF5 587 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 NLGN2Q8NFZ4 835 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 ZCRB1Q8TBF4 217 aaKnown RBP7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 DDX54Q8TDD1 881 aaKnown RBP7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 TESK2Q96S53 571 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 CARD11Q9BXL7 1154 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 EFCC1Q9HA90 598 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 DOT1LQ8TEK3 1739 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 MAP3K19Q56UN5 1328 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 ADCY9O60503 1353 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 KIF24Q5T7B8 1368 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 MEGF6O75095 1541 aa7.17□□□□□ -1.26
R3HDM1-218ENST00000487294 ALAS2P22557 587 aa7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 SSFA2P28290 1259 aa7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 PRRT3Q5FWE3 981 aa7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 ZMYM1Q5SVZ6 1142 aa7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 TMC1Q8TDI8 760 aa7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 COG3Q96JB2 828 aa7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 CCNL1Q9UK58 526 aaPredicted RBP7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 RTCBQ9Y3I0 505 aaKnown RBP7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 USP47Q96K76 1375 aa7.16□□□□□ -1.26
R3HDM1-218ENST00000487294 NFKB1P19838 968 aa7.15□□□□□ -1.26
R3HDM1-218ENST00000487294 RGL4Q8IZJ4 473 aa7.15□□□□□ -1.26
R3HDM1-218ENST00000487294 PNMA5Q96PV4 448 aa7.15□□□□□ -1.26
R3HDM1-218ENST00000487294 PSMG3-AS1Q96PY0 264 aa7.15□□□□□ -1.26
R3HDM1-218ENST00000487294 C11orf16Q9NQ32 467 aa7.15□□□□□ -1.26
R3HDM1-218ENST00000487294 ZFATQ9P243 1243 aa7.15□□□□□ -1.26
R3HDM1-218ENST00000487294 STARD13Q9Y3M8 1113 aa7.15□□□□□ -1.26
R3HDM1-218ENST00000487294 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.15□□□□□ -1.26
R3HDM1-218ENST00000487294 NCAPD2Q15021 1401 aa7.15□□□□□ -1.27
R3HDM1-218ENST00000487294 C5P01031 1676 aa7.15□□□□□ -1.27
R3HDM1-218ENST00000487294 ZBTB39O15060 712 aa7.14□□□□□ -1.27
R3HDM1-218ENST00000487294 INSRP06213 1382 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms