RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 WDR33Q9C0J8 1336 aaKnown RBP7.25□□□□□ -1.25
VAMP3-203ENST00000487194 USP17L3A6NCW0 530 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 USP17L4A6NCW7 530 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 B4E1Z4 1266 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 USP17L12C9JPN9 530 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 USP17L21D6R901 530 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 ORC4O43929 436 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 FGRP09769 529 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 LIFRP42702 1097 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 ANTXR2P58335 489 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 PDE4BQ07343 736 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 APOBRQ0VD83 1088 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 COL9A3Q14050 684 aaPredicted RBP7.24□□□□□ -1.25
VAMP3-203ENST00000487194 GRIK5Q16478 980 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 AOC3Q16853 763 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 DACT2Q5SW24 774 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 CLEC17AQ6ZS10 378 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 CHST3Q7LGC8 479 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 USP17L1Q7RTZ2 530 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 NECAB1Q8N987 351 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 SH3RF3Q8TEJ3 882 aaPredicted RBP7.24□□□□□ -1.25
VAMP3-203ENST00000487194 TNPO1Q92973 898 aaKnown RBP7.24□□□□□ -1.25
VAMP3-203ENST00000487194 TEKT1Q969V4 418 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 SGIP1Q9BQI5 828 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 LRRC2Q9BYS8 371 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 ZNF287Q9HBT7 754 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 TOMM22Q9NS69 142 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 MCM9Q9NXL9 1143 aa7.24□□□□□ -1.25
VAMP3-203ENST00000487194 MYH2Q9UKX2 1941 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 KLF18A0A0U1RQI7 1052 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 DDX11L8A8MPP1 907 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 GOLGA6L22H0YM25 854 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 SH2B2O14492 632 aaPredicted RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 IFIT3O14879 490 aaKnown RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 KDM4AO75164 1064 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 BRD1O95696 1058 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 POLR3DP05423 398 aaPredicted RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 GJB2P29033 226 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 PDIA3P30101 505 aaKnown RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 MCM4P33991 863 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 RCAN1P53805 252 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 HMGN5P82970 282 aaKnown RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 STK3Q13188 491 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 CCDC178Q5BJE1 867 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 TMEM67Q5HYA8 995 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 RRP12Q5JTH9 1297 aaKnown RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 C12orf60Q5U649 245 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 CPLX2Q6PUV4 134 aaKnown RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 SYNE3Q6ZMZ3 975 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 NFXL1Q6ZNB6 911 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 CYB5R4Q7L1T6 521 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 SGMS1Q86VZ5 419 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 IQCA1Q86XH1 822 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 LARGE2Q8N3Y3 721 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 CERS5Q8N5B7 392 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 TGFBRAP1Q8WUH2 860 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 UBAC1Q9BSL1 405 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 ZSWIM5Q9P217 1185 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 MKRN1Q9UHC7 482 aaKnown RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 NAP1L2Q9ULW6 460 aaPredicted RBP7.23□□□□□ -1.25
VAMP3-203ENST00000487194 DAGLAQ9Y4D2 1042 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 ATP6V1DQ9Y5K8 247 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 CHD4Q14839 1912 aa7.23□□□□□ -1.25
VAMP3-203ENST00000487194 ROBO3Q96MS0 1386 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 CCDC69A6NI79 296 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 GOLGA8BA8MQT2 603 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 F8W031 263 aaPredicted RBP7.22□□□□□ -1.25
VAMP3-203ENST00000487194 ZBTB43O43298 467 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 STX6O43752 255 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 RANBP6O60518 1105 aaKnown RBP7.22□□□□□ -1.25
VAMP3-203ENST00000487194 CDKL5O76039 1030 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 SYT1P21579 422 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 IARSP41252 1262 aaKnown RBP7.22□□□□□ -1.25
VAMP3-203ENST00000487194 CRKP46108 304 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 MMP14P50281 582 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 METAP2P50579 478 aaKnown RBP eCLIP7.22□□□□□ -1.25
VAMP3-203ENST00000487194 RHBDL3P58872 404 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 ST3GAL1Q11201 340 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 SCRN1Q12765 414 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 NBR1Q14596 966 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 WTAPQ15007 396 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 PPP2R5BQ15173 497 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 MAPKAPK5Q8IW41 473 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 NIM1KQ8IY84 436 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 FAM184AQ8NB25 1140 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 IGDCC4Q8TDY8 1250 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 ZDHHC15Q96MV8 337 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 TAOK3Q9H2K8 898 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 LY9Q9HBG7 655 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 PPP1R1BQ9UD71 204 aaPredicted RBP7.22□□□□□ -1.25
VAMP3-203ENST00000487194 SERPINA10Q9UK55 444 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 TAOK2Q9UL54 1235 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.22□□□□□ -1.25
VAMP3-203ENST00000487194 SLC12A7Q9Y666 1083 aa7.22□□□□□ -1.25
VAMP3-203ENST00000487194 BAZ2AQ9UIF9 1905 aaKnown RBP7.21□□□□□ -1.25
VAMP3-203ENST00000487194 LAMB1P07942 1786 aa7.21□□□□□ -1.25
VAMP3-203ENST00000487194 CYP2D7A0A087X1C5 515 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 CCDC196A0A1B0GTZ2 297 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 PSDA5PKW4 1024 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms