RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 SNAPC2Q13487 334 aa23.43■■□□□ 1.34
CLIP2-206ENST00000487091 FBXO46Q6PJ61 603 aaPredicted RBP23.43■■□□□ 1.34
CLIP2-206ENST00000487091 ZCCHC17Q9NP64 241 aaKnown RBP23.43■■□□□ 1.34
CLIP2-206ENST00000487091 LRP2BPQ9P2M1 347 aa23.43■■□□□ 1.34
CLIP2-206ENST00000487091 HPS5Q9UPZ3 1129 aa23.43■■□□□ 1.34
CLIP2-206ENST00000487091 ATRNL1Q5VV63 1379 aa23.42■■□□□ 1.34
CLIP2-206ENST00000487091 SH3BP5LQ7L8J4 393 aa23.42■■□□□ 1.34
CLIP2-206ENST00000487091 ZSCAN29Q8IWY8 852 aaPredicted RBP23.42■■□□□ 1.34
CLIP2-206ENST00000487091 ERO1AQ96HE7 468 aa23.42■■□□□ 1.34
CLIP2-206ENST00000487091 DDX4Q9NQI0 724 aaKnown RBP23.42■■□□□ 1.34
CLIP2-206ENST00000487091 RCAN3Q9UKA8 241 aa23.42■■□□□ 1.34
CLIP2-206ENST00000487091 DOCK2Q92608 1830 aa23.41■■□□□ 1.34
CLIP2-206ENST00000487091 TAF1CQ15572 869 aaPredicted RBP23.41■■□□□ 1.34
CLIP2-206ENST00000487091 ERC1Q8IUD2 1116 aa23.41■■□□□ 1.34
CLIP2-206ENST00000487091 FAM43AQ8N2R8 423 aa23.41■■□□□ 1.34
CLIP2-206ENST00000487091 ZFYVE28Q9HCC9 887 aa23.41■■□□□ 1.34
CLIP2-206ENST00000487091 DBNLQ9UJU6 430 aaKnown RBP23.41■■□□□ 1.34
CLIP2-206ENST00000487091 DDX19BQ9UMR2 479 aa23.41■■□□□ 1.34
CLIP2-206ENST00000487091 DDTLA6NHG4 134 aaPredicted RBP23.4■■□□□ 1.34
CLIP2-206ENST00000487091 PHF20L1A8MW92 1017 aa23.4■■□□□ 1.34
CLIP2-206ENST00000487091 SP3Q02447 781 aa23.4■■□□□ 1.34
CLIP2-206ENST00000487091 HSP90AB4PQ58FF6 505 aa23.4■■□□□ 1.34
CLIP2-206ENST00000487091 EAF2Q96CJ1 260 aaPredicted RBP23.4■■□□□ 1.34
CLIP2-206ENST00000487091 SNRKQ9NRH2 765 aa23.4■■□□□ 1.34
CLIP2-206ENST00000487091 KCNH4Q9UQ05 1017 aa23.4■■□□□ 1.34
CLIP2-206ENST00000487091 BTBD19C9JJ37 291 aa23.39■■□□□ 1.33
CLIP2-206ENST00000487091 CYP2E1P05181 493 aaPredicted RBP23.39■■□□□ 1.33
CLIP2-206ENST00000487091 PICALMQ13492 652 aa23.39■■□□□ 1.33
CLIP2-206ENST00000487091 RPAP2Q8IXW5 612 aaPredicted RBP23.39■■□□□ 1.33
CLIP2-206ENST00000487091 CCDC8Q9H0W5 538 aaPredicted RBP23.39■■□□□ 1.33
CLIP2-206ENST00000487091 TRIM17Q9Y577 477 aa23.39■■□□□ 1.33
CLIP2-206ENST00000487091 MLLT1Q03111 559 aaPredicted RBP23.38■■□□□ 1.33
CLIP2-206ENST00000487091 NAA16Q6N069 864 aaPredicted RBP23.38■■□□□ 1.33
CLIP2-206ENST00000487091 OTOP1Q7RTM1 612 aa23.38■■□□□ 1.33
CLIP2-206ENST00000487091 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
CLIP2-206ENST00000487091 ZBTB40Q9NUA8 1239 aa23.38■■□□□ 1.33
CLIP2-206ENST00000487091 EXOC6BQ9Y2D4 811 aa23.38■■□□□ 1.33
CLIP2-206ENST00000487091 COG6Q9Y2V7 657 aa23.38■■□□□ 1.33
CLIP2-206ENST00000487091 TBC1D12O60347 775 aa23.37■■□□□ 1.33
CLIP2-206ENST00000487091 SCYL3Q8IZE3 742 aa23.37■■□□□ 1.33
CLIP2-206ENST00000487091 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.37■■□□□ 1.33
CLIP2-206ENST00000487091 NOL10Q9BSC4 688 aaKnown RBP23.37■■□□□ 1.33
CLIP2-206ENST00000487091 TLR7Q9NYK1 1049 aaKnown RBP23.37■■□□□ 1.33
CLIP2-206ENST00000487091 BAG3O95817 575 aa23.36■■□□□ 1.33
CLIP2-206ENST00000487091 ZAP70P43403 619 aa23.36■■□□□ 1.33
CLIP2-206ENST00000487091 CD99L2Q8TCZ2 262 aa23.36■■□□□ 1.33
CLIP2-206ENST00000487091 COL2A1P02458 1487 aaPredicted RBP23.36■■□□□ 1.33
CLIP2-206ENST00000487091 CXCL11O14625 94 aa23.35■■□□□ 1.33
CLIP2-206ENST00000487091 TLR2O60603 784 aa23.35■■□□□ 1.33
CLIP2-206ENST00000487091 CTNND1O60716 968 aaKnown RBP23.35■■□□□ 1.33
CLIP2-206ENST00000487091 PLCG2P16885 1265 aa23.35■■□□□ 1.33
CLIP2-206ENST00000487091 PPP4CP60510 307 aa23.35■■□□□ 1.33
CLIP2-206ENST00000487091 ANKRD23Q86SG2 305 aa23.35■■□□□ 1.33
CLIP2-206ENST00000487091 TEX11Q8IYF3 940 aa23.35■■□□□ 1.33
CLIP2-206ENST00000487091 OSBPL5Q9H0X9 879 aaPredicted RBP23.35■■□□□ 1.33
CLIP2-206ENST00000487091 EFCC1Q9HA90 598 aa23.35■■□□□ 1.33
CLIP2-206ENST00000487091 PICK1Q9NRD5 415 aa23.35■■□□□ 1.33
CLIP2-206ENST00000487091 HMMRO75330 724 aa23.34■■□□□ 1.33
CLIP2-206ENST00000487091 PTPRAP18433 802 aa23.34■■□□□ 1.33
CLIP2-206ENST00000487091 ARHGEF6Q15052 776 aa23.34■■□□□ 1.33
CLIP2-206ENST00000487091 RHPN1Q8TCX5 695 aa23.34■■□□□ 1.33
CLIP2-206ENST00000487091 MAST2Q6P0Q8 1798 aa23.34■■□□□ 1.33
CLIP2-206ENST00000487091 MYO5AQ9Y4I1 1855 aaKnown RBP23.33■■□□□ 1.33
CLIP2-206ENST00000487091 SOX10P56693 466 aa23.33■■□□□ 1.33
CLIP2-206ENST00000487091 PDE3AQ14432 1141 aa23.33■■□□□ 1.33
CLIP2-206ENST00000487091 AACSQ86V21 672 aa23.33■■□□□ 1.33
CLIP2-206ENST00000487091 SH3RF3Q8TEJ3 882 aaPredicted RBP23.33■■□□□ 1.33
CLIP2-206ENST00000487091 PIH1D3Q9NQM4 214 aaKnown RBP23.33■■□□□ 1.33
CLIP2-206ENST00000487091 MOGSQ13724 837 aa23.32■■□□□ 1.32
CLIP2-206ENST00000487091 SIRT2Q8IXJ6 389 aa23.32■■□□□ 1.32
CLIP2-206ENST00000487091 KIF1BPQ96EK5 621 aa23.32■■□□□ 1.32
CLIP2-206ENST00000487091 AATFQ9NY61 560 aaKnown RBP eCLIP23.32■■□□□ 1.32
CLIP2-206ENST00000487091 PTPN22Q9Y2R2 807 aa23.32■■□□□ 1.32
CLIP2-206ENST00000487091 ZHX2Q9Y6X8 837 aa23.32■■□□□ 1.32
CLIP2-206ENST00000487091 SLURP2P0DP57 97 aa23.31■■□□□ 1.32
CLIP2-206ENST00000487091 TMED8Q6PL24 325 aaPredicted RBP23.31■■□□□ 1.32
CLIP2-206ENST00000487091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.31■■□□□ 1.32
CLIP2-206ENST00000487091 AFG3L2Q9Y4W6 797 aa23.31■■□□□ 1.32
CLIP2-206ENST00000487091 PDHXO00330 501 aa23.3■■□□□ 1.32
CLIP2-206ENST00000487091 CAP1Q01518 475 aa23.3■■□□□ 1.32
CLIP2-206ENST00000487091 FASTKD5Q7L8L6 764 aaKnown RBP23.3■■□□□ 1.32
CLIP2-206ENST00000487091 ADGRA1Q86SQ6 560 aa23.3■■□□□ 1.32
CLIP2-206ENST00000487091 CLASRPQ8N2M8 674 aaKnown RBP23.3■■□□□ 1.32
CLIP2-206ENST00000487091 DHX36Q9H2U1 1008 aaKnown RBP23.3■■□□□ 1.32
CLIP2-206ENST00000487091 IL1RAPL2Q9NP60 686 aa23.3■■□□□ 1.32
CLIP2-206ENST00000487091 DOCK1Q14185 1865 aa23.3■■□□□ 1.32
CLIP2-206ENST00000487091 RAB11FIP3O75154 756 aa23.29■■□□□ 1.32
CLIP2-206ENST00000487091 C17orf99Q6UX52 265 aa23.29■■□□□ 1.32
CLIP2-206ENST00000487091 PI4KBQ9UBF8 816 aa23.29■■□□□ 1.32
CLIP2-206ENST00000487091 HERC5Q9UII4 1024 aaKnown RBP23.29■■□□□ 1.32
CLIP2-206ENST00000487091 A0A0G2JLL6 359 aaPredicted RBP23.28■■□□□ 1.32
CLIP2-206ENST00000487091 IDH1O75874 414 aaKnown RBP23.28■■□□□ 1.32
CLIP2-206ENST00000487091 CYP7A1P22680 504 aa23.28■■□□□ 1.32
CLIP2-206ENST00000487091 KIF22Q14807 665 aa23.28■■□□□ 1.32
CLIP2-206ENST00000487091 GPAT2Q6NUI2 795 aa23.28■■□□□ 1.32
CLIP2-206ENST00000487091 PRRT2Q7Z6L0 340 aaPredicted RBP23.28■■□□□ 1.32
CLIP2-206ENST00000487091 CERS3Q8IU89 383 aa23.28■■□□□ 1.32
CLIP2-206ENST00000487091 PHIPQ8WWQ0 1821 aa23.27■■□□□ 1.32
CLIP2-206ENST00000487091 LACTBP83111 547 aaPredicted RBP23.27■■□□□ 1.32
CLIP2-206ENST00000487091 MAP3K12Q12852 859 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms