RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 DDX11L8A8MPP1 907 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 LARGE1O95461 756 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 SLC3A2P08195 630 aaKnown RBP8.3□□□□□ -1.08
SF3A3-206ENST00000487062 PCP11498 1178 aaKnown RBP8.3□□□□□ -1.08
SF3A3-206ENST00000487062 PDCP20941 246 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 MCM4P33991 863 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 PPP4CP60510 307 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 GTF2IP78347 998 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 PPARAQ07869 468 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 MFSD14BQ5SR56 506 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 PODNQ7Z5L7 613 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 SLC51AQ86UW1 340 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 AMOTL1Q8IY63 956 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 TTLL6Q8N841 843 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 SDR42E1Q8WUS8 393 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 STAG1Q8WVM7 1258 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 TNPO1Q92973 898 aaKnown RBP8.3□□□□□ -1.08
SF3A3-206ENST00000487062 GTF3C6Q969F1 213 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 ZNF274Q96GC6 653 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-206ENST00000487062 LLPHQ9BRT6 129 aaKnown RBP8.3□□□□□ -1.08
SF3A3-206ENST00000487062 MTA3Q9BTC8 594 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 LRRC2Q9BYS8 371 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 ANAPC4Q9UJX5 808 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 KIF3AQ9Y496 699 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 MROH7-TTC4A0A0A0MT08 1334 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 FOCADQ5VW36 1801 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 B4E1Z4 1266 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 DHX16O60231 1041 aaKnown RBP8.29□□□□□ -1.08
SF3A3-206ENST00000487062 PFKFB2O60825 505 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 GJB2P29033 226 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 USP5P45974 858 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 PSEN1P49768 467 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 NT5C2P49902 561 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 APOBRQ0VD83 1088 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 STK3Q13188 491 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 MFSD10Q14728 455 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 SART3Q15020 963 aaKnown RBP8.29□□□□□ -1.08
SF3A3-206ENST00000487062 SBK1Q52WX2 424 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 CLEC17AQ6ZS10 378 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 TBC1D10CQ8IV04 446 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 NECAB1Q8N987 351 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 ZNF384Q8TF68 577 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 FBXW7Q969H0 707 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 FAM163AQ96GL9 167 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-206ENST00000487062 RTFDC1Q9BY42 306 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-206ENST00000487062 PDGFDQ9GZP0 370 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-206ENST00000487062 MTFR1LQ9H019 292 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 ZMYND15Q9H091 742 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 NBPF3Q9H094 633 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 TOMM22Q9NS69 142 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 ARPP21Q9UBL0 812 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-206ENST00000487062 NAP1L2Q9ULW6 460 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-206ENST00000487062 PCDHB8Q9UN66 801 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 PCDHB13Q9Y5F0 798 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 MYH1P12882 1939 aa8.29□□□□□ -1.08
SF3A3-206ENST00000487062 ERICH2A1L162 156 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 BRD1O95696 1058 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 EVCP57679 992 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 ANTXR2P58335 489 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 TGFB2P61812 414 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 FKBP1AP62942 108 aaKnown RBP8.28□□□□□ -1.08
SF3A3-206ENST00000487062 HMGN5P82970 282 aaKnown RBP8.28□□□□□ -1.08
SF3A3-206ENST00000487062 COL9A3Q14050 684 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-206ENST00000487062 DOK7Q18PE1 504 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 SOGA3Q5TF21 947 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 SMYD5Q6GMV2 418 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 OLFM4Q6UX06 510 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 CHST3Q7LGC8 479 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 REM2Q8IYK8 340 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-206ENST00000487062 RTKN2Q8IZC4 609 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 TMTC2Q8N394 836 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 ESR2Q92731 530 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 DCP1AQ9NPI6 582 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-206ENST00000487062 ANGEL1Q9UNK9 670 aaKnown RBP8.28□□□□□ -1.08
SF3A3-206ENST00000487062 ATP6V1DQ9Y5K8 247 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 PSME4Q14997 1843 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 ECM29Q5VYK3 1845 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 NEDD4P46934 1319 aa8.28□□□□□ -1.08
SF3A3-206ENST00000487062 GPR75-ASB3A0A0A6YYF3 556 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 KLF18A0A0U1RQI7 1052 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 CCDC69A6NI79 296 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 USP17L12C9JPN9 530 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 USP17L21D6R901 530 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 SH2B2O14492 632 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-206ENST00000487062 IFIT3O14879 490 aaKnown RBP8.27□□□□□ -1.09
SF3A3-206ENST00000487062 STX6O43752 255 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 KDM4AO75164 1064 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 ZBTB7AO95365 584 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 BAG4O95429 457 aaKnown RBP8.27□□□□□ -1.09
SF3A3-206ENST00000487062 SYT1P21579 422 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 PDIA3P30101 505 aaKnown RBP8.27□□□□□ -1.09
SF3A3-206ENST00000487062 LIFRP42702 1097 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 BTDP43251 543 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 PDE4BQ07343 736 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 KIAA2012Q0VF49 1180 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 DIXDC1Q155Q3 683 aa8.27□□□□□ -1.09
SF3A3-206ENST00000487062 TMEM67Q5HYA8 995 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms