RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PCDHB5Q9Y5E4 795 aa9.28□□□□□ -0.92
LTN1-206ENST00000486427 DCDC2CA8MYV0 355 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 NEFMP07197 916 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 ADMP35318 185 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 HNRNPUQ00839 825 aaKnown RBP eCLIP9.27□□□□□ -0.93
LTN1-206ENST00000486427 TTLL4Q14679 1199 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 SLC51AQ86UW1 340 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 SHKBP1Q8TBC3 707 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 LGR6Q9HBX8 967 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 PCDHA4Q9UN74 947 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 DAGLAQ9Y4D2 1042 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 CSADQ9Y600 493 aa9.27□□□□□ -0.93
LTN1-206ENST00000486427 F6X3S4 739 aa9.26□□□□□ -0.93
LTN1-206ENST00000486427 HCLS1P14317 486 aaPredicted RBP9.26□□□□□ -0.93
LTN1-206ENST00000486427 RPS26P62854 115 aaKnown RBP9.26□□□□□ -0.93
LTN1-206ENST00000486427 SEZ6L2Q6UXD5 910 aa9.26□□□□□ -0.93
LTN1-206ENST00000486427 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.26□□□□□ -0.93
LTN1-206ENST00000486427 AGMOQ6ZNB7 445 aa9.26□□□□□ -0.93
LTN1-206ENST00000486427 FBXL6Q8N531 539 aa9.26□□□□□ -0.93
LTN1-206ENST00000486427 NOC4LQ9BVI4 516 aaKnown RBP9.26□□□□□ -0.93
LTN1-206ENST00000486427 PIDD1Q9HB75 910 aa9.26□□□□□ -0.93
LTN1-206ENST00000486427 TGFB1P01137 390 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 F13BP05160 661 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 ERVK-24P63145 666 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 SEPT6Q14141 434 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 MAP7Q14244 749 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 INPP5AQ14642 412 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 PPM1JQ5JR12 505 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 SCARA3Q6AZY7 606 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 C12orf40Q86WS4 652 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 GATA6Q92908 595 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 C1GALT1Q9NS00 363 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 TLR6Q9Y2C9 796 aa9.25□□□□□ -0.93
LTN1-206ENST00000486427 PRR19A6NJB7 356 aa9.24□□□□□ -0.93
LTN1-206ENST00000486427 WDR64B1ANS9 1081 aa9.24□□□□□ -0.93
LTN1-206ENST00000486427 TFE3P19532 575 aaPredicted RBP9.24□□□□□ -0.93
LTN1-206ENST00000486427 CDK8P49336 464 aa9.24□□□□□ -0.93
LTN1-206ENST00000486427 RING1Q06587 406 aa9.24□□□□□ -0.93
LTN1-206ENST00000486427 LRFN4Q6PJG9 635 aa9.24□□□□□ -0.93
LTN1-206ENST00000486427 SMYD4Q8IYR2 804 aaPredicted RBP9.24□□□□□ -0.93
LTN1-206ENST00000486427 ISL2Q96A47 359 aa9.24□□□□□ -0.93
LTN1-206ENST00000486427 RNGTTO60942 597 aaKnown RBP9.23□□□□□ -0.93
LTN1-206ENST00000486427 NTF4P34130 210 aa9.23□□□□□ -0.93
LTN1-206ENST00000486427 ZAR1Q86SH2 424 aa9.23□□□□□ -0.93
LTN1-206ENST00000486427 RNF214Q8ND24 703 aa9.23□□□□□ -0.93
LTN1-206ENST00000486427 TBC1D32Q96NH3 1257 aa9.23□□□□□ -0.93
LTN1-206ENST00000486427 RBM47A0AV96 593 aaKnown RBP9.22□□□□□ -0.93
LTN1-206ENST00000486427 LDLRAD1Q5T700 205 aa9.22□□□□□ -0.93
LTN1-206ENST00000486427 UBE3DQ7Z6J8 389 aa9.22□□□□□ -0.93
LTN1-206ENST00000486427 PHC3Q8NDX5 983 aa9.22□□□□□ -0.93
LTN1-206ENST00000486427 PLPPR2Q96GM1 343 aa9.22□□□□□ -0.93
LTN1-206ENST00000486427 FAM170BA6NMN3 283 aa9.21□□□□□ -0.94
LTN1-206ENST00000486427 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
LTN1-206ENST00000486427 RLBP1P12271 317 aa9.2□□□□□ -0.94
LTN1-206ENST00000486427 ITGAEP38570 1179 aa9.2□□□□□ -0.94
LTN1-206ENST00000486427 CDK5R2Q13319 367 aa9.2□□□□□ -0.94
LTN1-206ENST00000486427 ELMO3Q96BJ8 720 aa9.2□□□□□ -0.94
LTN1-206ENST00000486427 MED26O95402 600 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 LMNB1P20700 586 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 WIPI1Q5MNZ9 446 aaPredicted RBP9.19□□□□□ -0.94
LTN1-206ENST00000486427 ZBTB37Q5TC79 503 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 CYFIP1Q7L576 1253 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 Q8N3U1 123 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 RGS22Q8NE09 1264 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 MIR1-1HGQ9H1L0 117 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 PCOLCE2Q9UKZ9 415 aa9.19□□□□□ -0.94
LTN1-206ENST00000486427 SCO2A0A1W2PP80 73 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 PRAMEF27A3QJZ7 478 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 SSTR4P31391 388 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 JARID2Q92833 1246 aaPredicted RBP9.18□□□□□ -0.94
LTN1-206ENST00000486427 RHOVQ96L33 236 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 RSRP1Q9BUV0 290 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 OSBPL1AQ9BXW6 950 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 SSU72Q9NP77 194 aaKnown RBP9.18□□□□□ -0.94
LTN1-206ENST00000486427 COPRSQ9NQ92 184 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 PICK1Q9NRD5 415 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 ATG3Q9NT62 314 aa9.18□□□□□ -0.94
LTN1-206ENST00000486427 FANCGO15287 622 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 PF4P02776 101 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 HOXA10P31260 410 aaPredicted RBP9.17□□□□□ -0.94
LTN1-206ENST00000486427 CD97P48960 835 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 LRP8Q14114 963 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 ZNF765Q7L2R6 523 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 ERMP1Q7Z2K6 904 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 HDXQ7Z353 690 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.17□□□□□ -0.94
LTN1-206ENST00000486427 TMEM74Q96NL1 305 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 SNCAIPQ9Y6H5 919 aa9.17□□□□□ -0.94
LTN1-206ENST00000486427 GFRA2O00451 464 aa9.16□□□□□ -0.94
LTN1-206ENST00000486427 HYAL3O43820 417 aaPredicted RBP9.16□□□□□ -0.94
LTN1-206ENST00000486427 GBP2P32456 591 aaPredicted RBP9.16□□□□□ -0.94
LTN1-206ENST00000486427 CAMK2GQ13555 558 aaPredicted RBP9.16□□□□□ -0.94
LTN1-206ENST00000486427 ARTNQ5T4W7 220 aa9.16□□□□□ -0.94
LTN1-206ENST00000486427 BNC2Q6ZN30 1099 aaPredicted RBP9.16□□□□□ -0.94
LTN1-206ENST00000486427 RELL1Q8IUW5 271 aa9.16□□□□□ -0.94
LTN1-206ENST00000486427 GIMAP7Q8NHV1 300 aa9.16□□□□□ -0.94
LTN1-206ENST00000486427 KBTBD4Q9NVX7 518 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms