RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 TEX11Q8IYF3 940 aa13.47□□□□□ -0.25
SNX21-211ENST00000486336 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNX21-211ENST00000486336 WDHD1O75717 1129 aaPredicted RBP13.46□□□□□ -0.25
SNX21-211ENST00000486336 BAG3O95817 575 aa13.46□□□□□ -0.25
SNX21-211ENST00000486336 ALDH1A1P00352 501 aa13.46□□□□□ -0.25
SNX21-211ENST00000486336 CYP7A1P22680 504 aa13.46□□□□□ -0.25
SNX21-211ENST00000486336 GTF2A2P52657 109 aa13.46□□□□□ -0.25
SNX21-211ENST00000486336 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
SNX21-211ENST00000486336 RHBDL3P58872 404 aa13.46□□□□□ -0.25
SNX21-211ENST00000486336 ERO1BQ86YB8 467 aa13.46□□□□□ -0.25
SNX21-211ENST00000486336 SH3RF3Q8TEJ3 882 aaPredicted RBP13.46□□□□□ -0.25
SNX21-211ENST00000486336 SNCAIPQ9Y6H5 919 aa13.46□□□□□ -0.25
SNX21-211ENST00000486336 CCL15-CCL14A0A0B4J2E2 113 aa13.45□□□□□ -0.26
SNX21-211ENST00000486336 DDTLA6NHG4 134 aaPredicted RBP13.45□□□□□ -0.26
SNX21-211ENST00000486336 IGF2BP3O00425 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNX21-211ENST00000486336 CCL15Q16663 113 aa13.45□□□□□ -0.26
SNX21-211ENST00000486336 SH3BP5LQ7L8J4 393 aa13.45□□□□□ -0.26
SNX21-211ENST00000486336 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
SNX21-211ENST00000486336 MCOLN1Q9GZU1 580 aa13.45□□□□□ -0.26
SNX21-211ENST00000486336 R3HDMLQ9H3Y0 253 aa13.45□□□□□ -0.26
SNX21-211ENST00000486336 ANTXR1Q9H6X2 564 aa13.45□□□□□ -0.26
SNX21-211ENST00000486336 OTOFQ9HC10 1997 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 SPDYE5A6NIY4 337 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 GPR25O00155 361 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
SNX21-211ENST00000486336 MAP4K4O95819 1239 aaPredicted RBP13.44□□□□□ -0.26
SNX21-211ENST00000486336 SLURP2P0DP57 97 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 PLCG2P16885 1265 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 MAP3K12Q12852 859 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 MAGEB6Q8N7X4 407 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 ZNF296Q8WUU4 475 aaPredicted RBP13.44□□□□□ -0.26
SNX21-211ENST00000486336 ABHD8Q96I13 439 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 LRRCC1Q9C099 1032 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 ZNF112Q9UJU3 913 aa13.44□□□□□ -0.26
SNX21-211ENST00000486336 CCDC85CA6NKD9 419 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 DYNLL1P63167 89 aaKnown RBP13.43□□□□□ -0.26
SNX21-211ENST00000486336 PPIL2Q13356 520 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 SNAPC2Q13487 334 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 MAPKAPK5Q8IW41 473 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 MIGA1Q8NAN2 632 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 TGFBRAP1Q8WUH2 860 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 BRI3BPQ8WY22 251 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 MS4A4AQ96JQ5 239 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 PTPN18Q99952 460 aa13.43□□□□□ -0.26
SNX21-211ENST00000486336 OSBPL5Q9H0X9 879 aaPredicted RBP13.43□□□□□ -0.26
SNX21-211ENST00000486336 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.43□□□□□ -0.26
SNX21-211ENST00000486336 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
SNX21-211ENST00000486336 GOLIM4O00461 696 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 IRF6O14896 467 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 FKTNO75072 461 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 CETPP11597 493 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 PPP4CP60510 307 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 PPATQ06203 517 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 TTF1Q15361 905 aaPredicted RBP13.42□□□□□ -0.26
SNX21-211ENST00000486336 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 BOLA2Q9H3K6 86 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 PICK1Q9NRD5 415 aa13.42□□□□□ -0.26
SNX21-211ENST00000486336 FAM196BA6NMK8 535 aa13.41□□□□□ -0.26
SNX21-211ENST00000486336 PHF20L1A8MW92 1017 aa13.41□□□□□ -0.26
SNX21-211ENST00000486336 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
SNX21-211ENST00000486336 CRHR2Q13324 411 aa13.41□□□□□ -0.26
SNX21-211ENST00000486336 TAF1CQ15572 869 aaPredicted RBP13.41□□□□□ -0.26
SNX21-211ENST00000486336 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
SNX21-211ENST00000486336 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
SNX21-211ENST00000486336 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
SNX21-211ENST00000486336 SAP30BPQ9UHR5 308 aaKnown RBP13.41□□□□□ -0.26
SNX21-211ENST00000486336 MYO5AQ9Y4I1 1855 aaKnown RBP13.41□□□□□ -0.26
SNX21-211ENST00000486336 RFX7Q2KHR2 1363 aa13.41□□□□□ -0.26
SNX21-211ENST00000486336 IGSF3O75054 1194 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 USP5P45974 858 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 NOL9Q5SY16 702 aaKnown RBP13.4□□□□□ -0.26
SNX21-211ENST00000486336 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 FAM43AQ8N2R8 423 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNX21-211ENST00000486336 EDC3Q96F86 508 aaKnown RBP13.4□□□□□ -0.26
SNX21-211ENST00000486336 CFHR5Q9BXR6 569 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 ZFYVE28Q9HCC9 887 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 PCDHB15Q9Y5E8 787 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 ZHX2Q9Y6X8 837 aa13.4□□□□□ -0.26
SNX21-211ENST00000486336 MAGEB6P1A0A0J9YX57 407 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 BTBD19C9JJ37 291 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 TBC1D12O60347 775 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 CTNND1O60716 968 aaKnown RBP13.39□□□□□ -0.27
SNX21-211ENST00000486336 ATP5JP18859 108 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
SNX21-211ENST00000486336 DHX36Q9H2U1 1008 aaKnown RBP13.39□□□□□ -0.27
SNX21-211ENST00000486336 PAG1Q9NWQ8 432 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 PI4KBQ9UBF8 816 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 PALD1Q9ULE6 856 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 ATRNL1Q5VV63 1379 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 FLT1P17948 1338 aa13.39□□□□□ -0.27
SNX21-211ENST00000486336 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
SNX21-211ENST00000486336 PDE6AP16499 860 aa13.38□□□□□ -0.27
SNX21-211ENST00000486336 PTPRAP18433 802 aa13.38□□□□□ -0.27
SNX21-211ENST00000486336 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms