RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 SYN1P17600 705 aa11.59□□□□□ -0.55
CCDC142-208ENST00000486335 MAGEA10P43363 369 aaPredicted RBP11.59□□□□□ -0.55
CCDC142-208ENST00000486335 MAP3K10Q02779 954 aa11.59□□□□□ -0.55
CCDC142-208ENST00000486335 SLFN5Q08AF3 891 aa11.59□□□□□ -0.55
CCDC142-208ENST00000486335 TCP10Q12799 353 aa11.59□□□□□ -0.55
CCDC142-208ENST00000486335 ANKRD44Q8N8A2 993 aa11.59□□□□□ -0.55
CCDC142-208ENST00000486335 TBC1D22AQ8WUA7 517 aa11.59□□□□□ -0.55
CCDC142-208ENST00000486335 PARK7Q99497 189 aaKnown RBP11.59□□□□□ -0.55
CCDC142-208ENST00000486335 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
CCDC142-208ENST00000486335 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.59□□□□□ -0.55
CCDC142-208ENST00000486335 DAGLAQ9Y4D2 1042 aa11.59□□□□□ -0.55
CCDC142-208ENST00000486335 PRUNE2Q8WUY3 3088 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 MGAMO43451 1857 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 PTPRAP18433 802 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 DIXDC1Q155Q3 683 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 RABL6Q3YEC7 729 aaPredicted RBP11.58□□□□□ -0.56
CCDC142-208ENST00000486335 TAF7LQ5H9L4 462 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 C7orf61Q8IZ16 206 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 SUGT1Q9Y2Z0 365 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 ZHX2Q9Y6X8 837 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 UTYO14607 1347 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 MROH5Q6ZUA9 1318 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 FANCIQ9NVI1 1328 aa11.58□□□□□ -0.56
CCDC142-208ENST00000486335 MUC3AQ02505 3323 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 E9PSI1 815 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 PDE8BO95263 885 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 NECAB2Q7Z6G3 386 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
CCDC142-208ENST00000486335 KLHDC4Q8TBB5 520 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC142-208ENST00000486335 SLC45A1Q9Y2W3 748 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 PFASO15067 1338 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 IL16Q14005 1332 aa11.57□□□□□ -0.56
CCDC142-208ENST00000486335 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
CCDC142-208ENST00000486335 CAPN2P17655 700 aa11.56□□□□□ -0.56
CCDC142-208ENST00000486335 EXOSC9Q06265 439 aaKnown RBP11.56□□□□□ -0.56
CCDC142-208ENST00000486335 SCYL3Q8IZE3 742 aa11.56□□□□□ -0.56
CCDC142-208ENST00000486335 TDHQ8IZJ6 230 aa11.56□□□□□ -0.56
CCDC142-208ENST00000486335 BICC1Q9H694 974 aaKnown RBP11.56□□□□□ -0.56
CCDC142-208ENST00000486335 TMOD2Q9NZR1 351 aa11.56□□□□□ -0.56
CCDC142-208ENST00000486335 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
CCDC142-208ENST00000486335 TNPO2O14787 897 aaKnown RBP11.55□□□□□ -0.56
CCDC142-208ENST00000486335 ALDH1L1O75891 902 aa11.55□□□□□ -0.56
CCDC142-208ENST00000486335 PRDX5P30044 214 aa11.55□□□□□ -0.56
CCDC142-208ENST00000486335 RFX5P48382 616 aaPredicted RBP11.55□□□□□ -0.56
CCDC142-208ENST00000486335 TREML2Q5T2D2 321 aa11.55□□□□□ -0.56
CCDC142-208ENST00000486335 FASTKD5Q7L8L6 764 aaKnown RBP11.55□□□□□ -0.56
CCDC142-208ENST00000486335 VPS37DQ86XT2 251 aa11.55□□□□□ -0.56
CCDC142-208ENST00000486335 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC142-208ENST00000486335 ANKRD13CQ8N6S4 541 aa11.55□□□□□ -0.56
CCDC142-208ENST00000486335 DDX4Q9NQI0 724 aaKnown RBP11.55□□□□□ -0.56
CCDC142-208ENST00000486335 OGDHLQ9ULD0 1010 aa11.55□□□□□ -0.56
CCDC142-208ENST00000486335 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 PEX10O60683 326 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 COL6A1P12109 1028 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 RRP1BQ14684 758 aaKnown RBP11.54□□□□□ -0.56
CCDC142-208ENST00000486335 CAVIN4Q5BKX8 364 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 METTL24Q5JXM2 366 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 MAP3K21Q5TCX8 1036 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 ANKLE1Q8NAG6 615 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 USP40Q9NVE5 1235 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 C9orf78Q9NZ63 289 aaPredicted RBP11.54□□□□□ -0.56
CCDC142-208ENST00000486335 KIF16BQ96L93 1317 aa11.54□□□□□ -0.56
CCDC142-208ENST00000486335 GADL1Q6ZQY3 521 aa11.53□□□□□ -0.56
CCDC142-208ENST00000486335 TRIB2Q92519 343 aa11.53□□□□□ -0.56
CCDC142-208ENST00000486335 IDI2Q9BXS1 227 aa11.53□□□□□ -0.56
CCDC142-208ENST00000486335 NBPF3Q9H094 633 aa11.53□□□□□ -0.56
CCDC142-208ENST00000486335 MAST3O60307 1309 aa11.53□□□□□ -0.56
CCDC142-208ENST00000486335 RPTORQ8N122 1335 aa11.53□□□□□ -0.56
CCDC142-208ENST00000486335 COL2A1P02458 1487 aaPredicted RBP11.52□□□□□ -0.56
CCDC142-208ENST00000486335 PHIPQ8WWQ0 1821 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 FRAT2O75474 233 aaPredicted RBP11.52□□□□□ -0.57
CCDC142-208ENST00000486335 RGS3P49796 1198 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 FAM110CQ1W6H9 321 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 LHX8Q68G74 356 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 FAM109BQ6ICB4 259 aaPredicted RBP11.52□□□□□ -0.57
CCDC142-208ENST00000486335 ATG9AQ7Z3C6 839 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 WDR66Q8TBY9 1149 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 UBE2OQ9C0C9 1292 aaKnown RBP11.52□□□□□ -0.57
CCDC142-208ENST00000486335 SRCIN1Q9C0H9 1055 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 C11orf49Q9H6J7 331 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 TAOK2Q9UL54 1235 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 AGTPBP1Q9UPW5 1226 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 CACNA1FO60840 1977 aa11.52□□□□□ -0.57
CCDC142-208ENST00000486335 PTPRFP10586 1907 aa11.51□□□□□ -0.57
CCDC142-208ENST00000486335 HMGCRP04035 888 aa11.51□□□□□ -0.57
CCDC142-208ENST00000486335 LRRC26Q2I0M4 334 aa11.51□□□□□ -0.57
CCDC142-208ENST00000486335 ZNF384Q8TF68 577 aa11.51□□□□□ -0.57
CCDC142-208ENST00000486335 COA7Q96BR5 231 aa11.51□□□□□ -0.57
CCDC142-208ENST00000486335 PLXNB2O15031 1838 aa11.51□□□□□ -0.57
CCDC142-208ENST00000486335 CTNND1O60716 968 aaKnown RBP11.5□□□□□ -0.57
CCDC142-208ENST00000486335 ENTPD3O75355 529 aa11.5□□□□□ -0.57
CCDC142-208ENST00000486335 PUM3Q15397 648 aaKnown RBP11.5□□□□□ -0.57
CCDC142-208ENST00000486335 SLC4A10Q6U841 1118 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms